RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
TM9SF4-203ENST00000417389 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
TM9SF4-203ENST00000417389 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
TM9SF4-203ENST00000417389 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.55
TM9SF4-203ENST00000417389 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
TM9SF4-203ENST00000417389 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
TM9SF4-203ENST00000417389 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
TM9SF4-203ENST00000417389 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
TM9SF4-203ENST00000417389 EEA1Q15075 1411 aa18.37■□□□□ 0.53
TM9SF4-203ENST00000417389 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
TM9SF4-203ENST00000417389 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
TM9SF4-203ENST00000417389 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
TM9SF4-203ENST00000417389 CARMIL2Q6F5E8 1435 aa18.33■□□□□ 0.53
TM9SF4-203ENST00000417389 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
TM9SF4-203ENST00000417389 PTPRGP23470 1445 aa18.26■□□□□ 0.51
TM9SF4-203ENST00000417389 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
TM9SF4-203ENST00000417389 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
TM9SF4-203ENST00000417389 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
TM9SF4-203ENST00000417389 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
TM9SF4-203ENST00000417389 UGGT2Q9NYU1 1516 aa18.22■□□□□ 0.51
TM9SF4-203ENST00000417389 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
TM9SF4-203ENST00000417389 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
TM9SF4-203ENST00000417389 GOLGA3Q08378 1498 aa18.19■□□□□ 0.5
TM9SF4-203ENST00000417389 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
TM9SF4-203ENST00000417389 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
TM9SF4-203ENST00000417389 KIF21BO75037 1637 aa18.16■□□□□ 0.5
TM9SF4-203ENST00000417389 ADCY10Q96PN6 1610 aa18.13■□□□□ 0.49
TM9SF4-203ENST00000417389 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
TM9SF4-203ENST00000417389 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
TM9SF4-203ENST00000417389 UHRF1BP1LA0JNW5 1464 aa18.03■□□□□ 0.48
TM9SF4-203ENST00000417389 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
TM9SF4-203ENST00000417389 FAM69CQ0P6D2 419 aa18.03■□□□□ 0.48
TM9SF4-203ENST00000417389 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
TM9SF4-203ENST00000417389 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
TM9SF4-203ENST00000417389 SAMD9Q5K651 1589 aa18■□□□□ 0.47
TM9SF4-203ENST00000417389 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
TM9SF4-203ENST00000417389 ASXL2Q76L83 1435 aa17.97■□□□□ 0.47
TM9SF4-203ENST00000417389 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
TM9SF4-203ENST00000417389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
TM9SF4-203ENST00000417389 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
TM9SF4-203ENST00000417389 EFCAB5A4FU69 1503 aa17.96■□□□□ 0.47
TM9SF4-203ENST00000417389 ABCA8O94911 1581 aa17.95■□□□□ 0.46
TM9SF4-203ENST00000417389 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
TM9SF4-203ENST00000417389 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
TM9SF4-203ENST00000417389 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
TM9SF4-203ENST00000417389 DIP2BQ9P265 1576 aa17.91■□□□□ 0.46
TM9SF4-203ENST00000417389 KIF13AQ9H1H9 1805 aa17.91■□□□□ 0.46
TM9SF4-203ENST00000417389 KCNH8Q96L42 1107 aa17.9■□□□□ 0.46
TM9SF4-203ENST00000417389 RAPGEF6Q8TEU7 1601 aa17.89■□□□□ 0.45
TM9SF4-203ENST00000417389 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
TM9SF4-203ENST00000417389 WDR7Q9Y4E6 1490 aa17.86■□□□□ 0.45
TM9SF4-203ENST00000417389 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
TM9SF4-203ENST00000417389 EPRSP07814 1512 aaKnown RBP17.83■□□□□ 0.45
TM9SF4-203ENST00000417389 ATP10BO94823 1461 aa17.83■□□□□ 0.45
TM9SF4-203ENST00000417389 FMN1Q68DA7 1419 aa17.83■□□□□ 0.45
TM9SF4-203ENST00000417389 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
TM9SF4-203ENST00000417389 CLIP1P30622 1438 aa17.81■□□□□ 0.44
TM9SF4-203ENST00000417389 GLI2P10070 1586 aa17.79■□□□□ 0.44
TM9SF4-203ENST00000417389 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
TM9SF4-203ENST00000417389 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
TM9SF4-203ENST00000417389 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
TM9SF4-203ENST00000417389 CD109Q6YHK3 1445 aa17.73■□□□□ 0.43
TM9SF4-203ENST00000417389 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
TM9SF4-203ENST00000417389 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
TM9SF4-203ENST00000417389 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
TM9SF4-203ENST00000417389 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
TM9SF4-203ENST00000417389 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
TM9SF4-203ENST00000417389 KDM6BO15054 1643 aa17.7■□□□□ 0.42
TM9SF4-203ENST00000417389 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
TM9SF4-203ENST00000417389 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
TM9SF4-203ENST00000417389 CASKIN1Q8WXD9 1431 aa17.66■□□□□ 0.42
TM9SF4-203ENST00000417389 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
TM9SF4-203ENST00000417389 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
TM9SF4-203ENST00000417389 CCDC18Q5T9S5 1454 aa17.62■□□□□ 0.41
TM9SF4-203ENST00000417389 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
TM9SF4-203ENST00000417389 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
TM9SF4-203ENST00000417389 TROQ12816 1431 aaPredicted RBP17.56■□□□□ 0.4
TM9SF4-203ENST00000417389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
TM9SF4-203ENST00000417389 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
TM9SF4-203ENST00000417389 KIF14Q15058 1648 aa17.54■□□□□ 0.4
TM9SF4-203ENST00000417389 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
TM9SF4-203ENST00000417389 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
TM9SF4-203ENST00000417389 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
TM9SF4-203ENST00000417389 FANCAO15360 1455 aa17.51■□□□□ 0.39
TM9SF4-203ENST00000417389 NEO1Q92859 1461 aa17.5■□□□□ 0.39
TM9SF4-203ENST00000417389 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
TM9SF4-203ENST00000417389 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
TM9SF4-203ENST00000417389 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
TM9SF4-203ENST00000417389 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
TM9SF4-203ENST00000417389 CFAP74Q9C0B2 1584 aa17.48■□□□□ 0.39
TM9SF4-203ENST00000417389 PLCH2O75038 1416 aa17.47■□□□□ 0.39
TM9SF4-203ENST00000417389 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
TM9SF4-203ENST00000417389 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
TM9SF4-203ENST00000417389 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
TM9SF4-203ENST00000417389 ARHGAP5Q13017 1502 aa17.46■□□□□ 0.39
TM9SF4-203ENST00000417389 MYO5CQ9NQX4 1742 aa17.45■□□□□ 0.38
TM9SF4-203ENST00000417389 APLP2Q06481 763 aa17.44■□□□□ 0.38
TM9SF4-203ENST00000417389 DENND4BO75064 1496 aaPredicted RBP17.44■□□□□ 0.38
TM9SF4-203ENST00000417389 ADGRL1O94910 1474 aa17.43■□□□□ 0.38
TM9SF4-203ENST00000417389 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms