RNA–Protein interactions for RNA: ENST00000415680.6

TRIM24-202, Transcript of tripartite motif containing 24, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM24, Length 3,799 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24-202ENST00000415680 FOXD1Q16676 465 aa22.99■■□□□ 1.27
TRIM24-202ENST00000415680 NEFLP07196 543 aa22.99■■□□□ 1.27
TRIM24-202ENST00000415680 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
TRIM24-202ENST00000415680 IGF1RP08069 1367 aa22.97■■□□□ 1.27
TRIM24-202ENST00000415680 RAD54L2Q9Y4B4 1467 aa22.95■■□□□ 1.26
TRIM24-202ENST00000415680 FKBP8Q14318 412 aa22.95■■□□□ 1.26
TRIM24-202ENST00000415680 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
TRIM24-202ENST00000415680 ANP32CO43423 234 aa22.93■■□□□ 1.26
TRIM24-202ENST00000415680 CUX1P39880 1505 aa22.91■■□□□ 1.26
TRIM24-202ENST00000415680 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
TRIM24-202ENST00000415680 NESP48681 1621 aa22.88■■□□□ 1.25
TRIM24-202ENST00000415680 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
TRIM24-202ENST00000415680 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
TRIM24-202ENST00000415680 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
TRIM24-202ENST00000415680 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
TRIM24-202ENST00000415680 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
TRIM24-202ENST00000415680 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
TRIM24-202ENST00000415680 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
TRIM24-202ENST00000415680 SUPT16HQ9Y5B9 1047 aaKnown RBP22.75■■□□□ 1.23
TRIM24-202ENST00000415680 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
TRIM24-202ENST00000415680 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
TRIM24-202ENST00000415680 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
TRIM24-202ENST00000415680 CFTRP13569 1480 aa22.71■■□□□ 1.23
TRIM24-202ENST00000415680 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
TRIM24-202ENST00000415680 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
TRIM24-202ENST00000415680 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
TRIM24-202ENST00000415680 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
TRIM24-202ENST00000415680 SLC4A1APQ9BWU0 796 aaKnown RBP22.61■■□□□ 1.21
TRIM24-202ENST00000415680 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
TRIM24-202ENST00000415680 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
TRIM24-202ENST00000415680 FHAD1B1AJZ9 1412 aa22.6■■□□□ 1.21
TRIM24-202ENST00000415680 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
TRIM24-202ENST00000415680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.28e-8■■□□□ 12.1
TRIM24-202ENST00000415680 ZNF644Q9H582 1327 aaPredicted RBP22.56■■□□□ 1.2
TRIM24-202ENST00000415680 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
TRIM24-202ENST00000415680 LRRC9Q6ZRR7 1453 aa22.49■■□□□ 1.19
TRIM24-202ENST00000415680 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
TRIM24-202ENST00000415680 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
TRIM24-202ENST00000415680 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
TRIM24-202ENST00000415680 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
TRIM24-202ENST00000415680 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
TRIM24-202ENST00000415680 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.199e-7■■■■□ 26.2
TRIM24-202ENST00000415680 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
TRIM24-202ENST00000415680 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.181e-6■■■■■ 31.6
TRIM24-202ENST00000415680 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
TRIM24-202ENST00000415680 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
TRIM24-202ENST00000415680 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
TRIM24-202ENST00000415680 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
TRIM24-202ENST00000415680 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
TRIM24-202ENST00000415680 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
TRIM24-202ENST00000415680 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
TRIM24-202ENST00000415680 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
TRIM24-202ENST00000415680 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
TRIM24-202ENST00000415680 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
TRIM24-202ENST00000415680 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
TRIM24-202ENST00000415680 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.16
TRIM24-202ENST00000415680 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
TRIM24-202ENST00000415680 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
TRIM24-202ENST00000415680 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
TRIM24-202ENST00000415680 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
TRIM24-202ENST00000415680 TIAM1Q13009 1591 aa22.29■■□□□ 1.16
TRIM24-202ENST00000415680 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
TRIM24-202ENST00000415680 PKD2Q13563 968 aa22.26■■□□□ 1.15
TRIM24-202ENST00000415680 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
TRIM24-202ENST00000415680 TSPY4P0CV99 314 aa22.25■■□□□ 1.15
TRIM24-202ENST00000415680 TSPY10P0CW01 314 aa22.25■■□□□ 1.15
TRIM24-202ENST00000415680 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
TRIM24-202ENST00000415680 B4GALNT3Q6L9W6 998 aa22.24■■□□□ 1.15
TRIM24-202ENST00000415680 MYT1Q01538 1121 aa22.23■■□□□ 1.15
TRIM24-202ENST00000415680 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
TRIM24-202ENST00000415680 HNRNPMP52272 730 aaKnown RBP eCLIP22.22■■□□□ 1.156e-7■■■■■ 33.8
TRIM24-202ENST00000415680 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
TRIM24-202ENST00000415680 NCOA2Q15596 1464 aa22.2■■□□□ 1.14
TRIM24-202ENST00000415680 DCAF11Q8TEB1 546 aa22.18■■□□□ 1.14
TRIM24-202ENST00000415680 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
TRIM24-202ENST00000415680 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
TRIM24-202ENST00000415680 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
TRIM24-202ENST00000415680 WASHC2AQ641Q2 1341 aa22.17■■□□□ 1.14
TRIM24-202ENST00000415680 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
TRIM24-202ENST00000415680 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
TRIM24-202ENST00000415680 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
TRIM24-202ENST00000415680 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.14
TRIM24-202ENST00000415680 JPH4Q96JJ6 628 aa22.13■■□□□ 1.13
TRIM24-202ENST00000415680 MYOM3Q5VTT5 1437 aa22.12■■□□□ 1.13
TRIM24-202ENST00000415680 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
TRIM24-202ENST00000415680 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
TRIM24-202ENST00000415680 TIMELESSQ9UNS1 1208 aa22.09■■□□□ 1.13
TRIM24-202ENST00000415680 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
TRIM24-202ENST00000415680 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
TRIM24-202ENST00000415680 RBM19Q9Y4C8 960 aaKnown RBP22.07■■□□□ 1.12
TRIM24-202ENST00000415680 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
TRIM24-202ENST00000415680 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
TRIM24-202ENST00000415680 NAIPQ13075 1403 aa22.04■■□□□ 1.12
TRIM24-202ENST00000415680 FYCO1Q9BQS8 1478 aa22.04■■□□□ 1.12
TRIM24-202ENST00000415680 NUP155O75694 1391 aa22.04■■□□□ 1.12
TRIM24-202ENST00000415680 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
TRIM24-202ENST00000415680 UACAQ9BZF9 1416 aa22.02■■□□□ 1.12
TRIM24-202ENST00000415680 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
TRIM24-202ENST00000415680 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
TRIM24-202ENST00000415680 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms