RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
SEC22C-205ENST00000417572 CCDC180Q9P1Z9 1646 aa26.92■■□□□ 1.9
SEC22C-205ENST00000417572 ABCC9O60706 1549 aa26.03■■□□□ 1.76
SEC22C-205ENST00000417572 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
SEC22C-205ENST00000417572 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
SEC22C-205ENST00000417572 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
SEC22C-205ENST00000417572 NACADO15069 1562 aa25.26■■□□□ 1.63
SEC22C-205ENST00000417572 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
SEC22C-205ENST00000417572 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
SEC22C-205ENST00000417572 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
SEC22C-205ENST00000417572 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
SEC22C-205ENST00000417572 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
SEC22C-205ENST00000417572 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
SEC22C-205ENST00000417572 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
SEC22C-205ENST00000417572 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
SEC22C-205ENST00000417572 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
SEC22C-205ENST00000417572 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
SEC22C-205ENST00000417572 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
SEC22C-205ENST00000417572 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
SEC22C-205ENST00000417572 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
SEC22C-205ENST00000417572 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
SEC22C-205ENST00000417572 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
SEC22C-205ENST00000417572 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SEC22C-205ENST00000417572 WIZO95785 1651 aa23.38■■□□□ 1.33
SEC22C-205ENST00000417572 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
SEC22C-205ENST00000417572 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
SEC22C-205ENST00000417572 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
SEC22C-205ENST00000417572 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
SEC22C-205ENST00000417572 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
SEC22C-205ENST00000417572 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
SEC22C-205ENST00000417572 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
SEC22C-205ENST00000417572 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
SEC22C-205ENST00000417572 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
SEC22C-205ENST00000417572 NESP48681 1621 aa22.67■■□□□ 1.22
SEC22C-205ENST00000417572 CFTRP13569 1480 aa22.65■■□□□ 1.22
SEC22C-205ENST00000417572 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
SEC22C-205ENST00000417572 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
SEC22C-205ENST00000417572 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
SEC22C-205ENST00000417572 PRDM2Q13029 1718 aa22.39■■□□□ 1.18
SEC22C-205ENST00000417572 ERCC6Q03468 1493 aa22.37■■□□□ 1.17
SEC22C-205ENST00000417572 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
SEC22C-205ENST00000417572 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
SEC22C-205ENST00000417572 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
SEC22C-205ENST00000417572 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
SEC22C-205ENST00000417572 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
SEC22C-205ENST00000417572 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
SEC22C-205ENST00000417572 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
SEC22C-205ENST00000417572 CUX1P39880 1505 aa22.12■■□□□ 1.13
SEC22C-205ENST00000417572 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
SEC22C-205ENST00000417572 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
SEC22C-205ENST00000417572 WDR62O43379 1518 aa22.1■■□□□ 1.13
SEC22C-205ENST00000417572 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
SEC22C-205ENST00000417572 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
SEC22C-205ENST00000417572 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
SEC22C-205ENST00000417572 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
SEC22C-205ENST00000417572 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
SEC22C-205ENST00000417572 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
SEC22C-205ENST00000417572 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SEC22C-205ENST00000417572 CUX2O14529 1486 aa21.93■■□□□ 1.1
SEC22C-205ENST00000417572 SOGA1O94964 1423 aa21.92■■□□□ 1.1
SEC22C-205ENST00000417572 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
SEC22C-205ENST00000417572 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
SEC22C-205ENST00000417572 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
SEC22C-205ENST00000417572 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
SEC22C-205ENST00000417572 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
SEC22C-205ENST00000417572 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
SEC22C-205ENST00000417572 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■■■■■ 30.6
SEC22C-205ENST00000417572 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
SEC22C-205ENST00000417572 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
SEC22C-205ENST00000417572 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
SEC22C-205ENST00000417572 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
SEC22C-205ENST00000417572 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
SEC22C-205ENST00000417572 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
SEC22C-205ENST00000417572 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
SEC22C-205ENST00000417572 IGF1RP08069 1367 aa21.57■■□□□ 1.04
SEC22C-205ENST00000417572 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
SEC22C-205ENST00000417572 EEA1Q15075 1411 aa21.54■■□□□ 1.04
SEC22C-205ENST00000417572 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
SEC22C-205ENST00000417572 ERICH3Q5RHP9 1530 aa21.51■■□□□ 1.03
SEC22C-205ENST00000417572 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
SEC22C-205ENST00000417572 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
SEC22C-205ENST00000417572 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
SEC22C-205ENST00000417572 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
SEC22C-205ENST00000417572 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
SEC22C-205ENST00000417572 FBLN2P98095 1184 aa21.39■■□□□ 1.02
SEC22C-205ENST00000417572 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
SEC22C-205ENST00000417572 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
SEC22C-205ENST00000417572 CUL7Q14999 1698 aa21.37■■□□□ 1.01
SEC22C-205ENST00000417572 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
SEC22C-205ENST00000417572 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
SEC22C-205ENST00000417572 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1
SEC22C-205ENST00000417572 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
SEC22C-205ENST00000417572 GRIN2AQ12879 1464 aa21.28■■□□□ 1
SEC22C-205ENST00000417572 KIF21BO75037 1637 aa21.25■□□□□ 0.99
SEC22C-205ENST00000417572 CHD1O14646 1710 aa21.25■□□□□ 0.99
SEC22C-205ENST00000417572 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
SEC22C-205ENST00000417572 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
SEC22C-205ENST00000417572 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
SEC22C-205ENST00000417572 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
SEC22C-205ENST00000417572 NUP160Q12769 1436 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms