RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
SEC22C-205ENST00000417572 KIAA0586Q9BVV6 1533 aa21.1■□□□□ 0.97
SEC22C-205ENST00000417572 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
SEC22C-205ENST00000417572 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
SEC22C-205ENST00000417572 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
SEC22C-205ENST00000417572 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
SEC22C-205ENST00000417572 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
SEC22C-205ENST00000417572 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
SEC22C-205ENST00000417572 UGGT2Q9NYU1 1516 aa20.93■□□□□ 0.94
SEC22C-205ENST00000417572 PRG4Q92954 1404 aaPredicted RBP20.92■□□□□ 0.94
SEC22C-205ENST00000417572 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
SEC22C-205ENST00000417572 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
SEC22C-205ENST00000417572 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
SEC22C-205ENST00000417572 DISP1Q96F81 1524 aa20.87■□□□□ 0.93
SEC22C-205ENST00000417572 CLIP1P30622 1438 aa20.86■□□□□ 0.93
SEC22C-205ENST00000417572 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
SEC22C-205ENST00000417572 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
SEC22C-205ENST00000417572 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.92
SEC22C-205ENST00000417572 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
SEC22C-205ENST00000417572 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
SEC22C-205ENST00000417572 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
SEC22C-205ENST00000417572 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
SEC22C-205ENST00000417572 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
SEC22C-205ENST00000417572 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
SEC22C-205ENST00000417572 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.92
SEC22C-205ENST00000417572 PTPRGP23470 1445 aa20.74■□□□□ 0.91
SEC22C-205ENST00000417572 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
SEC22C-205ENST00000417572 RIMBP3CA6NJZ7 1639 aa20.73■□□□□ 0.91
SEC22C-205ENST00000417572 RIMBP3BA6NNM3 1639 aa20.73■□□□□ 0.91
SEC22C-205ENST00000417572 RIMBP3Q9UFD9 1639 aa20.73■□□□□ 0.91
SEC22C-205ENST00000417572 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
SEC22C-205ENST00000417572 FMN1Q68DA7 1419 aa20.64■□□□□ 0.89
SEC22C-205ENST00000417572 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
SEC22C-205ENST00000417572 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
SEC22C-205ENST00000417572 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
SEC22C-205ENST00000417572 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.88
SEC22C-205ENST00000417572 ABCA8O94911 1581 aa20.56■□□□□ 0.88
SEC22C-205ENST00000417572 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
SEC22C-205ENST00000417572 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
SEC22C-205ENST00000417572 UHRF1BP1LA0JNW5 1464 aa20.52■□□□□ 0.88
SEC22C-205ENST00000417572 ARID3CA6NKF2 412 aa20.52■□□□□ 0.87
SEC22C-205ENST00000417572 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
SEC22C-205ENST00000417572 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
SEC22C-205ENST00000417572 ADCY10Q96PN6 1610 aa20.49■□□□□ 0.87
SEC22C-205ENST00000417572 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
SEC22C-205ENST00000417572 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
SEC22C-205ENST00000417572 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
SEC22C-205ENST00000417572 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEC22C-205ENST00000417572 ATP10BO94823 1461 aa20.45■□□□□ 0.86
SEC22C-205ENST00000417572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
SEC22C-205ENST00000417572 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
SEC22C-205ENST00000417572 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
SEC22C-205ENST00000417572 KDM5BQ9UGL1 1544 aa20.42■□□□□ 0.86
SEC22C-205ENST00000417572 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
SEC22C-205ENST00000417572 APLP2Q06481 763 aa20.39■□□□□ 0.85
SEC22C-205ENST00000417572 LRRIQ1Q96JM4 1722 aa20.37■□□□□ 0.85
SEC22C-205ENST00000417572 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
SEC22C-205ENST00000417572 ZCCHC11Q5TAX3 1644 aaKnown RBP20.36■□□□□ 0.85
SEC22C-205ENST00000417572 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
SEC22C-205ENST00000417572 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-205ENST00000417572 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-205ENST00000417572 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
SEC22C-205ENST00000417572 TIAM1Q13009 1591 aa20.3■□□□□ 0.84
SEC22C-205ENST00000417572 ASXL2Q76L83 1435 aa20.3■□□□□ 0.84
SEC22C-205ENST00000417572 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.83
SEC22C-205ENST00000417572 KCNH8Q96L42 1107 aa20.27■□□□□ 0.83
SEC22C-205ENST00000417572 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.83
SEC22C-205ENST00000417572 MAGI3Q5TCQ9 1506 aa20.26■□□□□ 0.83
SEC22C-205ENST00000417572 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
SEC22C-205ENST00000417572 MAPKBP1O60336 1514 aa20.26■□□□□ 0.83
SEC22C-205ENST00000417572 LRRC9Q6ZRR7 1453 aa20.25■□□□□ 0.83
SEC22C-205ENST00000417572 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
SEC22C-205ENST00000417572 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
SEC22C-205ENST00000417572 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
SEC22C-205ENST00000417572 FAM69CQ0P6D2 419 aa20.15■□□□□ 0.82
SEC22C-205ENST00000417572 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
SEC22C-205ENST00000417572 KIF14Q15058 1648 aa20.13■□□□□ 0.81
SEC22C-205ENST00000417572 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
SEC22C-205ENST00000417572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
SEC22C-205ENST00000417572 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
SEC22C-205ENST00000417572 SUPT6HQ7KZ85 1726 aaKnown RBP20.09■□□□□ 0.81
SEC22C-205ENST00000417572 DIP2BQ9P265 1576 aa20.09■□□□□ 0.81
SEC22C-205ENST00000417572 GLI2P10070 1586 aa20.07■□□□□ 0.8
SEC22C-205ENST00000417572 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
SEC22C-205ENST00000417572 PHLDB1Q86UU1 1377 aa20.06■□□□□ 0.8
SEC22C-205ENST00000417572 TTC37Q6PGP7 1564 aa20.05■□□□□ 0.8
SEC22C-205ENST00000417572 ABCA9Q8IUA7 1624 aa20.05■□□□□ 0.8
SEC22C-205ENST00000417572 CD109Q6YHK3 1445 aa20.05■□□□□ 0.8
SEC22C-205ENST00000417572 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
SEC22C-205ENST00000417572 PLCH2O75038 1416 aa20.02■□□□□ 0.8
SEC22C-205ENST00000417572 KIF13AQ9H1H9 1805 aa20.01■□□□□ 0.79
SEC22C-205ENST00000417572 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
SEC22C-205ENST00000417572 MYOM3Q5VTT5 1437 aa19.99■□□□□ 0.79
SEC22C-205ENST00000417572 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
SEC22C-205ENST00000417572 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
SEC22C-205ENST00000417572 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
SEC22C-205ENST00000417572 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
SEC22C-205ENST00000417572 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
SEC22C-205ENST00000417572 ARHGAP5Q13017 1502 aa19.94■□□□□ 0.78
SEC22C-205ENST00000417572 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms