RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 NISCHQ9Y2I1 1504 aa12.06□□□□□ -0.48
SPARCL1-202ENST00000418378 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
SPARCL1-202ENST00000418378 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
SPARCL1-202ENST00000418378 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
SPARCL1-202ENST00000418378 ABCC9O60706 1549 aa10.26□□□□□ -0.77
SPARCL1-202ENST00000418378 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
SPARCL1-202ENST00000418378 CCDC180Q9P1Z9 1646 aa10.21□□□□□ -0.78
SPARCL1-202ENST00000418378 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
SPARCL1-202ENST00000418378 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
SPARCL1-202ENST00000418378 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPARCL1-202ENST00000418378 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
SPARCL1-202ENST00000418378 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
SPARCL1-202ENST00000418378 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
SPARCL1-202ENST00000418378 MYT1Q01538 1121 aa9.68□□□□□ -0.86
SPARCL1-202ENST00000418378 PLPPR3Q6T4P5 718 aa9.66□□□□□ -0.86
SPARCL1-202ENST00000418378 DCAF1Q9Y4B6 1507 aa9.64□□□□□ -0.87
SPARCL1-202ENST00000418378 PELP1Q8IZL8 1130 aaKnown RBP9.63□□□□□ -0.87
SPARCL1-202ENST00000418378 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
SPARCL1-202ENST00000418378 NACADO15069 1562 aa9.61□□□□□ -0.87
SPARCL1-202ENST00000418378 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
SPARCL1-202ENST00000418378 APLP2Q06481 763 aa9.6□□□□□ -0.87
SPARCL1-202ENST00000418378 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
SPARCL1-202ENST00000418378 FAM9AQ8IZU1 332 aaPredicted RBP9.54□□□□□ -0.88
SPARCL1-202ENST00000418378 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
SPARCL1-202ENST00000418378 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
SPARCL1-202ENST00000418378 CHIC1Q5VXU3 224 aa9.48□□□□□ -0.89
SPARCL1-202ENST00000418378 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
SPARCL1-202ENST00000418378 MROH2BQ7Z745 1585 aa9.46□□□□□ -0.89
SPARCL1-202ENST00000418378 UNC13AQ9UPW8 1703 aa9.46□□□□□ -0.9
SPARCL1-202ENST00000418378 MYO15BQ96JP2 1530 aa9.43□□□□□ -0.9
SPARCL1-202ENST00000418378 WIZO95785 1651 aa9.41□□□□□ -0.9
SPARCL1-202ENST00000418378 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.9
SPARCL1-202ENST00000418378 TRIM41Q8WV44 630 aa9.38□□□□□ -0.91
SPARCL1-202ENST00000418378 BICRAQ9NZM4 1560 aa9.35□□□□□ -0.91
SPARCL1-202ENST00000418378 NCBP3Q53F19 620 aaKnown RBP9.35□□□□□ -0.91
SPARCL1-202ENST00000418378 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.92
SPARCL1-202ENST00000418378 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
SPARCL1-202ENST00000418378 DNAJC5BQ9UF47 199 aa9.25□□□□□ -0.93
SPARCL1-202ENST00000418378 SMARCA4P51532 1647 aa9.25□□□□□ -0.93
SPARCL1-202ENST00000418378 PPARGC1BQ86YN6 1023 aaKnown RBP9.22□□□□□ -0.93
SPARCL1-202ENST00000418378 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
SPARCL1-202ENST00000418378 ABCC8Q09428 1581 aa9.18□□□□□ -0.94
SPARCL1-202ENST00000418378 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
SPARCL1-202ENST00000418378 TIMELESSQ9UNS1 1208 aa9.17□□□□□ -0.94
SPARCL1-202ENST00000418378 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
SPARCL1-202ENST00000418378 EIF5BO60841 1220 aaKnown RBP9.15□□□□□ -0.95
SPARCL1-202ENST00000418378 EIF4G1Q04637 1599 aaKnown RBP9.13□□□□□ -0.95
SPARCL1-202ENST00000418378 TOP2AP11388 1531 aaKnown RBP9.1□□□□□ -0.95
SPARCL1-202ENST00000418378 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
SPARCL1-202ENST00000418378 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
SPARCL1-202ENST00000418378 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
SPARCL1-202ENST00000418378 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
SPARCL1-202ENST00000418378 PCGF6Q9BYE7 350 aa9.06□□□□□ -0.96
SPARCL1-202ENST00000418378 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
SPARCL1-202ENST00000418378 SOGA1O94964 1423 aa9.02□□□□□ -0.97
SPARCL1-202ENST00000418378 RUSC2Q8N2Y8 1516 aa9.02□□□□□ -0.97
SPARCL1-202ENST00000418378 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
SPARCL1-202ENST00000418378 NESP48681 1621 aa9□□□□□ -0.97
SPARCL1-202ENST00000418378 KCNA4P22459 653 aa8.98□□□□□ -0.97
SPARCL1-202ENST00000418378 ARXQ96QS3 562 aa8.98□□□□□ -0.97
SPARCL1-202ENST00000418378 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
SPARCL1-202ENST00000418378 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
SPARCL1-202ENST00000418378 NCAPD3P42695 1498 aa8.94□□□□□ -0.98
SPARCL1-202ENST00000418378 CSRNP3Q8WYN3 585 aa8.93□□□□□ -0.98
SPARCL1-202ENST00000418378 AMER1Q5JTC6 1135 aaPredicted RBP8.91□□□□□ -0.98
SPARCL1-202ENST00000418378 AEBP2Q6ZN18 517 aaPredicted RBP8.91□□□□□ -0.98
SPARCL1-202ENST00000418378 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.98
SPARCL1-202ENST00000418378 SYNJ1O43426 1573 aa8.9□□□□□ -0.98
SPARCL1-202ENST00000418378 ATP1B4Q9UN42 357 aaPredicted RBP8.89□□□□□ -0.99
SPARCL1-202ENST00000418378 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
SPARCL1-202ENST00000418378 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
SPARCL1-202ENST00000418378 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
SPARCL1-202ENST00000418378 FBLN2P98095 1184 aa8.82□□□□□ -1
SPARCL1-202ENST00000418378 PODXL2Q9NZ53 605 aa8.82□□□□□ -1
SPARCL1-202ENST00000418378 FANCD2Q9BXW9 1451 aa8.82□□□□□ -1
SPARCL1-202ENST00000418378 ARID3CA6NKF2 412 aa8.82□□□□□ -1
SPARCL1-202ENST00000418378 CFTRP13569 1480 aa8.81□□□□□ -1
SPARCL1-202ENST00000418378 RAD54L2Q9Y4B4 1467 aa8.81□□□□□ -1
SPARCL1-202ENST00000418378 TDRD9Q8NDG6 1382 aaKnown RBP8.81□□□□□ -1
SPARCL1-202ENST00000418378 CUX1P39880 1505 aa8.8□□□□□ -1
SPARCL1-202ENST00000418378 CUX2O14529 1486 aa8.78□□□□□ -1
SPARCL1-202ENST00000418378 TAOK2Q9UL54 1235 aa8.78□□□□□ -1
SPARCL1-202ENST00000418378 RAPGEF2Q9Y4G8 1499 aa8.77□□□□□ -1.01
SPARCL1-202ENST00000418378 CEP162Q5TB80 1403 aa8.75□□□□□ -1.01
SPARCL1-202ENST00000418378 FGD5Q6ZNL6 1462 aa8.75□□□□□ -1.01
SPARCL1-202ENST00000418378 ERCC6Q03468 1493 aa8.75□□□□□ -1.01
SPARCL1-202ENST00000418378 ITGAEP38570 1179 aa8.74□□□□□ -1.01
SPARCL1-202ENST00000418378 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
SPARCL1-202ENST00000418378 CEP164Q9UPV0 1460 aa8.72□□□□□ -1.01
SPARCL1-202ENST00000418378 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
SPARCL1-202ENST00000418378 HNRNPUL2Q1KMD3 747 aaKnown RBP8.72□□□□□ -1.01
SPARCL1-202ENST00000418378 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
SPARCL1-202ENST00000418378 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
SPARCL1-202ENST00000418378 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
SPARCL1-202ENST00000418378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
SPARCL1-202ENST00000418378 GOLGA3Q08378 1498 aa8.69□□□□□ -1.02
SPARCL1-202ENST00000418378 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
SPARCL1-202ENST00000418378 CLIP1P30622 1438 aa8.68□□□□□ -1.02
SPARCL1-202ENST00000418378 AQRO60306 1485 aaKnown RBP eCLIP8.68□□□□□ -1.02
SPARCL1-202ENST00000418378 URB2Q14146 1524 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms