RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
LSM5-204ENST00000409909 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
LSM5-204ENST00000409909 KIAA0586Q9BVV6 1533 aa30.3■■■□□ 2.44
LSM5-204ENST00000409909 TRHP20396 242 aaPredicted RBP30.29■■■□□ 2.44
LSM5-204ENST00000409909 RAPGEF2Q9Y4G8 1499 aa30.13■■■□□ 2.41
LSM5-204ENST00000409909 IQGAP2Q13576 1575 aa30.05■■■□□ 2.4
LSM5-204ENST00000409909 PRXQ9BXM0 1461 aa29.96■■■□□ 2.39
LSM5-204ENST00000409909 CARMIL2Q6F5E8 1435 aa29.96■■■□□ 2.39
LSM5-204ENST00000409909 ADCY10Q96PN6 1610 aa29.95■■■□□ 2.38
LSM5-204ENST00000409909 PTPRGP23470 1445 aa29.94■■■□□ 2.38
LSM5-204ENST00000409909 DISP1Q96F81 1524 aa29.91■■■□□ 2.38
LSM5-204ENST00000409909 TNIKQ9UKE5 1360 aa29.91■■■□□ 2.38
LSM5-204ENST00000409909 UGGT2Q9NYU1 1516 aa29.9■■■□□ 2.38
LSM5-204ENST00000409909 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
LSM5-204ENST00000409909 NPM1P06748 294 aaKnown RBP eCLIP29.87■■■□□ 2.37
LSM5-204ENST00000409909 CSRNP3Q8WYN3 585 aa29.85■■■□□ 2.37
LSM5-204ENST00000409909 CTTNBP2Q8WZ74 1663 aa29.84■■■□□ 2.37
LSM5-204ENST00000409909 MAPKBP1O60336 1514 aa29.8■■■□□ 2.36
LSM5-204ENST00000409909 KIF13AQ9H1H9 1805 aa29.79■■■□□ 2.36
LSM5-204ENST00000409909 KIAA0556O60303 1618 aa29.78■■■□□ 2.36
LSM5-204ENST00000409909 EEA1Q15075 1411 aa29.74■■■□□ 2.35
LSM5-204ENST00000409909 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
LSM5-204ENST00000409909 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
LSM5-204ENST00000409909 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
LSM5-204ENST00000409909 UHRF1BP1LA0JNW5 1464 aa29.71■■■□□ 2.35
LSM5-204ENST00000409909 ABCC2Q92887 1545 aa29.71■■■□□ 2.35
LSM5-204ENST00000409909 FAM69CQ0P6D2 419 aa29.7■■■□□ 2.35
LSM5-204ENST00000409909 FAM9AQ8IZU1 332 aaPredicted RBP29.69■■■□□ 2.34
LSM5-204ENST00000409909 GOLGA3Q08378 1498 aa29.67■■■□□ 2.34
LSM5-204ENST00000409909 DIP2BQ9P265 1576 aa29.66■■■□□ 2.34
LSM5-204ENST00000409909 KDM5BQ9UGL1 1544 aa29.58■■■□□ 2.33
LSM5-204ENST00000409909 ASXL2Q76L83 1435 aa29.57■■■□□ 2.32
LSM5-204ENST00000409909 PLB1Q6P1J6 1458 aa29.56■■■□□ 2.32
LSM5-204ENST00000409909 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
LSM5-204ENST00000409909 ZCCHC11Q5TAX3 1644 aaKnown RBP29.5■■■□□ 2.31
LSM5-204ENST00000409909 ABCA8O94911 1581 aa29.5■■■□□ 2.31
LSM5-204ENST00000409909 KIF21BO75037 1637 aa29.49■■■□□ 2.31
LSM5-204ENST00000409909 SAMD9Q5K651 1589 aa29.47■■■□□ 2.31
LSM5-204ENST00000409909 TSPOAP1O95153 1857 aa29.44■■■□□ 2.3
LSM5-204ENST00000409909 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
LSM5-204ENST00000409909 GLI2P10070 1586 aa29.42■■■□□ 2.3
LSM5-204ENST00000409909 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
LSM5-204ENST00000409909 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
LSM5-204ENST00000409909 WDR7Q9Y4E6 1490 aa29.34■■■□□ 2.29
LSM5-204ENST00000409909 PPRC1Q5VV67 1664 aaKnown RBP29.32■■■□□ 2.28
LSM5-204ENST00000409909 FHOD3Q2V2M9 1422 aa29.3■■■□□ 2.28
LSM5-204ENST00000409909 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
LSM5-204ENST00000409909 MAP3K4Q9Y6R4 1608 aa29.28■■■□□ 2.28
LSM5-204ENST00000409909 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
LSM5-204ENST00000409909 ATP10BO94823 1461 aa29.28■■■□□ 2.28
LSM5-204ENST00000409909 KDM6BO15054 1643 aa29.27■■■□□ 2.28
LSM5-204ENST00000409909 RAPGEF6Q8TEU7 1601 aa29.25■■■□□ 2.27
LSM5-204ENST00000409909 KCNH8Q96L42 1107 aa29.25■■■□□ 2.27
LSM5-204ENST00000409909 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
LSM5-204ENST00000409909 NUP153P49790 1475 aaKnown RBP29.17■■■□□ 2.26
LSM5-204ENST00000409909 TEX14Q8IWB6 1497 aa29.13■■■□□ 2.25
LSM5-204ENST00000409909 CD109Q6YHK3 1445 aa29.12■■■□□ 2.25
LSM5-204ENST00000409909 COL17A1Q9UMD9 1497 aaPredicted RBP29.12■■■□□ 2.25
LSM5-204ENST00000409909 CFAP43Q8NDM7 1665 aa29.11■■■□□ 2.25
LSM5-204ENST00000409909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
LSM5-204ENST00000409909 HNRNPUL2Q1KMD3 747 aaKnown RBP29.1■■■□□ 2.25
LSM5-204ENST00000409909 ARHGAP35Q9NRY4 1499 aa29.09■■■□□ 2.25
LSM5-204ENST00000409909 MAGI3Q5TCQ9 1506 aa29.08■■■□□ 2.25
LSM5-204ENST00000409909 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
LSM5-204ENST00000409909 ABCA9Q8IUA7 1624 aa28.99■■■□□ 2.23
LSM5-204ENST00000409909 FMN1Q68DA7 1419 aa28.97■■■□□ 2.23
LSM5-204ENST00000409909 PLEKHD1A6NEE1 506 aa28.96■■■□□ 2.23
LSM5-204ENST00000409909 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
LSM5-204ENST00000409909 ATP1B4Q9UN42 357 aaPredicted RBP28.9■■■□□ 2.22
LSM5-204ENST00000409909 HECW1Q76N89 1606 aa28.87■■■□□ 2.21
LSM5-204ENST00000409909 KDM4FA0A1W2PPD8 638 aa28.86■■■□□ 2.21
LSM5-204ENST00000409909 ARAP3Q8WWN8 1544 aa28.85■■■□□ 2.21
LSM5-204ENST00000409909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.81■■■□□ 2.2
LSM5-204ENST00000409909 PHLDB1Q86UU1 1377 aa28.81■■■□□ 2.2
LSM5-204ENST00000409909 NEO1Q92859 1461 aa28.78■■■□□ 2.2
LSM5-204ENST00000409909 CLIP1P30622 1438 aa28.77■■■□□ 2.2
LSM5-204ENST00000409909 LRRIQ1Q96JM4 1722 aa28.77■■■□□ 2.2
LSM5-204ENST00000409909 TTC37Q6PGP7 1564 aa28.77■■■□□ 2.2
LSM5-204ENST00000409909 CASKIN1Q8WXD9 1431 aa28.74■■■□□ 2.19
LSM5-204ENST00000409909 RAPGEF3O95398 923 aa28.73■■■□□ 2.19
LSM5-204ENST00000409909 CDK11AQ9UQ88 783 aaPredicted RBP28.73■■■□□ 2.19
LSM5-204ENST00000409909 PCF11O94913 1555 aaKnown RBP28.72■■■□□ 2.19
LSM5-204ENST00000409909 FANCAO15360 1455 aa28.68■■■□□ 2.18
LSM5-204ENST00000409909 ADGRL1O94910 1474 aa28.68■■■□□ 2.18
LSM5-204ENST00000409909 TROQ12816 1431 aaPredicted RBP28.67■■■□□ 2.18
LSM5-204ENST00000409909 AKNAQ7Z591 1439 aa28.67■■■□□ 2.18
LSM5-204ENST00000409909 FRMPD1Q5SYB0 1578 aa28.65■■■□□ 2.18
LSM5-204ENST00000409909 KIF14Q15058 1648 aa28.65■■■□□ 2.18
LSM5-204ENST00000409909 PLCH2O75038 1416 aa28.64■■■□□ 2.18
LSM5-204ENST00000409909 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
LSM5-204ENST00000409909 FYCO1Q9BQS8 1478 aa28.63■■■□□ 2.17
LSM5-204ENST00000409909 CFAP74Q9C0B2 1584 aa28.62■■■□□ 2.17
LSM5-204ENST00000409909 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
LSM5-204ENST00000409909 CEP162Q5TB80 1403 aa28.56■■■□□ 2.16
LSM5-204ENST00000409909 RICTORQ6R327 1708 aa28.56■■■□□ 2.16
LSM5-204ENST00000409909 MYO5CQ9NQX4 1742 aa28.56■■■□□ 2.16
LSM5-204ENST00000409909 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
LSM5-204ENST00000409909 EFCAB2Q5VUJ9 269 aa28.53■■■□□ 2.16
LSM5-204ENST00000409909 SCAPERQ9BY12 1400 aa28.51■■■□□ 2.15
LSM5-204ENST00000409909 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms