RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 NISCHQ9Y2I1 1504 aa40.42■■■■■ 4.06
PMS2P4-201ENST00000412466 CCDC180Q9P1Z9 1646 aa36.46■■■■□ 3.43
PMS2P4-201ENST00000412466 ABCC9O60706 1549 aa36.42■■■■□ 3.42
PMS2P4-201ENST00000412466 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
PMS2P4-201ENST00000412466 NACADO15069 1562 aa34.44■■■■□ 3.1
PMS2P4-201ENST00000412466 DCAF8L2P0C7V8 631 aa34.09■■■■□ 3.05
PMS2P4-201ENST00000412466 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
PMS2P4-201ENST00000412466 MYO15BQ96JP2 1530 aa33.92■■■■□ 3.02
PMS2P4-201ENST00000412466 UNC13AQ9UPW8 1703 aa33.89■■■■□ 3.02
PMS2P4-201ENST00000412466 PABPN1Q86U42 306 aaKnown RBP eCLIP33.79■■■■□ 3
PMS2P4-201ENST00000412466 BICRAQ9NZM4 1560 aa33.6■■■□□ 2.97
PMS2P4-201ENST00000412466 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
PMS2P4-201ENST00000412466 DCAF1Q9Y4B6 1507 aa33.44■■■□□ 2.94
PMS2P4-201ENST00000412466 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
PMS2P4-201ENST00000412466 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
PMS2P4-201ENST00000412466 CC2D2AQ9P2K1 1620 aa32.93■■■□□ 2.86
PMS2P4-201ENST00000412466 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
PMS2P4-201ENST00000412466 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
PMS2P4-201ENST00000412466 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
PMS2P4-201ENST00000412466 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
PMS2P4-201ENST00000412466 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
PMS2P4-201ENST00000412466 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
PMS2P4-201ENST00000412466 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
PMS2P4-201ENST00000412466 ERCC6Q03468 1493 aa31.54■■■□□ 2.64
PMS2P4-201ENST00000412466 CUX2O14529 1486 aa31.52■■■□□ 2.64
PMS2P4-201ENST00000412466 DNAJC5Q9H3Z4 198 aa31.48■■■□□ 2.63
PMS2P4-201ENST00000412466 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
PMS2P4-201ENST00000412466 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
PMS2P4-201ENST00000412466 PEG3Q9GZU2 1588 aa31.3■■■□□ 2.6
PMS2P4-201ENST00000412466 NESP48681 1621 aa31.22■■■□□ 2.59
PMS2P4-201ENST00000412466 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
PMS2P4-201ENST00000412466 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
PMS2P4-201ENST00000412466 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
PMS2P4-201ENST00000412466 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
PMS2P4-201ENST00000412466 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
PMS2P4-201ENST00000412466 WIZO95785 1651 aa30.76■■■□□ 2.51
PMS2P4-201ENST00000412466 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
PMS2P4-201ENST00000412466 MRC2Q9UBG0 1479 aa30.65■■■□□ 2.5
PMS2P4-201ENST00000412466 WDR62O43379 1518 aa30.58■■■□□ 2.49
PMS2P4-201ENST00000412466 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
PMS2P4-201ENST00000412466 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
PMS2P4-201ENST00000412466 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
PMS2P4-201ENST00000412466 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
PMS2P4-201ENST00000412466 CFTRP13569 1480 aa30.38■■■□□ 2.45
PMS2P4-201ENST00000412466 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
PMS2P4-201ENST00000412466 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
PMS2P4-201ENST00000412466 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
PMS2P4-201ENST00000412466 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
PMS2P4-201ENST00000412466 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
PMS2P4-201ENST00000412466 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
PMS2P4-201ENST00000412466 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
PMS2P4-201ENST00000412466 TOPBP1Q92547 1522 aa29.84■■■□□ 2.37
PMS2P4-201ENST00000412466 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
PMS2P4-201ENST00000412466 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
PMS2P4-201ENST00000412466 ZNF608Q9ULD9 1512 aaPredicted RBP29.77■■■□□ 2.36
PMS2P4-201ENST00000412466 EIF4G3O43432 1585 aaKnown RBP29.72■■■□□ 2.35
PMS2P4-201ENST00000412466 RIMBP3CA6NJZ7 1639 aa29.66■■■□□ 2.34
PMS2P4-201ENST00000412466 RIMBP3BA6NNM3 1639 aa29.66■■■□□ 2.34
PMS2P4-201ENST00000412466 RIMBP3Q9UFD9 1639 aa29.66■■■□□ 2.34
PMS2P4-201ENST00000412466 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
PMS2P4-201ENST00000412466 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
PMS2P4-201ENST00000412466 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
PMS2P4-201ENST00000412466 CHD1O14646 1710 aa29.52■■■□□ 2.32
PMS2P4-201ENST00000412466 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.312e-8■■■■■ 35.8
PMS2P4-201ENST00000412466 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
PMS2P4-201ENST00000412466 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
PMS2P4-201ENST00000412466 SOGA1O94964 1423 aa29.36■■■□□ 2.29
PMS2P4-201ENST00000412466 FBLN2P98095 1184 aa29.34■■■□□ 2.29
PMS2P4-201ENST00000412466 FGD5Q6ZNL6 1462 aa29.33■■■□□ 2.29
PMS2P4-201ENST00000412466 TDRD9Q8NDG6 1382 aaKnown RBP29.27■■■□□ 2.28
PMS2P4-201ENST00000412466 CUX1P39880 1505 aa29.26■■■□□ 2.27
PMS2P4-201ENST00000412466 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
PMS2P4-201ENST00000412466 CYB5RLQ6IPT4 315 aa29.24■■■□□ 2.27
PMS2P4-201ENST00000412466 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
PMS2P4-201ENST00000412466 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
PMS2P4-201ENST00000412466 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
PMS2P4-201ENST00000412466 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
PMS2P4-201ENST00000412466 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
PMS2P4-201ENST00000412466 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
PMS2P4-201ENST00000412466 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
PMS2P4-201ENST00000412466 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
PMS2P4-201ENST00000412466 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
PMS2P4-201ENST00000412466 TRHP20396 242 aaPredicted RBP29.01■■■□□ 2.23
PMS2P4-201ENST00000412466 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
PMS2P4-201ENST00000412466 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
PMS2P4-201ENST00000412466 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
PMS2P4-201ENST00000412466 BIVM-ERCC5R4GMW8 1640 aa28.84■■■□□ 2.21
PMS2P4-201ENST00000412466 TOP2BQ02880 1626 aa28.82■■■□□ 2.2
PMS2P4-201ENST00000412466 ADAMTS12P58397 1594 aa28.81■■■□□ 2.2
PMS2P4-201ENST00000412466 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
PMS2P4-201ENST00000412466 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
PMS2P4-201ENST00000412466 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
PMS2P4-201ENST00000412466 NUP160Q12769 1436 aa28.68■■■□□ 2.18
PMS2P4-201ENST00000412466 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
PMS2P4-201ENST00000412466 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
PMS2P4-201ENST00000412466 ERCC6L2Q5T890 1561 aa28.6■■■□□ 2.17
PMS2P4-201ENST00000412466 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
PMS2P4-201ENST00000412466 PRG4Q92954 1404 aaPredicted RBP28.4■■■□□ 2.14
PMS2P4-201ENST00000412466 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
PMS2P4-201ENST00000412466 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms