RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 KIF21BO75037 1637 aa20.64■□□□□ 0.9
HNF4A-204ENST00000415691 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
HNF4A-204ENST00000415691 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
HNF4A-204ENST00000415691 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
HNF4A-204ENST00000415691 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
HNF4A-204ENST00000415691 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
HNF4A-204ENST00000415691 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
HNF4A-204ENST00000415691 CHD1O14646 1710 aa20.48■□□□□ 0.87
HNF4A-204ENST00000415691 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
HNF4A-204ENST00000415691 NUP160Q12769 1436 aa20.42■□□□□ 0.86
HNF4A-204ENST00000415691 KIAA0586Q9BVV6 1533 aa20.38■□□□□ 0.85
HNF4A-204ENST00000415691 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
HNF4A-204ENST00000415691 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
HNF4A-204ENST00000415691 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
HNF4A-204ENST00000415691 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
HNF4A-204ENST00000415691 P3H3Q8IVL6 736 aa20.33■□□□□ 0.84
HNF4A-204ENST00000415691 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
HNF4A-204ENST00000415691 CLIP1P30622 1438 aa20.31■□□□□ 0.84
HNF4A-204ENST00000415691 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
HNF4A-204ENST00000415691 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
HNF4A-204ENST00000415691 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
HNF4A-204ENST00000415691 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
HNF4A-204ENST00000415691 PRG4Q92954 1404 aaPredicted RBP20.21■□□□□ 0.83
HNF4A-204ENST00000415691 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
HNF4A-204ENST00000415691 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
HNF4A-204ENST00000415691 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
HNF4A-204ENST00000415691 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
HNF4A-204ENST00000415691 SAMD9Q5K651 1589 aa20.16■□□□□ 0.82
HNF4A-204ENST00000415691 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
HNF4A-204ENST00000415691 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
HNF4A-204ENST00000415691 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.81
HNF4A-204ENST00000415691 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
HNF4A-204ENST00000415691 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
HNF4A-204ENST00000415691 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
HNF4A-204ENST00000415691 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
HNF4A-204ENST00000415691 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
HNF4A-204ENST00000415691 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
HNF4A-204ENST00000415691 PTPRGP23470 1445 aa20.03■□□□□ 0.8
HNF4A-204ENST00000415691 FMN1Q68DA7 1419 aa20■□□□□ 0.79
HNF4A-204ENST00000415691 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
HNF4A-204ENST00000415691 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
HNF4A-204ENST00000415691 PLB1Q6P1J6 1458 aa19.97■□□□□ 0.79
HNF4A-204ENST00000415691 ARID3CA6NKF2 412 aa19.97■□□□□ 0.79
HNF4A-204ENST00000415691 CASKIN1Q8WXD9 1431 aa19.94■□□□□ 0.78
HNF4A-204ENST00000415691 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
HNF4A-204ENST00000415691 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
HNF4A-204ENST00000415691 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
HNF4A-204ENST00000415691 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
HNF4A-204ENST00000415691 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
HNF4A-204ENST00000415691 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
HNF4A-204ENST00000415691 ABCA8O94911 1581 aa19.88■□□□□ 0.77
HNF4A-204ENST00000415691 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
HNF4A-204ENST00000415691 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
HNF4A-204ENST00000415691 APLP2Q06481 763 aa19.87■□□□□ 0.77
HNF4A-204ENST00000415691 NUP153P49790 1475 aaKnown RBP19.86■□□□□ 0.77
HNF4A-204ENST00000415691 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
HNF4A-204ENST00000415691 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
HNF4A-204ENST00000415691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
HNF4A-204ENST00000415691 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
HNF4A-204ENST00000415691 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
HNF4A-204ENST00000415691 LRRIQ1Q96JM4 1722 aa19.81■□□□□ 0.76
HNF4A-204ENST00000415691 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
HNF4A-204ENST00000415691 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
HNF4A-204ENST00000415691 HECW1Q76N89 1606 aa19.81■□□□□ 0.76
HNF4A-204ENST00000415691 ATP10BO94823 1461 aa19.8■□□□□ 0.76
HNF4A-204ENST00000415691 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
HNF4A-204ENST00000415691 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
HNF4A-204ENST00000415691 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
HNF4A-204ENST00000415691 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
HNF4A-204ENST00000415691 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
HNF4A-204ENST00000415691 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
HNF4A-204ENST00000415691 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
HNF4A-204ENST00000415691 KDM5BQ9UGL1 1544 aa19.71■□□□□ 0.75
HNF4A-204ENST00000415691 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
HNF4A-204ENST00000415691 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
HNF4A-204ENST00000415691 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
HNF4A-204ENST00000415691 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
HNF4A-204ENST00000415691 MTUS2Q5JR59 1369 aa19.68■□□□□ 0.74
HNF4A-204ENST00000415691 CDK11AQ9UQ88 783 aaPredicted RBP19.68■□□□□ 0.74
HNF4A-204ENST00000415691 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
HNF4A-204ENST00000415691 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
HNF4A-204ENST00000415691 KCNH8Q96L42 1107 aa19.64■□□□□ 0.73
HNF4A-204ENST00000415691 TROQ12816 1431 aaPredicted RBP19.61■□□□□ 0.73
HNF4A-204ENST00000415691 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
HNF4A-204ENST00000415691 EHBP1L1Q8N3D4 1523 aa19.58■□□□□ 0.72
HNF4A-204ENST00000415691 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
HNF4A-204ENST00000415691 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
HNF4A-204ENST00000415691 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
HNF4A-204ENST00000415691 KIF14Q15058 1648 aa19.53■□□□□ 0.72
HNF4A-204ENST00000415691 SUPT6HQ7KZ85 1726 aaKnown RBP19.5■□□□□ 0.71
HNF4A-204ENST00000415691 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
HNF4A-204ENST00000415691 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
HNF4A-204ENST00000415691 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
HNF4A-204ENST00000415691 CCNB3Q8WWL7 1395 aa19.47■□□□□ 0.71
HNF4A-204ENST00000415691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.46■□□□□ 0.71
HNF4A-204ENST00000415691 GPATCH8Q9UKJ3 1502 aaKnown RBP19.44■□□□□ 0.7
HNF4A-204ENST00000415691 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
HNF4A-204ENST00000415691 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
HNF4A-204ENST00000415691 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
HNF4A-204ENST00000415691 FAM69CQ0P6D2 419 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms