RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
LSM5-202ENST00000409292 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
LSM5-202ENST00000409292 MAGI1Q96QZ7 1491 aaPredicted RBP14.03□□□□□ -0.16
LSM5-202ENST00000409292 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
LSM5-202ENST00000409292 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
LSM5-202ENST00000409292 SYNJ2O15056 1496 aa13.98□□□□□ -0.17
LSM5-202ENST00000409292 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
LSM5-202ENST00000409292 CUX1P39880 1505 aa13.93□□□□□ -0.18
LSM5-202ENST00000409292 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
LSM5-202ENST00000409292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
LSM5-202ENST00000409292 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
LSM5-202ENST00000409292 APLP2Q06481 763 aa13.88□□□□□ -0.19
LSM5-202ENST00000409292 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
LSM5-202ENST00000409292 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
LSM5-202ENST00000409292 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
LSM5-202ENST00000409292 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
LSM5-202ENST00000409292 CAPN15O75808 1086 aa13.83□□□□□ -0.2
LSM5-202ENST00000409292 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
LSM5-202ENST00000409292 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
LSM5-202ENST00000409292 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
LSM5-202ENST00000409292 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
LSM5-202ENST00000409292 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
LSM5-202ENST00000409292 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
LSM5-202ENST00000409292 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
LSM5-202ENST00000409292 NUP160Q12769 1436 aa13.73□□□□□ -0.21
LSM5-202ENST00000409292 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
LSM5-202ENST00000409292 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
LSM5-202ENST00000409292 CEP170Q5SW79 1584 aa13.71□□□□□ -0.21
LSM5-202ENST00000409292 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
LSM5-202ENST00000409292 DSG3P32926 999 aa13.7□□□□□ -0.22
LSM5-202ENST00000409292 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
LSM5-202ENST00000409292 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
LSM5-202ENST00000409292 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
LSM5-202ENST00000409292 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
LSM5-202ENST00000409292 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
LSM5-202ENST00000409292 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
LSM5-202ENST00000409292 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
LSM5-202ENST00000409292 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
LSM5-202ENST00000409292 FAM69CQ0P6D2 419 aa13.62□□□□□ -0.23
LSM5-202ENST00000409292 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
LSM5-202ENST00000409292 KIF13AQ9H1H9 1805 aa13.54□□□□□ -0.24
LSM5-202ENST00000409292 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
LSM5-202ENST00000409292 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
LSM5-202ENST00000409292 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
LSM5-202ENST00000409292 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
LSM5-202ENST00000409292 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
LSM5-202ENST00000409292 CUL7Q14999 1698 aa13.48□□□□□ -0.25
LSM5-202ENST00000409292 PTPRGP23470 1445 aa13.47□□□□□ -0.25
LSM5-202ENST00000409292 ABCB7O75027 752 aa13.47□□□□□ -0.25
LSM5-202ENST00000409292 IGF1RP08069 1367 aa13.46□□□□□ -0.25
LSM5-202ENST00000409292 DIP2BQ9P265 1576 aa13.46□□□□□ -0.25
LSM5-202ENST00000409292 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
LSM5-202ENST00000409292 KDM6BO15054 1643 aa13.46□□□□□ -0.26
LSM5-202ENST00000409292 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
LSM5-202ENST00000409292 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
LSM5-202ENST00000409292 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
LSM5-202ENST00000409292 PLB1Q6P1J6 1458 aa13.4□□□□□ -0.26
LSM5-202ENST00000409292 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
LSM5-202ENST00000409292 ZBTB22O15209 634 aa13.39□□□□□ -0.27
LSM5-202ENST00000409292 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
LSM5-202ENST00000409292 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
LSM5-202ENST00000409292 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
LSM5-202ENST00000409292 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
LSM5-202ENST00000409292 IQGAP2Q13576 1575 aa13.35□□□□□ -0.27
LSM5-202ENST00000409292 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
LSM5-202ENST00000409292 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
LSM5-202ENST00000409292 GLI2P10070 1586 aa13.32□□□□□ -0.28
LSM5-202ENST00000409292 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
LSM5-202ENST00000409292 POLA2Q14181 598 aa13.3□□□□□ -0.28
LSM5-202ENST00000409292 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
LSM5-202ENST00000409292 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
LSM5-202ENST00000409292 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
LSM5-202ENST00000409292 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
LSM5-202ENST00000409292 KDM5BQ9UGL1 1544 aa13.24□□□□□ -0.29
LSM5-202ENST00000409292 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
LSM5-202ENST00000409292 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
LSM5-202ENST00000409292 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
LSM5-202ENST00000409292 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
LSM5-202ENST00000409292 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
LSM5-202ENST00000409292 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
LSM5-202ENST00000409292 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
LSM5-202ENST00000409292 ZCCHC11Q5TAX3 1644 aaKnown RBP13.19□□□□□ -0.3
LSM5-202ENST00000409292 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
LSM5-202ENST00000409292 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
LSM5-202ENST00000409292 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
LSM5-202ENST00000409292 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
LSM5-202ENST00000409292 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
LSM5-202ENST00000409292 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
LSM5-202ENST00000409292 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
LSM5-202ENST00000409292 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
LSM5-202ENST00000409292 CTTNBP2Q8WZ74 1663 aa13.12□□□□□ -0.31
LSM5-202ENST00000409292 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
LSM5-202ENST00000409292 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
LSM5-202ENST00000409292 HECW2Q9P2P5 1572 aa13.08□□□□□ -0.32
LSM5-202ENST00000409292 ABCA8O94911 1581 aa13.07□□□□□ -0.32
LSM5-202ENST00000409292 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
LSM5-202ENST00000409292 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
LSM5-202ENST00000409292 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
LSM5-202ENST00000409292 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
LSM5-202ENST00000409292 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms