RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.444e-7■■■□□ 18.1
SCAF8-203ENST00000417268 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
SCAF8-203ENST00000417268 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
SCAF8-203ENST00000417268 TONSLQ96HA7 1378 aa17.77■□□□□ 0.44
SCAF8-203ENST00000417268 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
SCAF8-203ENST00000417268 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
SCAF8-203ENST00000417268 RRP7BPQ9NSQ0 103 aa17.71■□□□□ 0.42
SCAF8-203ENST00000417268 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
SCAF8-203ENST00000417268 ANP32CO43423 234 aa17.68■□□□□ 0.42
SCAF8-203ENST00000417268 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
SCAF8-203ENST00000417268 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
SCAF8-203ENST00000417268 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
SCAF8-203ENST00000417268 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.41
SCAF8-203ENST00000417268 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
SCAF8-203ENST00000417268 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
SCAF8-203ENST00000417268 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
SCAF8-203ENST00000417268 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
SCAF8-203ENST00000417268 FKBP8Q14318 412 aa17.6■□□□□ 0.41
SCAF8-203ENST00000417268 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
SCAF8-203ENST00000417268 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
SCAF8-203ENST00000417268 CFTRP13569 1480 aa17.58■□□□□ 0.41
SCAF8-203ENST00000417268 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
SCAF8-203ENST00000417268 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
SCAF8-203ENST00000417268 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
SCAF8-203ENST00000417268 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
SCAF8-203ENST00000417268 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
SCAF8-203ENST00000417268 MIER1Q8N108 512 aa17.5■□□□□ 0.39
SCAF8-203ENST00000417268 IGF1RP08069 1367 aa17.49■□□□□ 0.39
SCAF8-203ENST00000417268 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
SCAF8-203ENST00000417268 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
SCAF8-203ENST00000417268 NESP48681 1621 aa17.47■□□□□ 0.39
SCAF8-203ENST00000417268 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.39
SCAF8-203ENST00000417268 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
SCAF8-203ENST00000417268 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
SCAF8-203ENST00000417268 NEFMP07197 916 aa17.45■□□□□ 0.38
SCAF8-203ENST00000417268 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
SCAF8-203ENST00000417268 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
SCAF8-203ENST00000417268 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
SCAF8-203ENST00000417268 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
SCAF8-203ENST00000417268 PPP1R15AO75807 674 aaPredicted RBP17.41■□□□□ 0.38
SCAF8-203ENST00000417268 ANP32EQ9BTT0 268 aa17.4■□□□□ 0.38
SCAF8-203ENST00000417268 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.388e-7■■■■□ 22.5
SCAF8-203ENST00000417268 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
SCAF8-203ENST00000417268 PTPRGP23470 1445 aa17.38■□□□□ 0.37
SCAF8-203ENST00000417268 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
SCAF8-203ENST00000417268 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCAF8-203ENST00000417268 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
SCAF8-203ENST00000417268 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
SCAF8-203ENST00000417268 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
SCAF8-203ENST00000417268 KANK1Q14678 1352 aa17.33■□□□□ 0.37
SCAF8-203ENST00000417268 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.36
SCAF8-203ENST00000417268 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
SCAF8-203ENST00000417268 NBR1Q14596 966 aa17.32■□□□□ 0.36
SCAF8-203ENST00000417268 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
SCAF8-203ENST00000417268 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
SCAF8-203ENST00000417268 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCAF8-203ENST00000417268 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
SCAF8-203ENST00000417268 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
SCAF8-203ENST00000417268 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
SCAF8-203ENST00000417268 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
SCAF8-203ENST00000417268 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
SCAF8-203ENST00000417268 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
SCAF8-203ENST00000417268 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
SCAF8-203ENST00000417268 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
SCAF8-203ENST00000417268 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
SCAF8-203ENST00000417268 GGT6Q6P531 493 aa17.24■□□□□ 0.35
SCAF8-203ENST00000417268 MLECQ14165 292 aa17.24■□□□□ 0.35
SCAF8-203ENST00000417268 CUX1P39880 1505 aa17.23■□□□□ 0.35
SCAF8-203ENST00000417268 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
SCAF8-203ENST00000417268 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
SCAF8-203ENST00000417268 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
SCAF8-203ENST00000417268 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
SCAF8-203ENST00000417268 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
SCAF8-203ENST00000417268 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■□□ 15.4
SCAF8-203ENST00000417268 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
SCAF8-203ENST00000417268 CDCA8Q53HL2 280 aa17.2■□□□□ 0.34
SCAF8-203ENST00000417268 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
SCAF8-203ENST00000417268 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SCAF8-203ENST00000417268 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
SCAF8-203ENST00000417268 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
SCAF8-203ENST00000417268 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
SCAF8-203ENST00000417268 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
SCAF8-203ENST00000417268 PKD2Q13563 968 aa17.17■□□□□ 0.34
SCAF8-203ENST00000417268 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
SCAF8-203ENST00000417268 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
SCAF8-203ENST00000417268 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
SCAF8-203ENST00000417268 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
SCAF8-203ENST00000417268 NUP155O75694 1391 aa17.15■□□□□ 0.34
SCAF8-203ENST00000417268 KIF3BO15066 747 aa17.13■□□□□ 0.33
SCAF8-203ENST00000417268 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
SCAF8-203ENST00000417268 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
SCAF8-203ENST00000417268 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
SCAF8-203ENST00000417268 KIF21BO75037 1637 aa17.11■□□□□ 0.33
SCAF8-203ENST00000417268 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
SCAF8-203ENST00000417268 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
SCAF8-203ENST00000417268 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
SCAF8-203ENST00000417268 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
SCAF8-203ENST00000417268 POGKQ9P215 609 aa17.1■□□□□ 0.33
SCAF8-203ENST00000417268 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■■■■□ 20.8
SCAF8-203ENST00000417268 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms