RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
SNRPE-202ENST00000414487 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
SNRPE-202ENST00000414487 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
SNRPE-202ENST00000414487 CUX1P39880 1505 aa14.12□□□□□ -0.15
SNRPE-202ENST00000414487 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
SNRPE-202ENST00000414487 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
SNRPE-202ENST00000414487 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.17
SNRPE-202ENST00000414487 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SNRPE-202ENST00000414487 POLA2Q14181 598 aa14.01□□□□□ -0.17
SNRPE-202ENST00000414487 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
SNRPE-202ENST00000414487 ARAP1Q96P48 1450 aa14□□□□□ -0.17
SNRPE-202ENST00000414487 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
SNRPE-202ENST00000414487 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.19
SNRPE-202ENST00000414487 CUX2O14529 1486 aa13.89□□□□□ -0.19
SNRPE-202ENST00000414487 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
SNRPE-202ENST00000414487 IGF1RP08069 1367 aa13.87□□□□□ -0.19
SNRPE-202ENST00000414487 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
SNRPE-202ENST00000414487 POTEHQ6S545 545 aa13.85□□□□□ -0.19
SNRPE-202ENST00000414487 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
SNRPE-202ENST00000414487 MAP3K1Q13233 1512 aa13.84□□□□□ -0.19
SNRPE-202ENST00000414487 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.2
SNRPE-202ENST00000414487 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
SNRPE-202ENST00000414487 CLSPNQ9HAW4 1339 aa13.83□□□□□ -0.2
SNRPE-202ENST00000414487 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
SNRPE-202ENST00000414487 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
SNRPE-202ENST00000414487 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
SNRPE-202ENST00000414487 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
SNRPE-202ENST00000414487 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
SNRPE-202ENST00000414487 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
SNRPE-202ENST00000414487 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
SNRPE-202ENST00000414487 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
SNRPE-202ENST00000414487 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
SNRPE-202ENST00000414487 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
SNRPE-202ENST00000414487 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
SNRPE-202ENST00000414487 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
SNRPE-202ENST00000414487 CUL7Q14999 1698 aa13.72□□□□□ -0.21
SNRPE-202ENST00000414487 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
SNRPE-202ENST00000414487 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
SNRPE-202ENST00000414487 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
SNRPE-202ENST00000414487 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
SNRPE-202ENST00000414487 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
SNRPE-202ENST00000414487 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
SNRPE-202ENST00000414487 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
SNRPE-202ENST00000414487 CENPBP07199 599 aaPredicted RBP13.69□□□□□ -0.22
SNRPE-202ENST00000414487 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.221e-7■■■■■ 28.5
SNRPE-202ENST00000414487 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
SNRPE-202ENST00000414487 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
SNRPE-202ENST00000414487 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
SNRPE-202ENST00000414487 FYCO1Q9BQS8 1478 aa13.65□□□□□ -0.22
SNRPE-202ENST00000414487 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
SNRPE-202ENST00000414487 NESP48681 1621 aa13.64□□□□□ -0.23
SNRPE-202ENST00000414487 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
SNRPE-202ENST00000414487 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
SNRPE-202ENST00000414487 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
SNRPE-202ENST00000414487 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
SNRPE-202ENST00000414487 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
SNRPE-202ENST00000414487 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
SNRPE-202ENST00000414487 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
SNRPE-202ENST00000414487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.242e-12■□□□□ 8.8
SNRPE-202ENST00000414487 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
SNRPE-202ENST00000414487 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
SNRPE-202ENST00000414487 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
SNRPE-202ENST00000414487 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
SNRPE-202ENST00000414487 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
SNRPE-202ENST00000414487 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
SNRPE-202ENST00000414487 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
SNRPE-202ENST00000414487 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
SNRPE-202ENST00000414487 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
SNRPE-202ENST00000414487 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
SNRPE-202ENST00000414487 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
SNRPE-202ENST00000414487 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
SNRPE-202ENST00000414487 MIER1Q8N108 512 aa13.52□□□□□ -0.25
SNRPE-202ENST00000414487 MAPKBP1O60336 1514 aa13.52□□□□□ -0.25
SNRPE-202ENST00000414487 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
SNRPE-202ENST00000414487 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
SNRPE-202ENST00000414487 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
SNRPE-202ENST00000414487 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
SNRPE-202ENST00000414487 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
SNRPE-202ENST00000414487 ITGAEP38570 1179 aa13.46□□□□□ -0.25
SNRPE-202ENST00000414487 GTF3C3Q9Y5Q9 886 aa13.46□□□□□ -0.25
SNRPE-202ENST00000414487 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
SNRPE-202ENST00000414487 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
SNRPE-202ENST00000414487 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
SNRPE-202ENST00000414487 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
SNRPE-202ENST00000414487 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
SNRPE-202ENST00000414487 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
SNRPE-202ENST00000414487 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
SNRPE-202ENST00000414487 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
SNRPE-202ENST00000414487 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
SNRPE-202ENST00000414487 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
SNRPE-202ENST00000414487 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
SNRPE-202ENST00000414487 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
SNRPE-202ENST00000414487 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
SNRPE-202ENST00000414487 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
SNRPE-202ENST00000414487 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
SNRPE-202ENST00000414487 NCOA2Q15596 1464 aa13.38□□□□□ -0.27
SNRPE-202ENST00000414487 FBLN2P98095 1184 aa13.38□□□□□ -0.27
SNRPE-202ENST00000414487 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
SNRPE-202ENST00000414487 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
SNRPE-202ENST00000414487 HFM1A2PYH4 1435 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms