RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CEP162Q5TB80 1403 aa27.12■■□□□ 1.93
SSB-202ENST00000409333 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
SSB-202ENST00000409333 IQGAP2Q13576 1575 aa27.03■■□□□ 1.92
SSB-202ENST00000409333 NUP160Q12769 1436 aa27.03■■□□□ 1.92
SSB-202ENST00000409333 RANGAP1P46060 587 aaPredicted RBP27.02■■□□□ 1.92
SSB-202ENST00000409333 CLIP1P30622 1438 aa27■■□□□ 1.91
SSB-202ENST00000409333 KIAA0586Q9BVV6 1533 aa26.98■■□□□ 1.91
SSB-202ENST00000409333 ARHGAP35Q9NRY4 1499 aa26.92■■□□□ 1.9
SSB-202ENST00000409333 SAMD9Q5K651 1589 aa26.9■■□□□ 1.9
SSB-202ENST00000409333 EFCAB5A4FU69 1503 aa26.88■■□□□ 1.89
SSB-202ENST00000409333 UGGT2Q9NYU1 1516 aa26.87■■□□□ 1.89
SSB-202ENST00000409333 CLASP1Q7Z460 1538 aa26.86■■□□□ 1.89
SSB-202ENST00000409333 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
SSB-202ENST00000409333 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
SSB-202ENST00000409333 KIAA0556O60303 1618 aa26.78■■□□□ 1.88
SSB-202ENST00000409333 DISP1Q96F81 1524 aa26.77■■□□□ 1.88
SSB-202ENST00000409333 FHOD3Q2V2M9 1422 aa26.76■■□□□ 1.87
SSB-202ENST00000409333 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
SSB-202ENST00000409333 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
SSB-202ENST00000409333 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.87
SSB-202ENST00000409333 OSCARQ8IYS5 282 aa26.68■■□□□ 1.86
SSB-202ENST00000409333 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
SSB-202ENST00000409333 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.85
SSB-202ENST00000409333 CARMIL2Q6F5E8 1435 aa26.63■■□□□ 1.85
SSB-202ENST00000409333 PCF11O94913 1555 aaKnown RBP26.61■■□□□ 1.85
SSB-202ENST00000409333 FMN1Q68DA7 1419 aa26.58■■□□□ 1.85
SSB-202ENST00000409333 LRRIQ1Q96JM4 1722 aa26.53■■□□□ 1.84
SSB-202ENST00000409333 TTBK1Q5TCY1 1321 aaPredicted RBP26.51■■□□□ 1.83
SSB-202ENST00000409333 FYCO1Q9BQS8 1478 aa26.49■■□□□ 1.83
SSB-202ENST00000409333 CASKIN1Q8WXD9 1431 aa26.49■■□□□ 1.83
SSB-202ENST00000409333 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
SSB-202ENST00000409333 HECW1Q76N89 1606 aa26.44■■□□□ 1.82
SSB-202ENST00000409333 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
SSB-202ENST00000409333 PTPRGP23470 1445 aa26.41■■□□□ 1.82
SSB-202ENST00000409333 PLB1Q6P1J6 1458 aa26.41■■□□□ 1.82
SSB-202ENST00000409333 ABCA8O94911 1581 aa26.41■■□□□ 1.82
SSB-202ENST00000409333 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
SSB-202ENST00000409333 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
SSB-202ENST00000409333 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
SSB-202ENST00000409333 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
SSB-202ENST00000409333 APLP2Q06481 763 aa26.33■■□□□ 1.81
SSB-202ENST00000409333 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
SSB-202ENST00000409333 MAP3K1Q13233 1512 aa26.32■■□□□ 1.8
SSB-202ENST00000409333 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
SSB-202ENST00000409333 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
SSB-202ENST00000409333 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
SSB-202ENST00000409333 EPRSP07814 1512 aaKnown RBP26.3■■□□□ 1.8
SSB-202ENST00000409333 CDK13Q14004 1512 aaKnown RBP26.29■■□□□ 1.8
SSB-202ENST00000409333 CCDC18Q5T9S5 1454 aa26.29■■□□□ 1.8
SSB-202ENST00000409333 UACAQ9BZF9 1416 aa26.27■■□□□ 1.8
