RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
SPARCL1-202ENST00000418378 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
SPARCL1-202ENST00000418378 POLA1P09884 1462 aaPredicted RBP8.67□□□□□ -1.02
SPARCL1-202ENST00000418378 CARMIL1Q5VZK9 1371 aa8.66□□□□□ -1.02
SPARCL1-202ENST00000418378 IGF1RP08069 1367 aa8.66□□□□□ -1.02
SPARCL1-202ENST00000418378 TNIKQ9UKE5 1360 aa8.65□□□□□ -1.02
SPARCL1-202ENST00000418378 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SPARCL1-202ENST00000418378 KANK4Q5T7N3 995 aaPredicted RBP8.62□□□□□ -1.03
SPARCL1-202ENST00000418378 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
SPARCL1-202ENST00000418378 ZNF608Q9ULD9 1512 aaPredicted RBP8.61□□□□□ -1.03
SPARCL1-202ENST00000418378 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
SPARCL1-202ENST00000418378 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-202ENST00000418378 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-202ENST00000418378 DNMBPQ6XZF7 1577 aa8.58□□□□□ -1.04
SPARCL1-202ENST00000418378 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
SPARCL1-202ENST00000418378 FHOD3Q2V2M9 1422 aa8.57□□□□□ -1.04
SPARCL1-202ENST00000418378 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
SPARCL1-202ENST00000418378 HRCP23327 699 aa8.56□□□□□ -1.04
SPARCL1-202ENST00000418378 PRXQ9BXM0 1461 aa8.56□□□□□ -1.04
SPARCL1-202ENST00000418378 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
SPARCL1-202ENST00000418378 FAM50AQ14320 339 aaKnown RBP8.55□□□□□ -1.04
SPARCL1-202ENST00000418378 C14orf37Q86TY3 774 aa8.55□□□□□ -1.04
SPARCL1-202ENST00000418378 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
SPARCL1-202ENST00000418378 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
SPARCL1-202ENST00000418378 KIF21BO75037 1637 aa8.52□□□□□ -1.04
SPARCL1-202ENST00000418378 GTF3C3Q9Y5Q9 886 aa8.52□□□□□ -1.04
SPARCL1-202ENST00000418378 ABCA10Q8WWZ4 1543 aa8.51□□□□□ -1.05
SPARCL1-202ENST00000418378 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
SPARCL1-202ENST00000418378 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
SPARCL1-202ENST00000418378 BCANQ96GW7 911 aa8.48□□□□□ -1.05
SPARCL1-202ENST00000418378 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
SPARCL1-202ENST00000418378 HAP1P54257 671 aaPredicted RBP8.48□□□□□ -1.05
SPARCL1-202ENST00000418378 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
SPARCL1-202ENST00000418378 CHIC2Q9UKJ5 165 aa8.46□□□□□ -1.06
SPARCL1-202ENST00000418378 ZNF777Q9ULD5 760 aaPredicted RBP8.45□□□□□ -1.06
SPARCL1-202ENST00000418378 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
SPARCL1-202ENST00000418378 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
SPARCL1-202ENST00000418378 JPH4Q96JJ6 628 aa8.42□□□□□ -1.06
SPARCL1-202ENST00000418378 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
SPARCL1-202ENST00000418378 IFT140Q96RY7 1462 aa8.41□□□□□ -1.06
SPARCL1-202ENST00000418378 MTUS2Q5JR59 1369 aa8.41□□□□□ -1.06
SPARCL1-202ENST00000418378 KCNH8Q96L42 1107 aa8.41□□□□□ -1.06
SPARCL1-202ENST00000418378 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
SPARCL1-202ENST00000418378 WDR62O43379 1518 aa8.39□□□□□ -1.07
SPARCL1-202ENST00000418378 DHX37Q8IY37 1157 aaKnown RBP8.39□□□□□ -1.07
SPARCL1-202ENST00000418378 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
SPARCL1-202ENST00000418378 ABCA5Q8WWZ7 1642 aa8.39□□□□□ -1.07
SPARCL1-202ENST00000418378 THOC2Q8NI27 1593 aaKnown RBP8.38□□□□□ -1.07
SPARCL1-202ENST00000418378 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
SPARCL1-202ENST00000418378 NEUROD1Q13562 356 aa8.38□□□□□ -1.07
SPARCL1-202ENST00000418378 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
SPARCL1-202ENST00000418378 RRP7BPQ9NSQ0 103 aa8.37□□□□□ -1.07
SPARCL1-202ENST00000418378 UBE2Q2Q8WVN8 375 aa8.37□□□□□ -1.07
SPARCL1-202ENST00000418378 PHLDB1Q86UU1 1377 aa8.36□□□□□ -1.07
SPARCL1-202ENST00000418378 WDR97A6NE52 1622 aa8.36□□□□□ -1.07
SPARCL1-202ENST00000418378 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-202ENST00000418378 PDE4CQ08493 712 aa8.36□□□□□ -1.07
SPARCL1-202ENST00000418378 ZNF644Q9H582 1327 aaPredicted RBP8.35□□□□□ -1.07
SPARCL1-202ENST00000418378 CDK13Q14004 1512 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-202ENST00000418378 GRIN2AQ12879 1464 aa8.34□□□□□ -1.07
SPARCL1-202ENST00000418378 CUL7Q14999 1698 aa8.34□□□□□ -1.07
SPARCL1-202ENST00000418378 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
SPARCL1-202ENST00000418378 ADAMTS12P58397 1594 aa8.33□□□□□ -1.08
SPARCL1-202ENST00000418378 PLB1Q6P1J6 1458 aa8.32□□□□□ -1.08
SPARCL1-202ENST00000418378 CTTNBP2Q8WZ74 1663 aa8.32□□□□□ -1.08
SPARCL1-202ENST00000418378 TRIM52Q96A61 297 aa8.32□□□□□ -1.08
SPARCL1-202ENST00000418378 CCNB3Q8WWL7 1395 aa8.32□□□□□ -1.08
SPARCL1-202ENST00000418378 IQGAP2Q13576 1575 aa8.32□□□□□ -1.08
SPARCL1-202ENST00000418378 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
SPARCL1-202ENST00000418378 TMEM132AQ24JP5 1023 aa8.31□□□□□ -1.08
SPARCL1-202ENST00000418378 FMN1Q68DA7 1419 aa8.31□□□□□ -1.08
SPARCL1-202ENST00000418378 PKNOX2Q96KN3 472 aa8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 SYNJ2O15056 1496 aa8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 PRG4Q92954 1404 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 FOXD1Q16676 465 aa8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 SIN3AQ96ST3 1273 aa8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 HIRIP3Q9BW71 556 aaPredicted RBP8.3□□□□□ -1.08
SPARCL1-202ENST00000418378 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
SPARCL1-202ENST00000418378 PHF23Q9BUL5 403 aaPredicted RBP8.29□□□□□ -1.08
SPARCL1-202ENST00000418378 CEP170Q5SW79 1584 aa8.28□□□□□ -1.08
SPARCL1-202ENST00000418378 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-202ENST00000418378 TIAM1Q13009 1591 aa8.28□□□□□ -1.08
SPARCL1-202ENST00000418378 PLEKHD1A6NEE1 506 aa8.27□□□□□ -1.09
SPARCL1-202ENST00000418378 CFDP1Q9UEE9 299 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-202ENST00000418378 KIAA0586Q9BVV6 1533 aa8.26□□□□□ -1.09
SPARCL1-202ENST00000418378 CASKIN1Q8WXD9 1431 aa8.26□□□□□ -1.09
SPARCL1-202ENST00000418378 CYB5RLQ6IPT4 315 aa8.26□□□□□ -1.09
SPARCL1-202ENST00000418378 BCL11BQ9C0K0 894 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 ANO8Q9HCE9 1232 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 CDK11AQ9UQ88 783 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 ERCC6L2Q5T890 1561 aa8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 PTPRGP23470 1445 aa8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 ZEB1P37275 1124 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 DISP1Q96F81 1524 aa8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 SENP3Q9H4L4 574 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 PPP6R1Q9UPN7 881 aa8.25□□□□□ -1.09
SPARCL1-202ENST00000418378 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
SPARCL1-202ENST00000418378 CHD1O14646 1710 aa8.24□□□□□ -1.09
SPARCL1-202ENST00000418378 RAB3GAP2Q9H2M9 1393 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms