RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CUL7Q14999 1698 aa26.46■■□□□ 1.83
UBXN4-203ENST00000416538 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
UBXN4-203ENST00000416538 IGF1RP08069 1367 aa26.39■■□□□ 1.82
UBXN4-203ENST00000416538 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
UBXN4-203ENST00000416538 TRHP20396 242 aaPredicted RBP26.29■■□□□ 1.8
UBXN4-203ENST00000416538 KIAA0586Q9BVV6 1533 aa26.24■■□□□ 1.79
UBXN4-203ENST00000416538 JPH4Q96JJ6 628 aa26.24■■□□□ 1.79
UBXN4-203ENST00000416538 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.79
UBXN4-203ENST00000416538 ADCY10Q96PN6 1610 aa26.14■■□□□ 1.78
UBXN4-203ENST00000416538 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.78
UBXN4-203ENST00000416538 IQGAP2Q13576 1575 aa26.11■■□□□ 1.77
UBXN4-203ENST00000416538 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
UBXN4-203ENST00000416538 CTTNBP2Q8WZ74 1663 aa26■■□□□ 1.75
UBXN4-203ENST00000416538 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
UBXN4-203ENST00000416538 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
UBXN4-203ENST00000416538 UGGT2Q9NYU1 1516 aa25.94■■□□□ 1.74
UBXN4-203ENST00000416538 DIP2BQ9P265 1576 aa25.94■■□□□ 1.74
UBXN4-203ENST00000416538 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
UBXN4-203ENST00000416538 PTPRGP23470 1445 aa25.88■■□□□ 1.73
UBXN4-203ENST00000416538 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
UBXN4-203ENST00000416538 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
UBXN4-203ENST00000416538 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
UBXN4-203ENST00000416538 TNIKQ9UKE5 1360 aa25.88■■□□□ 1.73
UBXN4-203ENST00000416538 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
UBXN4-203ENST00000416538 TTBK1Q5TCY1 1321 aaPredicted RBP25.81■■□□□ 1.72
UBXN4-203ENST00000416538 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
UBXN4-203ENST00000416538 TSPOAP1O95153 1857 aa25.77■■□□□ 1.72
UBXN4-203ENST00000416538 UACAQ9BZF9 1416 aa25.74■■□□□ 1.71
UBXN4-203ENST00000416538 NPM1P06748 294 aaKnown RBP eCLIP25.74■■□□□ 1.71
UBXN4-203ENST00000416538 ZCCHC11Q5TAX3 1644 aaKnown RBP25.73■■□□□ 1.71
UBXN4-203ENST00000416538 FAM69CQ0P6D2 419 aa25.72■■□□□ 1.71
UBXN4-203ENST00000416538 KDM5BQ9UGL1 1544 aa25.69■■□□□ 1.7
UBXN4-203ENST00000416538 PPRC1Q5VV67 1664 aaKnown RBP25.69■■□□□ 1.7
UBXN4-203ENST00000416538 ASXL2Q76L83 1435 aa25.68■■□□□ 1.7
UBXN4-203ENST00000416538 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
UBXN4-203ENST00000416538 ABCA8O94911 1581 aa25.65■■□□□ 1.7
UBXN4-203ENST00000416538 GOLGA3Q08378 1498 aa25.64■■□□□ 1.69
UBXN4-203ENST00000416538 GLI2P10070 1586 aa25.63■■□□□ 1.69
UBXN4-203ENST00000416538 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
UBXN4-203ENST00000416538 KDM6BO15054 1643 aa25.59■■□□□ 1.69
UBXN4-203ENST00000416538 EEA1Q15075 1411 aa25.58■■□□□ 1.69
UBXN4-203ENST00000416538 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
UBXN4-203ENST00000416538 MAP3K4Q9Y6R4 1608 aa25.58■■□□□ 1.69
UBXN4-203ENST00000416538 EPRSP07814 1512 aaKnown RBP25.55■■□□□ 1.68
UBXN4-203ENST00000416538 KIF21BO75037 1637 aa25.52■■□□□ 1.68
UBXN4-203ENST00000416538 WDR7Q9Y4E6 1490 aa25.49■■□□□ 1.67
UBXN4-203ENST00000416538 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
UBXN4-203ENST00000416538 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
UBXN4-203ENST00000416538 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
UBXN4-203ENST00000416538 FOXD1Q16676 465 aa25.4■■□□□ 1.66
UBXN4-203ENST00000416538 CFAP43Q8NDM7 1665 aa25.39■■□□□ 1.66
UBXN4-203ENST00000416538 COL17A1Q9UMD9 1497 aaPredicted RBP25.37■■□□□ 1.65
UBXN4-203ENST00000416538 FHOD3Q2V2M9 1422 aa25.35■■□□□ 1.65
UBXN4-203ENST00000416538 ATP10BO94823 1461 aa25.34■■□□□ 1.65
UBXN4-203ENST00000416538 TEX14Q8IWB6 1497 aa25.31■■□□□ 1.64
UBXN4-203ENST00000416538 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
UBXN4-203ENST00000416538 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
UBXN4-203ENST00000416538 ARID3CA6NKF2 412 aa25.3■■□□□ 1.64
UBXN4-203ENST00000416538 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
UBXN4-203ENST00000416538 MAGI3Q5TCQ9 1506 aa25.27■■□□□ 1.64
UBXN4-203ENST00000416538 ABCA9Q8IUA7 1624 aa25.25■■□□□ 1.63
UBXN4-203ENST00000416538 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
UBXN4-203ENST00000416538 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
UBXN4-203ENST00000416538 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
UBXN4-203ENST00000416538 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
UBXN4-203ENST00000416538 KDM4FA0A1W2PPD8 638 aa25.13■■□□□ 1.61
UBXN4-203ENST00000416538 CDK13Q14004 1512 aaKnown RBP25.12■■□□□ 1.61
UBXN4-203ENST00000416538 LRRIQ1Q96JM4 1722 aa25.09■■□□□ 1.61
UBXN4-203ENST00000416538 ADGRL1O94910 1474 aa25.07■■□□□ 1.6
UBXN4-203ENST00000416538 TTC37Q6PGP7 1564 aa25.06■■□□□ 1.6
UBXN4-203ENST00000416538 UBTFP17480 764 aaKnown RBP25.06■■□□□ 1.6
UBXN4-203ENST00000416538 ARAP3Q8WWN8 1544 aa25.06■■□□□ 1.6
UBXN4-203ENST00000416538 FRMPD1Q5SYB0 1578 aa25.05■■□□□ 1.6
UBXN4-203ENST00000416538 HECW1Q76N89 1606 aa25.04■■□□□ 1.6
UBXN4-203ENST00000416538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.63e-6■■□□□ 13.1
UBXN4-203ENST00000416538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
UBXN4-203ENST00000416538 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
UBXN4-203ENST00000416538 NEO1Q92859 1461 aa24.98■■□□□ 1.59
UBXN4-203ENST00000416538 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
UBXN4-203ENST00000416538 RICTORQ6R327 1708 aa24.95■■□□□ 1.59
UBXN4-203ENST00000416538 PCF11O94913 1555 aaKnown RBP24.95■■□□□ 1.58
UBXN4-203ENST00000416538 KIF14Q15058 1648 aa24.94■■□□□ 1.58
UBXN4-203ENST00000416538 CFAP74Q9C0B2 1584 aa24.92■■□□□ 1.58
UBXN4-203ENST00000416538 PLEKHD1A6NEE1 506 aa24.9■■□□□ 1.58
UBXN4-203ENST00000416538 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.57
UBXN4-203ENST00000416538 MYO5CQ9NQX4 1742 aa24.88■■□□□ 1.57
UBXN4-203ENST00000416538 FANCAO15360 1455 aa24.87■■□□□ 1.57
UBXN4-203ENST00000416538 RAPGEF3O95398 923 aa24.85■■□□□ 1.57
UBXN4-203ENST00000416538 ARHGEF40Q8TER5 1519 aa24.84■■□□□ 1.57
UBXN4-203ENST00000416538 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
UBXN4-203ENST00000416538 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
UBXN4-203ENST00000416538 ZMYM4Q5VZL5 1548 aa24.8■■□□□ 1.56
UBXN4-203ENST00000416538 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
UBXN4-203ENST00000416538 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
UBXN4-203ENST00000416538 TROQ12816 1431 aaPredicted RBP24.78■■□□□ 1.56
UBXN4-203ENST00000416538 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
UBXN4-203ENST00000416538 ATP1B4Q9UN42 357 aaPredicted RBP24.78■■□□□ 1.56
UBXN4-203ENST00000416538 PLCH2O75038 1416 aa24.77■■□□□ 1.56
UBXN4-203ENST00000416538 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
UBXN4-203ENST00000416538 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms