RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 WDR62O43379 1518 aa14.58□□□□□ -0.08
C2CD3-204ENST00000414160 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
C2CD3-204ENST00000414160 ITGAEP38570 1179 aa14.57□□□□□ -0.08
C2CD3-204ENST00000414160 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
C2CD3-204ENST00000414160 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
C2CD3-204ENST00000414160 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
C2CD3-204ENST00000414160 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
C2CD3-204ENST00000414160 TOPBP1Q92547 1522 aa14.55□□□□□ -0.08
C2CD3-204ENST00000414160 CUX1P39880 1505 aa14.55□□□□□ -0.08
C2CD3-204ENST00000414160 BCANQ96GW7 911 aa14.55□□□□□ -0.08
C2CD3-204ENST00000414160 FKBP8Q14318 412 aa14.52□□□□□ -0.09
C2CD3-204ENST00000414160 RAB3GAP2Q9H2M9 1393 aa14.51□□□□□ -0.09
C2CD3-204ENST00000414160 DDX10Q13206 875 aaKnown RBP14.5□□□□□ -0.09
C2CD3-204ENST00000414160 MAPKBP1O60336 1514 aa14.48□□□□□ -0.09
C2CD3-204ENST00000414160 ARHGAP35Q9NRY4 1499 aa14.46□□□□□ -0.09
C2CD3-204ENST00000414160 SIN3AQ96ST3 1273 aa14.45□□□□□ -0.1
C2CD3-204ENST00000414160 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
C2CD3-204ENST00000414160 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
C2CD3-204ENST00000414160 PPP1R15AO75807 674 aaPredicted RBP14.44□□□□□ -0.1
C2CD3-204ENST00000414160 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
C2CD3-204ENST00000414160 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
C2CD3-204ENST00000414160 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
C2CD3-204ENST00000414160 RBM19Q9Y4C8 960 aaKnown RBP14.41□□□□□ -0.1
C2CD3-204ENST00000414160 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
C2CD3-204ENST00000414160 BCL11AQ9H165 835 aa14.39□□□□□ -0.11
C2CD3-204ENST00000414160 HIRIP3Q9BW71 556 aaPredicted RBP14.39□□□□□ -0.11
C2CD3-204ENST00000414160 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
C2CD3-204ENST00000414160 PHF23Q9BUL5 403 aaPredicted RBP14.38□□□□□ -0.11
C2CD3-204ENST00000414160 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
C2CD3-204ENST00000414160 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
C2CD3-204ENST00000414160 NEFLP07196 543 aa14.37□□□□□ -0.11
C2CD3-204ENST00000414160 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
C2CD3-204ENST00000414160 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
C2CD3-204ENST00000414160 FAM50AQ14320 339 aaKnown RBP14.34□□□□□ -0.11
C2CD3-204ENST00000414160 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
C2CD3-204ENST00000414160 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
C2CD3-204ENST00000414160 ANP32CO43423 234 aa14.33□□□□□ -0.12
C2CD3-204ENST00000414160 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
C2CD3-204ENST00000414160 IGF1RP08069 1367 aa14.31□□□□□ -0.12
C2CD3-204ENST00000414160 MAP3K1Q13233 1512 aa14.31□□□□□ -0.12
C2CD3-204ENST00000414160 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
C2CD3-204ENST00000414160 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
C2CD3-204ENST00000414160 MSH5O43196 834 aa14.26□□□□□ -0.13
C2CD3-204ENST00000414160 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
C2CD3-204ENST00000414160 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
C2CD3-204ENST00000414160 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
C2CD3-204ENST00000414160 P3H3Q8IVL6 736 aa14.23□□□□□ -0.13
C2CD3-204ENST00000414160 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
C2CD3-204ENST00000414160 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
C2CD3-204ENST00000414160 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
C2CD3-204ENST00000414160 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
C2CD3-204ENST00000414160 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
C2CD3-204ENST00000414160 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
C2CD3-204ENST00000414160 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
C2CD3-204ENST00000414160 CUL7Q14999 1698 aa14.18□□□□□ -0.14
C2CD3-204ENST00000414160 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
C2CD3-204ENST00000414160 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
C2CD3-204ENST00000414160 MAGI1Q96QZ7 1491 aaPredicted RBP14.17□□□□□ -0.14
C2CD3-204ENST00000414160 HNRNPUQ00839 825 aaKnown RBP eCLIP14.16□□□□□ -0.14
C2CD3-204ENST00000414160 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
C2CD3-204ENST00000414160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
C2CD3-204ENST00000414160 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
C2CD3-204ENST00000414160 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
C2CD3-204ENST00000414160 ADAMTS12P58397 1594 aa14.12□□□□□ -0.15
C2CD3-204ENST00000414160 FHOD3Q2V2M9 1422 aa14.11□□□□□ -0.15
C2CD3-204ENST00000414160 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
C2CD3-204ENST00000414160 CFAP43Q8NDM7 1665 aa14.11□□□□□ -0.15
C2CD3-204ENST00000414160 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
C2CD3-204ENST00000414160 SYNJ2O15056 1496 aa14.08□□□□□ -0.15
C2CD3-204ENST00000414160 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.16
C2CD3-204ENST00000414160 UACAQ9BZF9 1416 aa14.08□□□□□ -0.16
C2CD3-204ENST00000414160 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.16
C2CD3-204ENST00000414160 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.16
C2CD3-204ENST00000414160 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
C2CD3-204ENST00000414160 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
C2CD3-204ENST00000414160 WASHC2AQ641Q2 1341 aa14.06□□□□□ -0.16
C2CD3-204ENST00000414160 HSPA5P11021 654 aaKnown RBP14.05□□□□□ -0.16
C2CD3-204ENST00000414160 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
C2CD3-204ENST00000414160 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
C2CD3-204ENST00000414160 ERICH6Q7L0X2 663 aa14.04□□□□□ -0.16
C2CD3-204ENST00000414160 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
C2CD3-204ENST00000414160 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
C2CD3-204ENST00000414160 NAIPQ13075 1403 aa14.02□□□□□ -0.16
C2CD3-204ENST00000414160 GRIN2AQ12879 1464 aa14.02□□□□□ -0.17
C2CD3-204ENST00000414160 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
C2CD3-204ENST00000414160 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
C2CD3-204ENST00000414160 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
C2CD3-204ENST00000414160 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
C2CD3-204ENST00000414160 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
C2CD3-204ENST00000414160 EFCAB5A4FU69 1503 aa13.98□□□□□ -0.17
C2CD3-204ENST00000414160 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
C2CD3-204ENST00000414160 CHD1O14646 1710 aa13.97□□□□□ -0.17
C2CD3-204ENST00000414160 C11orf95C9JLR9 678 aaPredicted RBP13.97□□□□□ -0.17
C2CD3-204ENST00000414160 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
C2CD3-204ENST00000414160 FMN1Q68DA7 1419 aa13.96□□□□□ -0.17
C2CD3-204ENST00000414160 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
C2CD3-204ENST00000414160 NUP160Q12769 1436 aa13.96□□□□□ -0.18
C2CD3-204ENST00000414160 RRP7BPQ9NSQ0 103 aa13.95□□□□□ -0.18
C2CD3-204ENST00000414160 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
C2CD3-204ENST00000414160 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms