RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.451e-11■■■■■ 65.8
SNRNP27-202ENST00000409116 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.013e-9■■■□□ 17.4
SNRNP27-202ENST00000409116 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.264e-9■□□□□ 10.2
SNRNP27-202ENST00000409116 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.21□□□□□ -0.136e-9■□□□□ 10.9
SNRNP27-202ENST00000409116 NCBP2P52298 156 aaKnown RBP eCLIP14.12□□□□□ -0.157e-9■□□□□ 10
SNRNP27-202ENST00000409116 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.78e-9■□□□□ 8.7
SNRNP27-202ENST00000409116 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■□□□ 13.2
SNRNP27-202ENST00000409116 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.351e-7■■□□□ 13
SNRNP27-202ENST00000409116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■■□ 21.7
SNRNP27-202ENST00000409116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.87■□□□□ 0.133e-7■■■■■ 96.8
SNRNP27-202ENST00000409116 TIA1P31483 386 aaKnown RBP eCLIP14.27□□□□□ -0.123e-7■■■■□ 26.2
SNRNP27-202ENST00000409116 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.533e-7■□□□□ 10.9
SNRNP27-202ENST00000409116 SUB1P53999 127 aaKnown RBP eCLIP11.71□□□□□ -0.535e-7■■■■■ 30.2
SNRNP27-202ENST00000409116 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.145e-7■□□□□ 9.8
SNRNP27-202ENST00000409116 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.636e-7■■■□□ 15.4
SNRNP27-202ENST00000409116 KHSRPQ92945 711 aaKnown RBP eCLIP15.85■□□□□ 0.139e-7■■■■□ 21.4
SNRNP27-202ENST00000409116 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.459e-7■■■■■ 49.4
SNRNP27-202ENST00000409116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.811e-6■■■□□ 14.8
SNRNP27-202ENST00000409116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■□□ 16.5
SNRNP27-202ENST00000409116 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.422e-6■■□□□ 11.4
SNRNP27-202ENST00000409116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■■ 41.9
SNRNP27-202ENST00000409116 MATR3P43243 847 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■□□□ 12.9
SNRNP27-202ENST00000409116 PCBP2Q15366 365 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■■■□□ 14.6
SNRNP27-202ENST00000409116 RBFOX2O43251 390 aaKnown RBP eCLIP12.02□□□□□ -0.494e-6■■■■□ 21.2
SNRNP27-202ENST00000409116 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.27e-6■■■■■ 28.7
Retrieved 25 of 25 RNA–protein pairs in 7.2 ms