SSB-202ENST00000409333 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
SSB-202ENST00000409333 ARID3CA6NKF2 412 aa26.25■■□□□ 1.79
SSB-202ENST00000409333 KANK4Q5T7N3 995 aaPredicted RBP26.23■■□□□ 1.79
SSB-202ENST00000409333 ADCY10Q96PN6 1610 aa26.22■■□□□ 1.79
SSB-202ENST00000409333 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
SSB-202ENST00000409333 MAGI3Q5TCQ9 1506 aa26.19■■□□□ 1.78
SSB-202ENST00000409333 UHRF1BP1LA0JNW5 1464 aa26.19■■□□□ 1.78
SSB-202ENST00000409333 ATP10BO94823 1461 aa26.16■■□□□ 1.78
SSB-202ENST00000409333 ZCCHC11Q5TAX3 1644 aaKnown RBP26.16■■□□□ 1.78
SSB-202ENST00000409333 EHBP1L1Q8N3D4 1523 aa26.13■■□□□ 1.77
SSB-202ENST00000409333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
SSB-202ENST00000409333 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
SSB-202ENST00000409333 MTUS2Q5JR59 1369 aa26.1■■□□□ 1.77
SSB-202ENST00000409333 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
SSB-202ENST00000409333 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.77
SSB-202ENST00000409333 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
SSB-202ENST00000409333 KIF14Q15058 1648 aa26.01■■□□□ 1.75
SSB-202ENST00000409333 CDK11AQ9UQ88 783 aaPredicted RBP26.01■■□□□ 1.75
SSB-202ENST00000409333 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
SSB-202ENST00000409333 NCOA2Q15596 1464 aa25.98■■□□□ 1.75
SSB-202ENST00000409333 PLEKHD1A6NEE1 506 aa25.95■■□□□ 1.74
SSB-202ENST00000409333 PHLDB1Q86UU1 1377 aa25.94■■□□□ 1.74
SSB-202ENST00000409333 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
SSB-202ENST00000409333 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
SSB-202ENST00000409333 CDC42BPAQ5VT25 1732 aa25.87■■□□□ 1.73
SSB-202ENST00000409333 NPM1P06748 294 aaKnown RBP eCLIP25.86■■□□□ 1.73
SSB-202ENST00000409333 ASXL2Q76L83 1435 aa25.86■■□□□ 1.73
SSB-202ENST00000409333 ITSN2Q9NZM3 1697 aa25.85■■□□□ 1.73
SSB-202ENST00000409333 TTC37Q6PGP7 1564 aa25.84■■□□□ 1.73
SSB-202ENST00000409333 ABCC10Q5T3U5 1492 aa25.84■■□□□ 1.73
SSB-202ENST00000409333 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
SSB-202ENST00000409333 RRBP1Q9P2E9 1410 aaKnown RBP25.83■■□□□ 1.73
SSB-202ENST00000409333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.82■■□□□ 1.72
SSB-202ENST00000409333 MAPKBP1O60336 1514 aa25.81■■□□□ 1.72
SSB-202ENST00000409333 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
SSB-202ENST00000409333 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
SSB-202ENST00000409333 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
SSB-202ENST00000409333 FGD6Q6ZV73 1430 aa25.79■■□□□ 1.72
SSB-202ENST00000409333 KCNH8Q96L42 1107 aa25.78■■□□□ 1.72
SSB-202ENST00000409333 CCNB3Q8WWL7 1395 aa25.78■■□□□ 1.72
SSB-202ENST00000409333 CDC42BPBQ9Y5S2 1711 aa25.78■■□□□ 1.72
SSB-202ENST00000409333 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
SSB-202ENST00000409333 GPATCH8Q9UKJ3 1502 aaKnown RBP25.76■■□□□ 1.71
SSB-202ENST00000409333 PTPN23Q9H3S7 1636 aa25.76■■□□□ 1.71
SSB-202ENST00000409333 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
SSB-202ENST00000409333 MIA2Q96PC5 1412 aa25.7■■□□□ 1.7
SSB-202ENST00000409333 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
SSB-202ENST00000409333 FAM50AQ14320 339 aaKnown RBP25.65■■□□□ 1.7
SSB-202ENST00000409333 DIP2BQ9P265 1576 aa25.63■■□□□ 1.69
SSB-202ENST00000409333 ARHGAP5Q13017 1502 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms