RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-209ENST00000415920 ADCY10Q96PN6 1610 aa23.12■■□□□ 1.29
CPNE1-209ENST00000415920 IGF1RP08069 1367 aa23.12■■□□□ 1.29
CPNE1-209ENST00000415920 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
CPNE1-209ENST00000415920 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
CPNE1-209ENST00000415920 CUL7Q14999 1698 aa23.06■■□□□ 1.28
CPNE1-209ENST00000415920 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
CPNE1-209ENST00000415920 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
CPNE1-209ENST00000415920 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
CPNE1-209ENST00000415920 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
CPNE1-209ENST00000415920 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CPNE1-209ENST00000415920 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
CPNE1-209ENST00000415920 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
CPNE1-209ENST00000415920 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
CPNE1-209ENST00000415920 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-209ENST00000415920 PTPRGP23470 1445 aa22.89■■□□□ 1.25
CPNE1-209ENST00000415920 KDM6BO15054 1643 aa22.86■■□□□ 1.25
CPNE1-209ENST00000415920 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
CPNE1-209ENST00000415920 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
CPNE1-209ENST00000415920 ABCC2Q92887 1545 aa22.81■■□□□ 1.24
CPNE1-209ENST00000415920 DISP1Q96F81 1524 aa22.8■■□□□ 1.24
CPNE1-209ENST00000415920 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
CPNE1-209ENST00000415920 PPRC1Q5VV67 1664 aaKnown RBP22.77■■□□□ 1.24
CPNE1-209ENST00000415920 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
CPNE1-209ENST00000415920 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
CPNE1-209ENST00000415920 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
CPNE1-209ENST00000415920 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
CPNE1-209ENST00000415920 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
CPNE1-209ENST00000415920 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
CPNE1-209ENST00000415920 GLI2P10070 1586 aa22.7■■□□□ 1.22
CPNE1-209ENST00000415920 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
CPNE1-209ENST00000415920 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
CPNE1-209ENST00000415920 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
CPNE1-209ENST00000415920 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
CPNE1-209ENST00000415920 EEA1Q15075 1411 aa22.64■■□□□ 1.21
CPNE1-209ENST00000415920 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
CPNE1-209ENST00000415920 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-209ENST00000415920 MAP3K4Q9Y6R4 1608 aa22.62■■□□□ 1.21
CPNE1-209ENST00000415920 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.21
CPNE1-209ENST00000415920 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-209ENST00000415920 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
CPNE1-209ENST00000415920 KIF21BO75037 1637 aa22.5■■□□□ 1.19
CPNE1-209ENST00000415920 WDR7Q9Y4E6 1490 aa22.5■■□□□ 1.19
CPNE1-209ENST00000415920 ABCA8O94911 1581 aa22.48■■□□□ 1.19
CPNE1-209ENST00000415920 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
CPNE1-209ENST00000415920 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
CPNE1-209ENST00000415920 GOLGA3Q08378 1498 aa22.42■■□□□ 1.18
CPNE1-209ENST00000415920 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
CPNE1-209ENST00000415920 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
CPNE1-209ENST00000415920 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
CPNE1-209ENST00000415920 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CPNE1-209ENST00000415920 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
CPNE1-209ENST00000415920 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
CPNE1-209ENST00000415920 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
CPNE1-209ENST00000415920 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
CPNE1-209ENST00000415920 ATP10BO94823 1461 aa22.28■■□□□ 1.16
CPNE1-209ENST00000415920 HECW2Q9P2P5 1572 aa22.28■■□□□ 1.16
CPNE1-209ENST00000415920 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
CPNE1-209ENST00000415920 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-209ENST00000415920 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.14
CPNE1-209ENST00000415920 ARAP3Q8WWN8 1544 aa22.19■■□□□ 1.14
CPNE1-209ENST00000415920 RAPGEF6Q8TEU7 1601 aa22.19■■□□□ 1.14
CPNE1-209ENST00000415920 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-209ENST00000415920 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
CPNE1-209ENST00000415920 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
CPNE1-209ENST00000415920 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
CPNE1-209ENST00000415920 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
CPNE1-209ENST00000415920 FRMPD1Q5SYB0 1578 aa22.1■■□□□ 1.13
CPNE1-209ENST00000415920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-209ENST00000415920 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
CPNE1-209ENST00000415920 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
CPNE1-209ENST00000415920 NEO1Q92859 1461 aa22.05■■□□□ 1.12
CPNE1-209ENST00000415920 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
CPNE1-209ENST00000415920 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
CPNE1-209ENST00000415920 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
CPNE1-209ENST00000415920 PTPRMP28827 1452 aa22■■□□□ 1.11
CPNE1-209ENST00000415920 BCORL1Q5H9F3 1711 aa21.98■■□□□ 1.11
CPNE1-209ENST00000415920 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
CPNE1-209ENST00000415920 TTC37Q6PGP7 1564 aa21.96■■□□□ 1.11
CPNE1-209ENST00000415920 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
CPNE1-209ENST00000415920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
CPNE1-209ENST00000415920 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
CPNE1-209ENST00000415920 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
CPNE1-209ENST00000415920 CDK13Q14004 1512 aaKnown RBP21.93■■□□□ 1.1
CPNE1-209ENST00000415920 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
CPNE1-209ENST00000415920 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
CPNE1-209ENST00000415920 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
CPNE1-209ENST00000415920 FANCAO15360 1455 aa21.9■■□□□ 1.1
CPNE1-209ENST00000415920 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-209ENST00000415920 CLIP1P30622 1438 aa21.9■■□□□ 1.1
CPNE1-209ENST00000415920 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
CPNE1-209ENST00000415920 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
CPNE1-209ENST00000415920 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
CPNE1-209ENST00000415920 CFAP74Q9C0B2 1584 aa21.86■■□□□ 1.09
CPNE1-209ENST00000415920 YEATS2Q9ULM3 1422 aa21.85■■□□□ 1.09
CPNE1-209ENST00000415920 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
CPNE1-209ENST00000415920 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.09
CPNE1-209ENST00000415920 PCF11O94913 1555 aaKnown RBP21.82■■□□□ 1.08
CPNE1-209ENST00000415920 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
CPNE1-209ENST00000415920 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms