RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 KIAA0586Q9BVV6 1533 aa24.87■■□□□ 1.57
SNRNP27-202ENST00000409116 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
SNRNP27-202ENST00000409116 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
SNRNP27-202ENST00000409116 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
SNRNP27-202ENST00000409116 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
SNRNP27-202ENST00000409116 SHROOM2Q13796 1616 aa24.78■■□□□ 1.56
SNRNP27-202ENST00000409116 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
SNRNP27-202ENST00000409116 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
SNRNP27-202ENST00000409116 ARHGEF11O15085 1522 aa24.73■■□□□ 1.55
SNRNP27-202ENST00000409116 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
SNRNP27-202ENST00000409116 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
SNRNP27-202ENST00000409116 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
SNRNP27-202ENST00000409116 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
SNRNP27-202ENST00000409116 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
SNRNP27-202ENST00000409116 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
SNRNP27-202ENST00000409116 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
SNRNP27-202ENST00000409116 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
SNRNP27-202ENST00000409116 DISP1Q96F81 1524 aa24.62■■□□□ 1.53
SNRNP27-202ENST00000409116 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
SNRNP27-202ENST00000409116 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
SNRNP27-202ENST00000409116 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
SNRNP27-202ENST00000409116 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
SNRNP27-202ENST00000409116 SAMD9Q5K651 1589 aa24.53■■□□□ 1.52
SNRNP27-202ENST00000409116 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
SNRNP27-202ENST00000409116 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
SNRNP27-202ENST00000409116 CYB5RLQ6IPT4 315 aa24.49■■□□□ 1.51
SNRNP27-202ENST00000409116 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
SNRNP27-202ENST00000409116 PTPRGP23470 1445 aa24.45■■□□□ 1.5
SNRNP27-202ENST00000409116 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.5
SNRNP27-202ENST00000409116 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
SNRNP27-202ENST00000409116 CLIP1P30622 1438 aa24.43■■□□□ 1.5
SNRNP27-202ENST00000409116 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
SNRNP27-202ENST00000409116 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
SNRNP27-202ENST00000409116 UACAQ9BZF9 1416 aa24.3■■□□□ 1.48
SNRNP27-202ENST00000409116 ADCY10Q96PN6 1610 aa24.3■■□□□ 1.48
SNRNP27-202ENST00000409116 ABCA8O94911 1581 aa24.27■■□□□ 1.48
SNRNP27-202ENST00000409116 ABCC2Q92887 1545 aa24.26■■□□□ 1.47
SNRNP27-202ENST00000409116 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
SNRNP27-202ENST00000409116 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
SNRNP27-202ENST00000409116 RAPGEF6Q8TEU7 1601 aa24.21■■□□□ 1.47
SNRNP27-202ENST00000409116 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
SNRNP27-202ENST00000409116 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
SNRNP27-202ENST00000409116 NUP153P49790 1475 aaKnown RBP24.16■■□□□ 1.46
SNRNP27-202ENST00000409116 KDM5BQ9UGL1 1544 aa24.14■■□□□ 1.45
SNRNP27-202ENST00000409116 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
SNRNP27-202ENST00000409116 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.459e-7■■■■■ 49.4
SNRNP27-202ENST00000409116 ZCCHC11Q5TAX3 1644 aaKnown RBP24.11■■□□□ 1.45
SNRNP27-202ENST00000409116 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
SNRNP27-202ENST00000409116 HECW1Q76N89 1606 aa24.1■■□□□ 1.45
SNRNP27-202ENST00000409116 ATP10BO94823 1461 aa24.09■■□□□ 1.45
SNRNP27-202ENST00000409116 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.45
SNRNP27-202ENST00000409116 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
SNRNP27-202ENST00000409116 CDK13Q14004 1512 aaKnown RBP24.06■■□□□ 1.44
SNRNP27-202ENST00000409116 EPRSP07814 1512 aaKnown RBP24.03■■□□□ 1.44
SNRNP27-202ENST00000409116 MAPKBP1O60336 1514 aa24.02■■□□□ 1.44
SNRNP27-202ENST00000409116 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
SNRNP27-202ENST00000409116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
SNRNP27-202ENST00000409116 HNRNPUL2Q1KMD3 747 aaKnown RBP24.02■■□□□ 1.44
SNRNP27-202ENST00000409116 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
SNRNP27-202ENST00000409116 CCDC18Q5T9S5 1454 aa23.96■■□□□ 1.43
SNRNP27-202ENST00000409116 WDR7Q9Y4E6 1490 aa23.95■■□□□ 1.42
SNRNP27-202ENST00000409116 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
SNRNP27-202ENST00000409116 DIP2BQ9P265 1576 aa23.88■■□□□ 1.41
SNRNP27-202ENST00000409116 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
SNRNP27-202ENST00000409116 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
SNRNP27-202ENST00000409116 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
SNRNP27-202ENST00000409116 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
SNRNP27-202ENST00000409116 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
SNRNP27-202ENST00000409116 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
SNRNP27-202ENST00000409116 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
SNRNP27-202ENST00000409116 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.4
SNRNP27-202ENST00000409116 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
SNRNP27-202ENST00000409116 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
SNRNP27-202ENST00000409116 MAP3K1Q13233 1512 aa23.78■■□□□ 1.4
SNRNP27-202ENST00000409116 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
SNRNP27-202ENST00000409116 GLI2P10070 1586 aa23.77■■□□□ 1.4
SNRNP27-202ENST00000409116 APLP2Q06481 763 aa23.77■■□□□ 1.4
SNRNP27-202ENST00000409116 KIF14Q15058 1648 aa23.77■■□□□ 1.4
SNRNP27-202ENST00000409116 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
SNRNP27-202ENST00000409116 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
SNRNP27-202ENST00000409116 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
SNRNP27-202ENST00000409116 TTC37Q6PGP7 1564 aa23.72■■□□□ 1.39
SNRNP27-202ENST00000409116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.72■■□□□ 1.39
SNRNP27-202ENST00000409116 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
SNRNP27-202ENST00000409116 MAP3K4Q9Y6R4 1608 aa23.71■■□□□ 1.39
SNRNP27-202ENST00000409116 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
SNRNP27-202ENST00000409116 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
SNRNP27-202ENST00000409116 PPRC1Q5VV67 1664 aaKnown RBP23.62■■□□□ 1.37
SNRNP27-202ENST00000409116 SUPT6HQ7KZ85 1726 aaKnown RBP23.62■■□□□ 1.37
SNRNP27-202ENST00000409116 NCOA2Q15596 1464 aa23.61■■□□□ 1.37
SNRNP27-202ENST00000409116 PPARGC1BQ86YN6 1023 aaKnown RBP23.61■■□□□ 1.37
SNRNP27-202ENST00000409116 MYO5CQ9NQX4 1742 aa23.58■■□□□ 1.36
SNRNP27-202ENST00000409116 CCNB3Q8WWL7 1395 aa23.57■■□□□ 1.36
SNRNP27-202ENST00000409116 PLCH2O75038 1416 aa23.56■■□□□ 1.36
SNRNP27-202ENST00000409116 CDC42BPAQ5VT25 1732 aa23.55■■□□□ 1.36
SNRNP27-202ENST00000409116 GPATCH8Q9UKJ3 1502 aaKnown RBP23.55■■□□□ 1.36
SNRNP27-202ENST00000409116 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
SNRNP27-202ENST00000409116 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
SNRNP27-202ENST00000409116 ARHGAP5Q13017 1502 aa23.52■■□□□ 1.36
SNRNP27-202ENST00000409116 FANCAO15360 1455 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms