RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
FNDC3B-202ENST00000415807 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
FNDC3B-202ENST00000415807 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
FNDC3B-202ENST00000415807 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
FNDC3B-202ENST00000415807 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
FNDC3B-202ENST00000415807 KIF21BO75037 1637 aa16.69■□□□□ 0.26
FNDC3B-202ENST00000415807 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
FNDC3B-202ENST00000415807 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
FNDC3B-202ENST00000415807 MIER1Q8N108 512 aa16.66■□□□□ 0.26
FNDC3B-202ENST00000415807 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
FNDC3B-202ENST00000415807 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■□ 22.4
FNDC3B-202ENST00000415807 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
FNDC3B-202ENST00000415807 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
FNDC3B-202ENST00000415807 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
FNDC3B-202ENST00000415807 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
FNDC3B-202ENST00000415807 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
FNDC3B-202ENST00000415807 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
FNDC3B-202ENST00000415807 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
FNDC3B-202ENST00000415807 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
FNDC3B-202ENST00000415807 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
FNDC3B-202ENST00000415807 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
FNDC3B-202ENST00000415807 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
FNDC3B-202ENST00000415807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.246e-9■□□□□ 9.6
FNDC3B-202ENST00000415807 ACIN1Q9UKV3 1341 aaKnown RBP16.52■□□□□ 0.24
FNDC3B-202ENST00000415807 FOXD1Q16676 465 aa16.51■□□□□ 0.23
FNDC3B-202ENST00000415807 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
FNDC3B-202ENST00000415807 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
FNDC3B-202ENST00000415807 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
FNDC3B-202ENST00000415807 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
FNDC3B-202ENST00000415807 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
FNDC3B-202ENST00000415807 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
FNDC3B-202ENST00000415807 JPH4Q96JJ6 628 aa16.47■□□□□ 0.23
FNDC3B-202ENST00000415807 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
FNDC3B-202ENST00000415807 ANP32CO43423 234 aa16.45■□□□□ 0.22
FNDC3B-202ENST00000415807 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
FNDC3B-202ENST00000415807 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
FNDC3B-202ENST00000415807 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
FNDC3B-202ENST00000415807 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
FNDC3B-202ENST00000415807 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
FNDC3B-202ENST00000415807 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
FNDC3B-202ENST00000415807 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
FNDC3B-202ENST00000415807 NEFLP07196 543 aa16.4■□□□□ 0.22
FNDC3B-202ENST00000415807 BCANQ96GW7 911 aa16.39■□□□□ 0.21
FNDC3B-202ENST00000415807 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
FNDC3B-202ENST00000415807 LRRC9Q6ZRR7 1453 aa16.36■□□□□ 0.21
FNDC3B-202ENST00000415807 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
FNDC3B-202ENST00000415807 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
FNDC3B-202ENST00000415807 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
FNDC3B-202ENST00000415807 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
FNDC3B-202ENST00000415807 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.21
FNDC3B-202ENST00000415807 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
FNDC3B-202ENST00000415807 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
FNDC3B-202ENST00000415807 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
FNDC3B-202ENST00000415807 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
FNDC3B-202ENST00000415807 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
FNDC3B-202ENST00000415807 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
FNDC3B-202ENST00000415807 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■■■□□ 18.4
FNDC3B-202ENST00000415807 CASKIN1Q8WXD9 1431 aa16.27■□□□□ 0.2
FNDC3B-202ENST00000415807 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
FNDC3B-202ENST00000415807 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
FNDC3B-202ENST00000415807 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.195e-11■■■■■ 32.1
FNDC3B-202ENST00000415807 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
FNDC3B-202ENST00000415807 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
FNDC3B-202ENST00000415807 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
FNDC3B-202ENST00000415807 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
FNDC3B-202ENST00000415807 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
FNDC3B-202ENST00000415807 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
FNDC3B-202ENST00000415807 PKD2Q13563 968 aa16.21■□□□□ 0.19
FNDC3B-202ENST00000415807 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
FNDC3B-202ENST00000415807 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
FNDC3B-202ENST00000415807 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
FNDC3B-202ENST00000415807 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
FNDC3B-202ENST00000415807 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■□□□□ 9.9
FNDC3B-202ENST00000415807 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
FNDC3B-202ENST00000415807 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
FNDC3B-202ENST00000415807 PTPRGP23470 1445 aa16.17■□□□□ 0.18
FNDC3B-202ENST00000415807 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
FNDC3B-202ENST00000415807 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
FNDC3B-202ENST00000415807 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
FNDC3B-202ENST00000415807 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
FNDC3B-202ENST00000415807 KIF21AQ7Z4S6 1674 aa16.13■□□□□ 0.17
FNDC3B-202ENST00000415807 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
FNDC3B-202ENST00000415807 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
FNDC3B-202ENST00000415807 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
FNDC3B-202ENST00000415807 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
FNDC3B-202ENST00000415807 NUP155O75694 1391 aa16.12■□□□□ 0.17
FNDC3B-202ENST00000415807 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
FNDC3B-202ENST00000415807 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
FNDC3B-202ENST00000415807 CUL7Q14999 1698 aa16.09■□□□□ 0.17
FNDC3B-202ENST00000415807 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
FNDC3B-202ENST00000415807 FKBP8Q14318 412 aa16.09■□□□□ 0.17
FNDC3B-202ENST00000415807 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
FNDC3B-202ENST00000415807 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
FNDC3B-202ENST00000415807 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
FNDC3B-202ENST00000415807 PLB1Q6P1J6 1458 aa16.06■□□□□ 0.16
FNDC3B-202ENST00000415807 ANKRD30AQ9BXX3 1397 aa16.05■□□□□ 0.16
FNDC3B-202ENST00000415807 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
FNDC3B-202ENST00000415807 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
FNDC3B-202ENST00000415807 GRIN2AQ12879 1464 aa16.02■□□□□ 0.16
FNDC3B-202ENST00000415807 EFCAB2Q5VUJ9 269 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms