RNA–Protein interactions for RNA: ENST00000409321.5

PTMA-203, Transcript of prothymosin alpha, humanhuman

TSL 3 BASIC

Gene PTMA, Length 735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-203ENST00000409321 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
PTMA-203ENST00000409321 KIF21BO75037 1637 aa17.14■□□□□ 0.33
PTMA-203ENST00000409321 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
PTMA-203ENST00000409321 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
PTMA-203ENST00000409321 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
PTMA-203ENST00000409321 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
PTMA-203ENST00000409321 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
PTMA-203ENST00000409321 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
PTMA-203ENST00000409321 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
PTMA-203ENST00000409321 IQGAP2Q13576 1575 aa17.01■□□□□ 0.31
PTMA-203ENST00000409321 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
PTMA-203ENST00000409321 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
PTMA-203ENST00000409321 MSH5O43196 834 aa16.97■□□□□ 0.31
PTMA-203ENST00000409321 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.31
PTMA-203ENST00000409321 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.3
PTMA-203ENST00000409321 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
PTMA-203ENST00000409321 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
PTMA-203ENST00000409321 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
PTMA-203ENST00000409321 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
PTMA-203ENST00000409321 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
PTMA-203ENST00000409321 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
PTMA-203ENST00000409321 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
PTMA-203ENST00000409321 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
PTMA-203ENST00000409321 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
PTMA-203ENST00000409321 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
PTMA-203ENST00000409321 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
PTMA-203ENST00000409321 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
PTMA-203ENST00000409321 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
PTMA-203ENST00000409321 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
PTMA-203ENST00000409321 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
PTMA-203ENST00000409321 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
PTMA-203ENST00000409321 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
PTMA-203ENST00000409321 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
PTMA-203ENST00000409321 PTPRGP23470 1445 aa16.79■□□□□ 0.28
PTMA-203ENST00000409321 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
PTMA-203ENST00000409321 CLIP1P30622 1438 aa16.77■□□□□ 0.27
PTMA-203ENST00000409321 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PTMA-203ENST00000409321 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
PTMA-203ENST00000409321 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
PTMA-203ENST00000409321 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
PTMA-203ENST00000409321 ABCA8O94911 1581 aa16.68■□□□□ 0.26
PTMA-203ENST00000409321 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
PTMA-203ENST00000409321 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
PTMA-203ENST00000409321 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
PTMA-203ENST00000409321 ADCY10Q96PN6 1610 aa16.66■□□□□ 0.26
PTMA-203ENST00000409321 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
PTMA-203ENST00000409321 ABCC2Q92887 1545 aa16.64■□□□□ 0.25
PTMA-203ENST00000409321 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
PTMA-203ENST00000409321 ADRA2BP18089 450 aa16.6■□□□□ 0.25
PTMA-203ENST00000409321 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
PTMA-203ENST00000409321 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
PTMA-203ENST00000409321 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
PTMA-203ENST00000409321 ATP10BO94823 1461 aa16.56■□□□□ 0.24
PTMA-203ENST00000409321 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.243e-14■□□□□ 9
PTMA-203ENST00000409321 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
PTMA-203ENST00000409321 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
PTMA-203ENST00000409321 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
PTMA-203ENST00000409321 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
PTMA-203ENST00000409321 ARID3CA6NKF2 412 aa16.52■□□□□ 0.24
PTMA-203ENST00000409321 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
PTMA-203ENST00000409321 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
PTMA-203ENST00000409321 ATP1B4Q9UN42 357 aaPredicted RBP16.5■□□□□ 0.23
PTMA-203ENST00000409321 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
PTMA-203ENST00000409321 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
PTMA-203ENST00000409321 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
PTMA-203ENST00000409321 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
PTMA-203ENST00000409321 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
PTMA-203ENST00000409321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
PTMA-203ENST00000409321 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
PTMA-203ENST00000409321 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
PTMA-203ENST00000409321 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
PTMA-203ENST00000409321 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
PTMA-203ENST00000409321 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
PTMA-203ENST00000409321 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
PTMA-203ENST00000409321 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
PTMA-203ENST00000409321 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
PTMA-203ENST00000409321 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
PTMA-203ENST00000409321 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
PTMA-203ENST00000409321 DIP2BQ9P265 1576 aa16.35■□□□□ 0.21
PTMA-203ENST00000409321 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
PTMA-203ENST00000409321 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
PTMA-203ENST00000409321 GLI2P10070 1586 aa16.34■□□□□ 0.21
PTMA-203ENST00000409321 KIF13AQ9H1H9 1805 aa16.34■□□□□ 0.21
PTMA-203ENST00000409321 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
PTMA-203ENST00000409321 LRRC9Q6ZRR7 1453 aa16.31■□□□□ 0.2
PTMA-203ENST00000409321 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
PTMA-203ENST00000409321 APLP2Q06481 763 aa16.31■□□□□ 0.2
PTMA-203ENST00000409321 MTUS2Q5JR59 1369 aa16.3■□□□□ 0.2
PTMA-203ENST00000409321 KIF14Q15058 1648 aa16.28■□□□□ 0.2
PTMA-203ENST00000409321 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
PTMA-203ENST00000409321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.25e-9■■■■□ 20.9
PTMA-203ENST00000409321 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.2
PTMA-203ENST00000409321 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
PTMA-203ENST00000409321 CD109Q6YHK3 1445 aa16.25■□□□□ 0.19
PTMA-203ENST00000409321 TTC37Q6PGP7 1564 aa16.24■□□□□ 0.19
PTMA-203ENST00000409321 PPRC1Q5VV67 1664 aaKnown RBP16.21■□□□□ 0.19
PTMA-203ENST00000409321 PLCH2O75038 1416 aa16.21■□□□□ 0.19
PTMA-203ENST00000409321 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
PTMA-203ENST00000409321 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
PTMA-203ENST00000409321 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms