RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 CUL7Q14999 1698 aa28.29■■■□□ 2.12
PMS2P4-201ENST00000412466 KIF13AQ9H1H9 1805 aa28.27■■■□□ 2.12
PMS2P4-201ENST00000412466 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
PMS2P4-201ENST00000412466 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
PMS2P4-201ENST00000412466 NPM1P06748 294 aaKnown RBP eCLIP28.17■■■□□ 2.1
PMS2P4-201ENST00000412466 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
PMS2P4-201ENST00000412466 MAPKBP1O60336 1514 aa28.15■■■□□ 2.1
PMS2P4-201ENST00000412466 IGF1RP08069 1367 aa28.13■■■□□ 2.09
PMS2P4-201ENST00000412466 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
PMS2P4-201ENST00000412466 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
PMS2P4-201ENST00000412466 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
PMS2P4-201ENST00000412466 FAM69CQ0P6D2 419 aa28.03■■■□□ 2.08
PMS2P4-201ENST00000412466 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
PMS2P4-201ENST00000412466 CARMIL2Q6F5E8 1435 aa27.97■■■□□ 2.07
PMS2P4-201ENST00000412466 IQGAP2Q13576 1575 aa27.95■■■□□ 2.07
PMS2P4-201ENST00000412466 PTPRGP23470 1445 aa27.93■■■□□ 2.06
PMS2P4-201ENST00000412466 TNIKQ9UKE5 1360 aa27.9■■■□□ 2.06
PMS2P4-201ENST00000412466 KDM6BO15054 1643 aa27.9■■■□□ 2.06
PMS2P4-201ENST00000412466 TSPOAP1O95153 1857 aa27.87■■■□□ 2.05
PMS2P4-201ENST00000412466 ABCC2Q92887 1545 aa27.85■■■□□ 2.05
PMS2P4-201ENST00000412466 TTBK1Q5TCY1 1321 aaPredicted RBP27.83■■■□□ 2.05
PMS2P4-201ENST00000412466 EEA1Q15075 1411 aa27.81■■■□□ 2.04
PMS2P4-201ENST00000412466 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
PMS2P4-201ENST00000412466 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
PMS2P4-201ENST00000412466 PLB1Q6P1J6 1458 aa27.77■■■□□ 2.04
PMS2P4-201ENST00000412466 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
PMS2P4-201ENST00000412466 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
PMS2P4-201ENST00000412466 UACAQ9BZF9 1416 aa27.74■■■□□ 2.03
PMS2P4-201ENST00000412466 UGGT2Q9NYU1 1516 aa27.73■■■□□ 2.03
PMS2P4-201ENST00000412466 GLI2P10070 1586 aa27.73■■■□□ 2.03
PMS2P4-201ENST00000412466 KIAA0556O60303 1618 aa27.7■■■□□ 2.02
PMS2P4-201ENST00000412466 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
PMS2P4-201ENST00000412466 CTTNBP2Q8WZ74 1663 aa27.65■■■□□ 2.02
PMS2P4-201ENST00000412466 KDM5BQ9UGL1 1544 aa27.64■■■□□ 2.02
PMS2P4-201ENST00000412466 PPRC1Q5VV67 1664 aaKnown RBP27.64■■■□□ 2.02
PMS2P4-201ENST00000412466 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
PMS2P4-201ENST00000412466 EPRSP07814 1512 aaKnown RBP27.58■■■□□ 2.01
PMS2P4-201ENST00000412466 MAP3K4Q9Y6R4 1608 aa27.57■■■□□ 2
PMS2P4-201ENST00000412466 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
PMS2P4-201ENST00000412466 GOLGA3Q08378 1498 aa27.56■■■□□ 2
PMS2P4-201ENST00000412466 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
PMS2P4-201ENST00000412466 PRXQ9BXM0 1461 aa27.54■■■□□ 2
PMS2P4-201ENST00000412466 KDM4FA0A1W2PPD8 638 aa27.49■■□□□ 1.99
PMS2P4-201ENST00000412466 WDR7Q9Y4E6 1490 aa27.49■■□□□ 1.99
PMS2P4-201ENST00000412466 KIF21BO75037 1637 aa27.43■■□□□ 1.98
PMS2P4-201ENST00000412466 ABCA8O94911 1581 aa27.41■■□□□ 1.98
PMS2P4-201ENST00000412466 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
PMS2P4-201ENST00000412466 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
PMS2P4-201ENST00000412466 COL17A1Q9UMD9 1497 aaPredicted RBP27.36■■□□□ 1.97
PMS2P4-201ENST00000412466 MAGI3Q5TCQ9 1506 aa27.31■■□□□ 1.96
PMS2P4-201ENST00000412466 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
PMS2P4-201ENST00000412466 KCNH8Q96L42 1107 aa27.24■■□□□ 1.95
PMS2P4-201ENST00000412466 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
PMS2P4-201ENST00000412466 SAMD9Q5K651 1589 aa27.19■■□□□ 1.94
PMS2P4-201ENST00000412466 RAPGEF6Q8TEU7 1601 aa27.13■■□□□ 1.93
PMS2P4-201ENST00000412466 P3H3Q8IVL6 736 aa27.13■■□□□ 1.93
PMS2P4-201ENST00000412466 ATP10BO94823 1461 aa27.13■■□□□ 1.93
PMS2P4-201ENST00000412466 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
PMS2P4-201ENST00000412466 ABCA9Q8IUA7 1624 aa27.11■■□□□ 1.93
PMS2P4-201ENST00000412466 ARID3CA6NKF2 412 aa27.1■■□□□ 1.93
PMS2P4-201ENST00000412466 ARAP3Q8WWN8 1544 aa27.09■■□□□ 1.93
PMS2P4-201ENST00000412466 HECW2Q9P2P5 1572 aa27.07■■□□□ 1.92
PMS2P4-201ENST00000412466 PHLDB1Q86UU1 1377 aa27.05■■□□□ 1.92
PMS2P4-201ENST00000412466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.99■■□□□ 1.91
PMS2P4-201ENST00000412466 HNRNPUL2Q1KMD3 747 aaKnown RBP26.99■■□□□ 1.91
PMS2P4-201ENST00000412466 NEO1Q92859 1461 aa26.99■■□□□ 1.91
PMS2P4-201ENST00000412466 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
PMS2P4-201ENST00000412466 NUP153P49790 1475 aaKnown RBP26.96■■□□□ 1.91
PMS2P4-201ENST00000412466 FHOD3Q2V2M9 1422 aa26.95■■□□□ 1.9
PMS2P4-201ENST00000412466 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
PMS2P4-201ENST00000412466 RANGAP1P46060 587 aaPredicted RBP26.9■■□□□ 1.9
PMS2P4-201ENST00000412466 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
PMS2P4-201ENST00000412466 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
PMS2P4-201ENST00000412466 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
PMS2P4-201ENST00000412466 ADAMTSL3P82987 1691 aa26.83■■□□□ 1.89
PMS2P4-201ENST00000412466 PLEKHD1A6NEE1 506 aa26.83■■□□□ 1.89
PMS2P4-201ENST00000412466 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
PMS2P4-201ENST00000412466 ARHGEF40Q8TER5 1519 aa26.81■■□□□ 1.88
PMS2P4-201ENST00000412466 CLIP1P30622 1438 aa26.8■■□□□ 1.88
PMS2P4-201ENST00000412466 BCORL1Q5H9F3 1711 aa26.79■■□□□ 1.88
PMS2P4-201ENST00000412466 ARHGAP35Q9NRY4 1499 aa26.79■■□□□ 1.88
PMS2P4-201ENST00000412466 DENND4BO75064 1496 aaPredicted RBP26.78■■□□□ 1.88
PMS2P4-201ENST00000412466 PTPRMP28827 1452 aa26.78■■□□□ 1.88
PMS2P4-201ENST00000412466 RICTORQ6R327 1708 aa26.77■■□□□ 1.88
PMS2P4-201ENST00000412466 CEP162Q5TB80 1403 aa26.77■■□□□ 1.88
PMS2P4-201ENST00000412466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.76■■□□□ 1.87
PMS2P4-201ENST00000412466 FANCAO15360 1455 aa26.76■■□□□ 1.87
PMS2P4-201ENST00000412466 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
PMS2P4-201ENST00000412466 ARID4BQ4LE39 1312 aaPredicted RBP26.75■■□□□ 1.87
PMS2P4-201ENST00000412466 AKNAQ7Z591 1439 aa26.73■■□□□ 1.87
PMS2P4-201ENST00000412466 MADDQ8WXG6 1647 aa26.73■■□□□ 1.87
PMS2P4-201ENST00000412466 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
PMS2P4-201ENST00000412466 HECW1Q76N89 1606 aa26.7■■□□□ 1.86
PMS2P4-201ENST00000412466 FMN1Q68DA7 1419 aa26.7■■□□□ 1.86
PMS2P4-201ENST00000412466 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.86
PMS2P4-201ENST00000412466 ZFYVE16Q7Z3T8 1539 aa26.66■■□□□ 1.86
PMS2P4-201ENST00000412466 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
PMS2P4-201ENST00000412466 POGZQ7Z3K3 1410 aa26.65■■□□□ 1.86
PMS2P4-201ENST00000412466 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
PMS2P4-201ENST00000412466 PCF11O94913 1555 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms