RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
C2CD3-204ENST00000414160 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
C2CD3-204ENST00000414160 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
C2CD3-204ENST00000414160 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
C2CD3-204ENST00000414160 HRCP23327 699 aa17.07■□□□□ 0.32
C2CD3-204ENST00000414160 ABCC9O60706 1549 aa17■□□□□ 0.31
C2CD3-204ENST00000414160 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
C2CD3-204ENST00000414160 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
C2CD3-204ENST00000414160 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
C2CD3-204ENST00000414160 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
C2CD3-204ENST00000414160 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
C2CD3-204ENST00000414160 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
C2CD3-204ENST00000414160 NACADO15069 1562 aa16.71■□□□□ 0.27
C2CD3-204ENST00000414160 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
C2CD3-204ENST00000414160 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.25
C2CD3-204ENST00000414160 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
C2CD3-204ENST00000414160 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
C2CD3-204ENST00000414160 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
C2CD3-204ENST00000414160 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
C2CD3-204ENST00000414160 ZEB1P37275 1124 aaPredicted RBP16.14■□□□□ 0.17
C2CD3-204ENST00000414160 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
C2CD3-204ENST00000414160 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
C2CD3-204ENST00000414160 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
C2CD3-204ENST00000414160 TRIM41Q8WV44 630 aa16■□□□□ 0.15
C2CD3-204ENST00000414160 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
C2CD3-204ENST00000414160 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
C2CD3-204ENST00000414160 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
C2CD3-204ENST00000414160 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
C2CD3-204ENST00000414160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
C2CD3-204ENST00000414160 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
C2CD3-204ENST00000414160 NEUROD1Q13562 356 aa15.66■□□□□ 0.1
C2CD3-204ENST00000414160 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
C2CD3-204ENST00000414160 CCER1Q8TC90 406 aaPredicted RBP15.64■□□□□ 0.09
C2CD3-204ENST00000414160 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
C2CD3-204ENST00000414160 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
C2CD3-204ENST00000414160 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
C2CD3-204ENST00000414160 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
C2CD3-204ENST00000414160 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
C2CD3-204ENST00000414160 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.07
C2CD3-204ENST00000414160 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
C2CD3-204ENST00000414160 CENPBP07199 599 aaPredicted RBP15.48■□□□□ 0.07
C2CD3-204ENST00000414160 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
C2CD3-204ENST00000414160 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
C2CD3-204ENST00000414160 WIZO95785 1651 aa15.42■□□□□ 0.06
C2CD3-204ENST00000414160 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
C2CD3-204ENST00000414160 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
C2CD3-204ENST00000414160 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
C2CD3-204ENST00000414160 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
C2CD3-204ENST00000414160 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
C2CD3-204ENST00000414160 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.04
C2CD3-204ENST00000414160 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
C2CD3-204ENST00000414160 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
C2CD3-204ENST00000414160 MYT1Q01538 1121 aa15.31■□□□□ 0.04
C2CD3-204ENST00000414160 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
C2CD3-204ENST00000414160 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
C2CD3-204ENST00000414160 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
C2CD3-204ENST00000414160 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
C2CD3-204ENST00000414160 SOGA1O94964 1423 aa15.24■□□□□ 0.03
C2CD3-204ENST00000414160 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
C2CD3-204ENST00000414160 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
C2CD3-204ENST00000414160 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.02
C2CD3-204ENST00000414160 MIER1Q8N108 512 aa15.2■□□□□ 0.02
C2CD3-204ENST00000414160 UBTFP17480 764 aaKnown RBP15.19■□□□□ 0.02
C2CD3-204ENST00000414160 AEBP2Q6ZN18 517 aaPredicted RBP15.19■□□□□ 0.02
C2CD3-204ENST00000414160 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
C2CD3-204ENST00000414160 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
C2CD3-204ENST00000414160 EEA1Q15075 1411 aa15.11■□□□□ 0.01
C2CD3-204ENST00000414160 GOLGA3Q08378 1498 aa15.06■□□□□ 0
C2CD3-204ENST00000414160 CLIP1P30622 1438 aa14.95□□□□□ -0.02
C2CD3-204ENST00000414160 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
C2CD3-204ENST00000414160 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
C2CD3-204ENST00000414160 CFTRP13569 1480 aa14.93□□□□□ -0.02
C2CD3-204ENST00000414160 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
C2CD3-204ENST00000414160 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
C2CD3-204ENST00000414160 APLP2Q06481 763 aa14.91□□□□□ -0.02
C2CD3-204ENST00000414160 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
C2CD3-204ENST00000414160 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
C2CD3-204ENST00000414160 KIF21BO75037 1637 aa14.86□□□□□ -0.03
C2CD3-204ENST00000414160 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
C2CD3-204ENST00000414160 SYNJ1O43426 1573 aa14.82□□□□□ -0.04
C2CD3-204ENST00000414160 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
C2CD3-204ENST00000414160 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
C2CD3-204ENST00000414160 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
C2CD3-204ENST00000414160 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
C2CD3-204ENST00000414160 NESP48681 1621 aa14.8□□□□□ -0.04
C2CD3-204ENST00000414160 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
C2CD3-204ENST00000414160 TSHZ2Q9NRE2 1034 aa14.74□□□□□ -0.05
C2CD3-204ENST00000414160 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
C2CD3-204ENST00000414160 SLC24A1O60721 1099 aa14.72□□□□□ -0.05
C2CD3-204ENST00000414160 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
C2CD3-204ENST00000414160 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
C2CD3-204ENST00000414160 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
C2CD3-204ENST00000414160 ARAP1Q96P48 1450 aa14.64□□□□□ -0.07
C2CD3-204ENST00000414160 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
C2CD3-204ENST00000414160 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
C2CD3-204ENST00000414160 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
C2CD3-204ENST00000414160 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
C2CD3-204ENST00000414160 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
C2CD3-204ENST00000414160 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
C2CD3-204ENST00000414160 CUX2O14529 1486 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms