RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 CHD1O14646 1710 aa22.62■■□□□ 1.21
MINDY4-202ENST00000409881 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
MINDY4-202ENST00000409881 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
MINDY4-202ENST00000409881 NUP160Q12769 1436 aa22.51■■□□□ 1.19
MINDY4-202ENST00000409881 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
MINDY4-202ENST00000409881 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
MINDY4-202ENST00000409881 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
MINDY4-202ENST00000409881 IQGAP2Q13576 1575 aa22.44■■□□□ 1.18
MINDY4-202ENST00000409881 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
MINDY4-202ENST00000409881 OSCARQ8IYS5 282 aa22.39■■□□□ 1.18
MINDY4-202ENST00000409881 CLIP1P30622 1438 aa22.37■■□□□ 1.17
MINDY4-202ENST00000409881 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
MINDY4-202ENST00000409881 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
MINDY4-202ENST00000409881 JPH4Q96JJ6 628 aa22.33■■□□□ 1.16
MINDY4-202ENST00000409881 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
MINDY4-202ENST00000409881 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
MINDY4-202ENST00000409881 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
MINDY4-202ENST00000409881 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
MINDY4-202ENST00000409881 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.16
MINDY4-202ENST00000409881 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
MINDY4-202ENST00000409881 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
MINDY4-202ENST00000409881 PRG4Q92954 1404 aaPredicted RBP22.24■■□□□ 1.15
MINDY4-202ENST00000409881 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
MINDY4-202ENST00000409881 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
MINDY4-202ENST00000409881 KIAA0556O60303 1618 aa22.21■■□□□ 1.15
MINDY4-202ENST00000409881 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
MINDY4-202ENST00000409881 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
MINDY4-202ENST00000409881 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
MINDY4-202ENST00000409881 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
MINDY4-202ENST00000409881 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
MINDY4-202ENST00000409881 VPS8Q8N3P4 1428 aa22.09■■□□□ 1.13
MINDY4-202ENST00000409881 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
MINDY4-202ENST00000409881 PTPRGP23470 1445 aa22.05■■□□□ 1.12
MINDY4-202ENST00000409881 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
MINDY4-202ENST00000409881 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
MINDY4-202ENST00000409881 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
MINDY4-202ENST00000409881 PCF11O94913 1555 aaKnown RBP22■■□□□ 1.11
MINDY4-202ENST00000409881 PLB1Q6P1J6 1458 aa21.97■■□□□ 1.11
MINDY4-202ENST00000409881 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
MINDY4-202ENST00000409881 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
MINDY4-202ENST00000409881 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
MINDY4-202ENST00000409881 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
MINDY4-202ENST00000409881 FYCO1Q9BQS8 1478 aa21.94■■□□□ 1.1
MINDY4-202ENST00000409881 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
MINDY4-202ENST00000409881 ABCA8O94911 1581 aa21.91■■□□□ 1.1
MINDY4-202ENST00000409881 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
MINDY4-202ENST00000409881 UACAQ9BZF9 1416 aa21.9■■□□□ 1.1
MINDY4-202ENST00000409881 HECW1Q76N89 1606 aa21.9■■□□□ 1.1
MINDY4-202ENST00000409881 APLP2Q06481 763 aa21.88■■□□□ 1.09
MINDY4-202ENST00000409881 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
MINDY4-202ENST00000409881 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
MINDY4-202ENST00000409881 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
MINDY4-202ENST00000409881 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.08
MINDY4-202ENST00000409881 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
MINDY4-202ENST00000409881 CDK13Q14004 1512 aaKnown RBP21.82■■□□□ 1.08
MINDY4-202ENST00000409881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
MINDY4-202ENST00000409881 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
MINDY4-202ENST00000409881 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
MINDY4-202ENST00000409881 CCDC18Q5T9S5 1454 aa21.81■■□□□ 1.08
MINDY4-202ENST00000409881 ADCY10Q96PN6 1610 aa21.8■■□□□ 1.08
MINDY4-202ENST00000409881 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
MINDY4-202ENST00000409881 TIAM1Q13009 1591 aa21.79■■□□□ 1.08
MINDY4-202ENST00000409881 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
MINDY4-202ENST00000409881 ATP10BO94823 1461 aa21.76■■□□□ 1.07
MINDY4-202ENST00000409881 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
MINDY4-202ENST00000409881 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
MINDY4-202ENST00000409881 KDM5BQ9UGL1 1544 aa21.72■■□□□ 1.07
MINDY4-202ENST00000409881 ZCCHC11Q5TAX3 1644 aaKnown RBP21.71■■□□□ 1.07
MINDY4-202ENST00000409881 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
MINDY4-202ENST00000409881 LRRC9Q6ZRR7 1453 aa21.69■■□□□ 1.06
MINDY4-202ENST00000409881 NPM1P06748 294 aaKnown RBP eCLIP21.69■■□□□ 1.06
MINDY4-202ENST00000409881 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
MINDY4-202ENST00000409881 MAGI3Q5TCQ9 1506 aa21.67■■□□□ 1.06
MINDY4-202ENST00000409881 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
MINDY4-202ENST00000409881 EHBP1L1Q8N3D4 1523 aa21.63■■□□□ 1.05
MINDY4-202ENST00000409881 TROQ12816 1431 aaPredicted RBP21.61■■□□□ 1.05
MINDY4-202ENST00000409881 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
MINDY4-202ENST00000409881 ASXL2Q76L83 1435 aa21.58■■□□□ 1.04
MINDY4-202ENST00000409881 NEUROD1Q13562 356 aa21.56■■□□□ 1.04
MINDY4-202ENST00000409881 WDR7Q9Y4E6 1490 aa21.55■■□□□ 1.04
MINDY4-202ENST00000409881 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
MINDY4-202ENST00000409881 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
MINDY4-202ENST00000409881 KIF14Q15058 1648 aa21.54■■□□□ 1.04
MINDY4-202ENST00000409881 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
MINDY4-202ENST00000409881 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
MINDY4-202ENST00000409881 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
MINDY4-202ENST00000409881 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
MINDY4-202ENST00000409881 ABCC10Q5T3U5 1492 aa21.44■■□□□ 1.02
MINDY4-202ENST00000409881 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
MINDY4-202ENST00000409881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.02
MINDY4-202ENST00000409881 MYT1Q01538 1121 aa21.43■■□□□ 1.02
MINDY4-202ENST00000409881 TTC37Q6PGP7 1564 aa21.43■■□□□ 1.02
MINDY4-202ENST00000409881 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
MINDY4-202ENST00000409881 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
MINDY4-202ENST00000409881 ABCA9Q8IUA7 1624 aa21.36■■□□□ 1.01
MINDY4-202ENST00000409881 FGD6Q6ZV73 1430 aa21.35■■□□□ 1.01
MINDY4-202ENST00000409881 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
MINDY4-202ENST00000409881 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
MINDY4-202ENST00000409881 DIP2BQ9P265 1576 aa21.34■■□□□ 1.01
MINDY4-202ENST00000409881 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms