RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
MCF2L-211ENST00000413354 PRG4Q92954 1404 aaPredicted RBP26.74■■□□□ 1.87
MCF2L-211ENST00000413354 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
MCF2L-211ENST00000413354 RAPGEF2Q9Y4G8 1499 aa26.65■■□□□ 1.86
MCF2L-211ENST00000413354 IQGAP2Q13576 1575 aa26.61■■□□□ 1.85
MCF2L-211ENST00000413354 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
MCF2L-211ENST00000413354 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
MCF2L-211ENST00000413354 CTTNBP2Q8WZ74 1663 aa26.5■■□□□ 1.83
MCF2L-211ENST00000413354 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
MCF2L-211ENST00000413354 UGGT2Q9NYU1 1516 aa26.44■■□□□ 1.82
MCF2L-211ENST00000413354 EEA1Q15075 1411 aa26.43■■□□□ 1.82
MCF2L-211ENST00000413354 ADCY10Q96PN6 1610 aa26.42■■□□□ 1.82
MCF2L-211ENST00000413354 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
MCF2L-211ENST00000413354 PTPRGP23470 1445 aa26.39■■□□□ 1.82
MCF2L-211ENST00000413354 DISP1Q96F81 1524 aa26.38■■□□□ 1.81
MCF2L-211ENST00000413354 KIAA0556O60303 1618 aa26.36■■□□□ 1.81
MCF2L-211ENST00000413354 NPM1P06748 294 aaKnown RBP eCLIP26.35■■□□□ 1.81
MCF2L-211ENST00000413354 CSRNP3Q8WYN3 585 aa26.33■■□□□ 1.81
MCF2L-211ENST00000413354 MAPKBP1O60336 1514 aa26.33■■□□□ 1.81
MCF2L-211ENST00000413354 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
MCF2L-211ENST00000413354 KIF13AQ9H1H9 1805 aa26.29■■□□□ 1.8
MCF2L-211ENST00000413354 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
MCF2L-211ENST00000413354 UHRF1BP1LA0JNW5 1464 aa26.25■■□□□ 1.79
MCF2L-211ENST00000413354 UACAQ9BZF9 1416 aa26.23■■□□□ 1.79
MCF2L-211ENST00000413354 ABCC2Q92887 1545 aa26.23■■□□□ 1.79
MCF2L-211ENST00000413354 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
MCF2L-211ENST00000413354 ABCC10Q5T3U5 1492 aa26.21■■□□□ 1.79
MCF2L-211ENST00000413354 DIP2BQ9P265 1576 aa26.18■■□□□ 1.78
MCF2L-211ENST00000413354 KIF21BO75037 1637 aa26.17■■□□□ 1.78
MCF2L-211ENST00000413354 FAM9AQ8IZU1 332 aaPredicted RBP26.13■■□□□ 1.77
MCF2L-211ENST00000413354 KDM5BQ9UGL1 1544 aa26.11■■□□□ 1.77
MCF2L-211ENST00000413354 FAM69CQ0P6D2 419 aa26.11■■□□□ 1.77
MCF2L-211ENST00000413354 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
MCF2L-211ENST00000413354 SAMD9Q5K651 1589 aa26.08■■□□□ 1.77
MCF2L-211ENST00000413354 ZCCHC11Q5TAX3 1644 aaKnown RBP26.08■■□□□ 1.77
MCF2L-211ENST00000413354 ASXL2Q76L83 1435 aa26.06■■□□□ 1.76
MCF2L-211ENST00000413354 ABCA8O94911 1581 aa26.06■■□□□ 1.76
MCF2L-211ENST00000413354 GLI2P10070 1586 aa26■■□□□ 1.75
MCF2L-211ENST00000413354 TSPOAP1O95153 1857 aa26■■□□□ 1.75
MCF2L-211ENST00000413354 EFCAB5A4FU69 1503 aa25.95■■□□□ 1.74
MCF2L-211ENST00000413354 P3H3Q8IVL6 736 aa25.94■■□□□ 1.74
MCF2L-211ENST00000413354 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
MCF2L-211ENST00000413354 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
MCF2L-211ENST00000413354 RAPGEF6Q8TEU7 1601 aa25.9■■□□□ 1.74
MCF2L-211ENST00000413354 MAP3K4Q9Y6R4 1608 aa25.88■■□□□ 1.73
MCF2L-211ENST00000413354 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
MCF2L-211ENST00000413354 RANGAP1P46060 587 aaPredicted RBP25.86■■□□□ 1.73
MCF2L-211ENST00000413354 FHOD3Q2V2M9 1422 aa25.86■■□□□ 1.73
MCF2L-211ENST00000413354 PPRC1Q5VV67 1664 aaKnown RBP25.86■■□□□ 1.73
MCF2L-211ENST00000413354 KDM6BO15054 1643 aa25.85■■□□□ 1.73
MCF2L-211ENST00000413354 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
MCF2L-211ENST00000413354 ATP10BO94823 1461 aa25.79■■□□□ 1.72
MCF2L-211ENST00000413354 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
MCF2L-211ENST00000413354 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
MCF2L-211ENST00000413354 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
MCF2L-211ENST00000413354 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
MCF2L-211ENST00000413354 KCNH8Q96L42 1107 aa25.7■■□□□ 1.7
MCF2L-211ENST00000413354 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
MCF2L-211ENST00000413354 CD109Q6YHK3 1445 aa25.69■■□□□ 1.7
MCF2L-211ENST00000413354 FMN1Q68DA7 1419 aa25.68■■□□□ 1.7
MCF2L-211ENST00000413354 MAGI3Q5TCQ9 1506 aa25.68■■□□□ 1.7
MCF2L-211ENST00000413354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
MCF2L-211ENST00000413354 HNRNPUL2Q1KMD3 747 aaKnown RBP25.66■■□□□ 1.7
MCF2L-211ENST00000413354 ABCA9Q8IUA7 1624 aa25.65■■□□□ 1.7
MCF2L-211ENST00000413354 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
MCF2L-211ENST00000413354 PLEKHD1A6NEE1 506 aa25.56■■□□□ 1.68
MCF2L-211ENST00000413354 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
MCF2L-211ENST00000413354 CDK13Q14004 1512 aaKnown RBP25.53■■□□□ 1.68
MCF2L-211ENST00000413354 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
MCF2L-211ENST00000413354 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
MCF2L-211ENST00000413354 CLIP1P30622 1438 aa25.47■■□□□ 1.67
MCF2L-211ENST00000413354 ATP1B4Q9UN42 357 aaPredicted RBP25.47■■□□□ 1.67
MCF2L-211ENST00000413354 NEO1Q92859 1461 aa25.47■■□□□ 1.67
MCF2L-211ENST00000413354 ARAP3Q8WWN8 1544 aa25.46■■□□□ 1.67
MCF2L-211ENST00000413354 PCF11O94913 1555 aaKnown RBP25.44■■□□□ 1.66
MCF2L-211ENST00000413354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.44■■□□□ 1.66
MCF2L-211ENST00000413354 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
MCF2L-211ENST00000413354 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
MCF2L-211ENST00000413354 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
MCF2L-211ENST00000413354 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
MCF2L-211ENST00000413354 TTC37Q6PGP7 1564 aa25.42■■□□□ 1.66
MCF2L-211ENST00000413354 CCDC18Q5T9S5 1454 aa25.4■■□□□ 1.66
MCF2L-211ENST00000413354 FYCO1Q9BQS8 1478 aa25.39■■□□□ 1.65
MCF2L-211ENST00000413354 KIF14Q15058 1648 aa25.37■■□□□ 1.65
MCF2L-211ENST00000413354 TROQ12816 1431 aaPredicted RBP25.36■■□□□ 1.65
MCF2L-211ENST00000413354 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
MCF2L-211ENST00000413354 FANCAO15360 1455 aa25.34■■□□□ 1.65
MCF2L-211ENST00000413354 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
MCF2L-211ENST00000413354 AKNAQ7Z591 1439 aa25.29■■□□□ 1.64
MCF2L-211ENST00000413354 PLCH2O75038 1416 aa25.28■■□□□ 1.64
MCF2L-211ENST00000413354 FRMPD1Q5SYB0 1578 aa25.27■■□□□ 1.64
MCF2L-211ENST00000413354 DENND4BO75064 1496 aaPredicted RBP25.26■■□□□ 1.63
MCF2L-211ENST00000413354 ADGRL1O94910 1474 aa25.26■■□□□ 1.63
MCF2L-211ENST00000413354 RICTORQ6R327 1708 aa25.26■■□□□ 1.63
MCF2L-211ENST00000413354 KDM4FA0A1W2PPD8 638 aa25.25■■□□□ 1.63
MCF2L-211ENST00000413354 RAPGEF3O95398 923 aa25.23■■□□□ 1.63
MCF2L-211ENST00000413354 ARHGAP5Q13017 1502 aa25.18■■□□□ 1.62
MCF2L-211ENST00000413354 ZMYM4Q5VZL5 1548 aa25.17■■□□□ 1.62
MCF2L-211ENST00000413354 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
MCF2L-211ENST00000413354 PREX2Q70Z35 1606 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 740.6 ms