RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 PPP1R15AO75807 674 aaPredicted RBP23.38■■□□□ 1.33
COPS7B-206ENST00000410017 NEFLP07196 543 aa23.37■■□□□ 1.33
COPS7B-206ENST00000410017 BCANQ96GW7 911 aa23.36■■□□□ 1.33
COPS7B-206ENST00000410017 RBM19Q9Y4C8 960 aaKnown RBP23.36■■□□□ 1.33
COPS7B-206ENST00000410017 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
COPS7B-206ENST00000410017 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
COPS7B-206ENST00000410017 CUX1P39880 1505 aa23.3■■□□□ 1.32
COPS7B-206ENST00000410017 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
COPS7B-206ENST00000410017 ITGAEP38570 1179 aa23.29■■□□□ 1.32
COPS7B-206ENST00000410017 NESP48681 1621 aa23.23■■□□□ 1.31
COPS7B-206ENST00000410017 ANP32CO43423 234 aa23.23■■□□□ 1.31
COPS7B-206ENST00000410017 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
COPS7B-206ENST00000410017 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
COPS7B-206ENST00000410017 PHLDB1Q86UU1 1377 aa23.16■■□□□ 1.3
COPS7B-206ENST00000410017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.29
COPS7B-206ENST00000410017 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
COPS7B-206ENST00000410017 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
COPS7B-206ENST00000410017 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
COPS7B-206ENST00000410017 IGF1RP08069 1367 aa23.1■■□□□ 1.29
COPS7B-206ENST00000410017 CFTRP13569 1480 aa23.1■■□□□ 1.29
COPS7B-206ENST00000410017 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
COPS7B-206ENST00000410017 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.28
COPS7B-206ENST00000410017 MSH5O43196 834 aa23.06■■□□□ 1.28
COPS7B-206ENST00000410017 FAM50AQ14320 339 aaKnown RBP23.05■■□□□ 1.28
COPS7B-206ENST00000410017 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
COPS7B-206ENST00000410017 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
COPS7B-206ENST00000410017 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
COPS7B-206ENST00000410017 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
COPS7B-206ENST00000410017 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
COPS7B-206ENST00000410017 TONSLQ96HA7 1378 aa22.96■■□□□ 1.27
COPS7B-206ENST00000410017 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
COPS7B-206ENST00000410017 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
COPS7B-206ENST00000410017 PCF11O94913 1555 aaKnown RBP22.93■■□□□ 1.26
COPS7B-206ENST00000410017 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.262e-6■■■■■ 29.8
COPS7B-206ENST00000410017 FYCO1Q9BQS8 1478 aa22.91■■□□□ 1.26
COPS7B-206ENST00000410017 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
COPS7B-206ENST00000410017 UACAQ9BZF9 1416 aa22.89■■□□□ 1.26
COPS7B-206ENST00000410017 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
COPS7B-206ENST00000410017 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
COPS7B-206ENST00000410017 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
COPS7B-206ENST00000410017 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
COPS7B-206ENST00000410017 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
COPS7B-206ENST00000410017 ERICH6Q7L0X2 663 aa22.86■■□□□ 1.25
COPS7B-206ENST00000410017 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
COPS7B-206ENST00000410017 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
COPS7B-206ENST00000410017 EFCAB5A4FU69 1503 aa22.85■■□□□ 1.25
COPS7B-206ENST00000410017 PPP4R2Q9NY27 417 aa22.84■■□□□ 1.25
COPS7B-206ENST00000410017 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
COPS7B-206ENST00000410017 FGD6Q6ZV73 1430 aa22.83■■□□□ 1.24
COPS7B-206ENST00000410017 KDM5BQ9UGL1 1544 aa22.79■■□□□ 1.24
COPS7B-206ENST00000410017 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
COPS7B-206ENST00000410017 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
COPS7B-206ENST00000410017 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
COPS7B-206ENST00000410017 NAIPQ13075 1403 aa22.72■■□□□ 1.23
COPS7B-206ENST00000410017 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
COPS7B-206ENST00000410017 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
COPS7B-206ENST00000410017 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
COPS7B-206ENST00000410017 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
COPS7B-206ENST00000410017 IRX6P78412 446 aaPredicted RBP22.71■■□□□ 1.23
COPS7B-206ENST00000410017 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
COPS7B-206ENST00000410017 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
COPS7B-206ENST00000410017 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
COPS7B-206ENST00000410017 CNTLNQ9NXG0 1405 aa22.67■■□□□ 1.22
COPS7B-206ENST00000410017 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
COPS7B-206ENST00000410017 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
COPS7B-206ENST00000410017 ZBED9Q6R2W3 1325 aa22.63■■□□□ 1.21
COPS7B-206ENST00000410017 EIF4G2P78344 907 aaKnown RBP eCLIP22.63■■□□□ 1.21
COPS7B-206ENST00000410017 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
COPS7B-206ENST00000410017 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
COPS7B-206ENST00000410017 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
COPS7B-206ENST00000410017 CUL7Q14999 1698 aa22.59■■□□□ 1.21
COPS7B-206ENST00000410017 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
COPS7B-206ENST00000410017 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.21
COPS7B-206ENST00000410017 PRKRIP1Q9H875 184 aaPredicted RBP22.58■■□□□ 1.21
COPS7B-206ENST00000410017 WDR62O43379 1518 aa22.57■■□□□ 1.2
COPS7B-206ENST00000410017 DEKP35659 375 aaKnown RBP22.57■■□□□ 1.2
COPS7B-206ENST00000410017 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
COPS7B-206ENST00000410017 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
COPS7B-206ENST00000410017 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
COPS7B-206ENST00000410017 CCDC184Q52MB2 194 aa22.54■■□□□ 1.2
COPS7B-206ENST00000410017 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
COPS7B-206ENST00000410017 CCDC7Q96M83 1385 aa22.53■■□□□ 1.2
COPS7B-206ENST00000410017 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
COPS7B-206ENST00000410017 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
COPS7B-206ENST00000410017 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
COPS7B-206ENST00000410017 DENND4BO75064 1496 aaPredicted RBP22.51■■□□□ 1.19
COPS7B-206ENST00000410017 GCC2Q8IWJ2 1684 aa22.5■■□□□ 1.19
COPS7B-206ENST00000410017 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
COPS7B-206ENST00000410017 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
COPS7B-206ENST00000410017 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
COPS7B-206ENST00000410017 TOPBP1Q92547 1522 aa22.5■■□□□ 1.19
COPS7B-206ENST00000410017 MRS2Q9HD23 443 aa22.5■■□□□ 1.19
COPS7B-206ENST00000410017 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
COPS7B-206ENST00000410017 UGGT2Q9NYU1 1516 aa22.48■■□□□ 1.19
COPS7B-206ENST00000410017 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
COPS7B-206ENST00000410017 FAM9BQ8IZU0 186 aa22.47■■□□□ 1.19
COPS7B-206ENST00000410017 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
COPS7B-206ENST00000410017 LRRIQ1Q96JM4 1722 aa22.45■■□□□ 1.18
COPS7B-206ENST00000410017 C11orf95C9JLR9 678 aaPredicted RBP22.44■■□□□ 1.18
COPS7B-206ENST00000410017 RNF123Q5XPI4 1314 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms