RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 IGF1RP08069 1367 aa27.01■■□□□ 1.91
ACTB-202ENST00000414620 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
ACTB-202ENST00000414620 KIAA0586Q9BVV6 1533 aa26.89■■□□□ 1.89
ACTB-202ENST00000414620 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
ACTB-202ENST00000414620 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
ACTB-202ENST00000414620 ADCY10Q96PN6 1610 aa26.79■■□□□ 1.88
ACTB-202ENST00000414620 IQGAP2Q13576 1575 aa26.75■■□□□ 1.87
ACTB-202ENST00000414620 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
ACTB-202ENST00000414620 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
ACTB-202ENST00000414620 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
ACTB-202ENST00000414620 NPM1P06748 294 aaKnown RBP eCLIP26.64■■□□□ 1.86
ACTB-202ENST00000414620 CARMIL2Q6F5E8 1435 aa26.62■■□□□ 1.85
ACTB-202ENST00000414620 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
ACTB-202ENST00000414620 PTPRGP23470 1445 aa26.61■■□□□ 1.85
ACTB-202ENST00000414620 DIP2BQ9P265 1576 aa26.61■■□□□ 1.85
ACTB-202ENST00000414620 ABCC10Q5T3U5 1492 aa26.58■■□□□ 1.85
ACTB-202ENST00000414620 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.84
ACTB-202ENST00000414620 DISP1Q96F81 1524 aa26.56■■□□□ 1.84
ACTB-202ENST00000414620 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
ACTB-202ENST00000414620 FAM69CQ0P6D2 419 aa26.54■■□□□ 1.84
ACTB-202ENST00000414620 UGGT2Q9NYU1 1516 aa26.54■■□□□ 1.84
ACTB-202ENST00000414620 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
ACTB-202ENST00000414620 ABCC2Q92887 1545 aa26.47■■□□□ 1.83
ACTB-202ENST00000414620 UACAQ9BZF9 1416 aa26.43■■□□□ 1.82
ACTB-202ENST00000414620 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
ACTB-202ENST00000414620 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
ACTB-202ENST00000414620 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.81
ACTB-202ENST00000414620 ASXL2Q76L83 1435 aa26.37■■□□□ 1.81
ACTB-202ENST00000414620 KDM6BO15054 1643 aa26.35■■□□□ 1.81
ACTB-202ENST00000414620 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
ACTB-202ENST00000414620 GOLGA3Q08378 1498 aa26.31■■□□□ 1.8
ACTB-202ENST00000414620 KDM5BQ9UGL1 1544 aa26.31■■□□□ 1.8
ACTB-202ENST00000414620 PPRC1Q5VV67 1664 aaKnown RBP26.31■■□□□ 1.8
ACTB-202ENST00000414620 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
ACTB-202ENST00000414620 GLI2P10070 1586 aa26.29■■□□□ 1.8
ACTB-202ENST00000414620 ABCA8O94911 1581 aa26.24■■□□□ 1.79
ACTB-202ENST00000414620 CSRNP3Q8WYN3 585 aa26.22■■□□□ 1.79
ACTB-202ENST00000414620 EPRSP07814 1512 aaKnown RBP26.22■■□□□ 1.79
ACTB-202ENST00000414620 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
ACTB-202ENST00000414620 EEA1Q15075 1411 aa26.15■■□□□ 1.78
ACTB-202ENST00000414620 P3H3Q8IVL6 736 aa26.15■■□□□ 1.78
ACTB-202ENST00000414620 WDR7Q9Y4E6 1490 aa26.15■■□□□ 1.78
ACTB-202ENST00000414620 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
ACTB-202ENST00000414620 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
ACTB-202ENST00000414620 ARID3CA6NKF2 412 aa26.06■■□□□ 1.76
ACTB-202ENST00000414620 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
ACTB-202ENST00000414620 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
ACTB-202ENST00000414620 KIF21BO75037 1637 aa26.05■■□□□ 1.76
ACTB-202ENST00000414620 TEX14Q8IWB6 1497 aa26.04■■□□□ 1.76
ACTB-202ENST00000414620 RAPGEF6Q8TEU7 1601 aa26.03■■□□□ 1.76
ACTB-202ENST00000414620 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
ACTB-202ENST00000414620 COL17A1Q9UMD9 1497 aaPredicted RBP26■■□□□ 1.75
ACTB-202ENST00000414620 ATP10BO94823 1461 aa25.97■■□□□ 1.75
ACTB-202ENST00000414620 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
ACTB-202ENST00000414620 CD109Q6YHK3 1445 aa25.95■■□□□ 1.74
ACTB-202ENST00000414620 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
ACTB-202ENST00000414620 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
ACTB-202ENST00000414620 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
ACTB-202ENST00000414620 KDM4FA0A1W2PPD8 638 aa25.89■■□□□ 1.74
ACTB-202ENST00000414620 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
ACTB-202ENST00000414620 NUP153P49790 1475 aaKnown RBP25.87■■□□□ 1.73
ACTB-202ENST00000414620 ABCA9Q8IUA7 1624 aa25.86■■□□□ 1.73
ACTB-202ENST00000414620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.85■■□□□ 1.73
ACTB-202ENST00000414620 HNRNPUL2Q1KMD3 747 aaKnown RBP25.85■■□□□ 1.73
ACTB-202ENST00000414620 ADGRL1O94910 1474 aa25.81■■□□□ 1.72
ACTB-202ENST00000414620 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
ACTB-202ENST00000414620 CDK13Q14004 1512 aaKnown RBP25.7■■□□□ 1.7
ACTB-202ENST00000414620 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.7
ACTB-202ENST00000414620 ARHGAP35Q9NRY4 1499 aa25.68■■□□□ 1.7
ACTB-202ENST00000414620 HECW1Q76N89 1606 aa25.65■■□□□ 1.7
ACTB-202ENST00000414620 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
ACTB-202ENST00000414620 PLEKHD1A6NEE1 506 aa25.64■■□□□ 1.7
ACTB-202ENST00000414620 NEO1Q92859 1461 aa25.64■■□□□ 1.69
ACTB-202ENST00000414620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.63■■□□□ 1.692e-34■■■■□ 20.9
ACTB-202ENST00000414620 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
ACTB-202ENST00000414620 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
ACTB-202ENST00000414620 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
ACTB-202ENST00000414620 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
ACTB-202ENST00000414620 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
ACTB-202ENST00000414620 CFAP74Q9C0B2 1584 aa25.58■■□□□ 1.69
ACTB-202ENST00000414620 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
ACTB-202ENST00000414620 RICTORQ6R327 1708 aa25.55■■□□□ 1.68
ACTB-202ENST00000414620 FANCAO15360 1455 aa25.53■■□□□ 1.68
ACTB-202ENST00000414620 MYO5CQ9NQX4 1742 aa25.51■■□□□ 1.67
ACTB-202ENST00000414620 KIF14Q15058 1648 aa25.5■■□□□ 1.67
ACTB-202ENST00000414620 AKNAQ7Z591 1439 aa25.5■■□□□ 1.67
ACTB-202ENST00000414620 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
ACTB-202ENST00000414620 DENND4BO75064 1496 aaPredicted RBP25.47■■□□□ 1.67
ACTB-202ENST00000414620 ARHGEF40Q8TER5 1519 aa25.46■■□□□ 1.67
ACTB-202ENST00000414620 ADAMTSL3P82987 1691 aa25.43■■□□□ 1.66
ACTB-202ENST00000414620 HECW2Q9P2P5 1572 aa25.43■■□□□ 1.66
ACTB-202ENST00000414620 BCORL1Q5H9F3 1711 aa25.43■■□□□ 1.66
ACTB-202ENST00000414620 PLCH2O75038 1416 aa25.39■■□□□ 1.66
ACTB-202ENST00000414620 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
ACTB-202ENST00000414620 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
ACTB-202ENST00000414620 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
ACTB-202ENST00000414620 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
ACTB-202ENST00000414620 SIGLEC1Q9BZZ2 1709 aa25.36■■□□□ 1.65
ACTB-202ENST00000414620 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
ACTB-202ENST00000414620 ARID4BQ4LE39 1312 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms