RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 GSE1Q14687 1217 aa6.64□□□□□ -1.35
CUL3-203ENST00000409096 FAM212AQ96EL1 285 aa6.63□□□□□ -1.35
CUL3-203ENST00000409096 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CUL3-203ENST00000409096 PYGBP11216 843 aa6.61□□□□□ -1.35
CUL3-203ENST00000409096 TRIM41Q8WV44 630 aa6.61□□□□□ -1.35
CUL3-203ENST00000409096 KDM2AQ9Y2K7 1162 aa6.59□□□□□ -1.35
CUL3-203ENST00000409096 HS6ST3Q8IZP7 471 aa6.59□□□□□ -1.35
CUL3-203ENST00000409096 RIOK3O14730 519 aaKnown RBP6.58□□□□□ -1.36
CUL3-203ENST00000409096 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
CUL3-203ENST00000409096 TSPYL2Q9H2G4 693 aaPredicted RBP6.58□□□□□ -1.36
CUL3-203ENST00000409096 TSHZ2Q9NRE2 1034 aa6.57□□□□□ -1.36
CUL3-203ENST00000409096 FARP1Q9Y4F1 1045 aaPredicted RBP6.57□□□□□ -1.36
CUL3-203ENST00000409096 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
CUL3-203ENST00000409096 SPRYD3Q8NCJ5 442 aa6.57□□□□□ -1.36
CUL3-203ENST00000409096 STK25O00506 426 aa6.55□□□□□ -1.36
CUL3-203ENST00000409096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.54□□□□□ -1.36
CUL3-203ENST00000409096 FXR2P51116 673 aaKnown RBP eCLIP6.54□□□□□ -1.362e-7■■□□□ 13.2
CUL3-203ENST00000409096 ZFP91Q96JP5 570 aaPredicted RBP6.54□□□□□ -1.36
CUL3-203ENST00000409096 CHRM1P11229 460 aaPredicted RBP6.53□□□□□ -1.36
CUL3-203ENST00000409096 CHRDL2Q6WN34 429 aa6.53□□□□□ -1.36
CUL3-203ENST00000409096 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
CUL3-203ENST00000409096 BCL11BQ9C0K0 894 aaPredicted RBP6.52□□□□□ -1.37
CUL3-203ENST00000409096 VGFO15240 615 aaPredicted RBP6.52□□□□□ -1.37
CUL3-203ENST00000409096 PIP4P2Q8N4L2 257 aa6.51□□□□□ -1.37
CUL3-203ENST00000409096 STK24Q9Y6E0 443 aa6.51□□□□□ -1.37
CUL3-203ENST00000409096 PCDHB8Q9UN66 801 aa6.5□□□□□ -1.37
CUL3-203ENST00000409096 PCDHB13Q9Y5F0 798 aa6.5□□□□□ -1.37
CUL3-203ENST00000409096 CCDC61Q9Y6R9 512 aa6.5□□□□□ -1.37
CUL3-203ENST00000409096 GTPBP6O43824 516 aaPredicted RBP6.49□□□□□ -1.37
CUL3-203ENST00000409096 DNAJC5Q9H3Z4 198 aa6.49□□□□□ -1.37
CUL3-203ENST00000409096 TAOK2Q9UL54 1235 aa6.46□□□□□ -1.38
CUL3-203ENST00000409096 SGIP1Q9BQI5 828 aa6.45□□□□□ -1.38
CUL3-203ENST00000409096 MAP3K13O43283 966 aa6.43□□□□□ -1.38
CUL3-203ENST00000409096 IFNL1Q8IU54 200 aa6.43□□□□□ -1.38
CUL3-203ENST00000409096 ZNF467Q7Z7K2 595 aaPredicted RBP6.43□□□□□ -1.38
CUL3-203ENST00000409096 BCANQ96GW7 911 aa6.42□□□□□ -1.38
CUL3-203ENST00000409096 PDAP1Q13442 181 aaKnown RBP6.41□□□□□ -1.38
CUL3-203ENST00000409096 PRKCSHP14314 528 aaPredicted RBP6.41□□□□□ -1.38
CUL3-203ENST00000409096 KIF12Q96FN5 646 aa6.41□□□□□ -1.38
CUL3-203ENST00000409096 PSEN1P49768 467 aa6.4□□□□□ -1.38
CUL3-203ENST00000409096 PHF12Q96QT6 1004 aa6.4□□□□□ -1.38
CUL3-203ENST00000409096 CD44P16070 742 aaKnown RBP6.39□□□□□ -1.39
CUL3-203ENST00000409096 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
CUL3-203ENST00000409096 ZNF579Q8NAF0 562 aaKnown RBP6.39□□□□□ -1.39
CUL3-203ENST00000409096 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
CUL3-203ENST00000409096 MFRPQ9BY79 579 aa6.38□□□□□ -1.39
CUL3-203ENST00000409096 TRPC6Q9Y210 931 aa6.37□□□□□ -1.39
CUL3-203ENST00000409096 CADPS2Q86UW7 1296 aa6.36□□□□□ -1.39
CUL3-203ENST00000409096 EFCAB3Q8N7B9 438 aa6.35□□□□□ -1.39
CUL3-203ENST00000409096 CABP2Q9NPB3 220 aa6.35□□□□□ -1.39
CUL3-203ENST00000409096 PPP1R37O75864 691 aa6.34□□□□□ -1.39
CUL3-203ENST00000409096 PHF8Q9UPP1 1060 aa6.33□□□□□ -1.4
CUL3-203ENST00000409096 MS4A3Q96HJ5 214 aa6.32□□□□□ -1.4
CUL3-203ENST00000409096 FBXO22Q8NEZ5 403 aa6.31□□□□□ -1.4
CUL3-203ENST00000409096 RYDENQ9NUL5 291 aaKnown RBP6.31□□□□□ -1.4
CUL3-203ENST00000409096 C19orf67A6NJJ6 358 aa6.3□□□□□ -1.4
CUL3-203ENST00000409096 TPRNQ4KMQ1 711 aa6.3□□□□□ -1.4
CUL3-203ENST00000409096 EVX2Q03828 476 aa6.29□□□□□ -1.4
CUL3-203ENST00000409096 MS4A4AQ96JQ5 239 aa6.28□□□□□ -1.4
CUL3-203ENST00000409096 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
CUL3-203ENST00000409096 NBR1Q14596 966 aa6.27□□□□□ -1.41
CUL3-203ENST00000409096 GALR2O43603 387 aaPredicted RBP6.26□□□□□ -1.41
CUL3-203ENST00000409096 KCNV2Q8TDN2 545 aa6.25□□□□□ -1.41
CUL3-203ENST00000409096 NLRP6P59044 892 aa6.25□□□□□ -1.41
CUL3-203ENST00000409096 SOX12O15370 315 aa6.24□□□□□ -1.41
CUL3-203ENST00000409096 TTLL13PA6NNM8 815 aa6.23□□□□□ -1.41
CUL3-203ENST00000409096 HAX1O00165 279 aa6.23□□□□□ -1.41
CUL3-203ENST00000409096 BMP2KQ9NSY1 1161 aaPredicted RBP6.22□□□□□ -1.41
CUL3-203ENST00000409096 NCKAP5LQ9HCH0 1330 aa6.21□□□□□ -1.41
CUL3-203ENST00000409096 GOLGA2Q08379 1002 aa6.21□□□□□ -1.42
CUL3-203ENST00000409096 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
CUL3-203ENST00000409096 TRIM35Q9UPQ4 493 aa6.19□□□□□ -1.42
CUL3-203ENST00000409096 TIE1P35590 1138 aa6.19□□□□□ -1.42
CUL3-203ENST00000409096 MKRN3Q13064 507 aaKnown RBP6.19□□□□□ -1.42
CUL3-203ENST00000409096 DPY19L2Q6NUT2 758 aa6.19□□□□□ -1.42
CUL3-203ENST00000409096 P3H3Q8IVL6 736 aa6.17□□□□□ -1.42
CUL3-203ENST00000409096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.17□□□□□ -1.422e-7■■■□□ 15.6
CUL3-203ENST00000409096 ATN1P54259 1190 aaPredicted RBP6.16□□□□□ -1.42
CUL3-203ENST00000409096 LARP6Q9BRS8 491 aaKnown RBP6.16□□□□□ -1.42
CUL3-203ENST00000409096 ILDR1Q86SU0 546 aaPredicted RBP6.15□□□□□ -1.42
CUL3-203ENST00000409096 CRISPLD2Q9H0B8 497 aa6.15□□□□□ -1.43
CUL3-203ENST00000409096 E2F4Q16254 413 aa6.14□□□□□ -1.43
CUL3-203ENST00000409096 PDCD7Q8N8D1 485 aaKnown RBP6.13□□□□□ -1.43
CUL3-203ENST00000409096 SEMA3EO15041 775 aa6.12□□□□□ -1.43
CUL3-203ENST00000409096 ATMINO43313 823 aaPredicted RBP6.12□□□□□ -1.43
CUL3-203ENST00000409096 DDX27Q96GQ7 796 aaKnown RBP6.11□□□□□ -1.43
CUL3-203ENST00000409096 MFSD10Q14728 455 aa6.11□□□□□ -1.43
CUL3-203ENST00000409096 PDE4AP27815 886 aa6.1□□□□□ -1.43
CUL3-203ENST00000409096 ASTLQ6HA08 431 aaPredicted RBP6.1□□□□□ -1.43
CUL3-203ENST00000409096 MICALL2Q8IY33 904 aa6.1□□□□□ -1.43
CUL3-203ENST00000409096 ARHGEF1Q92888 912 aaKnown RBP6.1□□□□□ -1.43
CUL3-203ENST00000409096 GABBR2O75899 941 aa6.09□□□□□ -1.43
CUL3-203ENST00000409096 IRX5P78411 483 aaPredicted RBP6.09□□□□□ -1.43
CUL3-203ENST00000409096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.09□□□□□ -1.43
CUL3-203ENST00000409096 PELP1Q8IZL8 1130 aaKnown RBP6.09□□□□□ -1.43
CUL3-203ENST00000409096 LMOD2Q6P5Q4 547 aa6.09□□□□□ -1.43
CUL3-203ENST00000409096 DSG2Q14126 1118 aa6.07□□□□□ -1.44
CUL3-203ENST00000409096 COLQQ9Y215 455 aaPredicted RBP6.07□□□□□ -1.44
CUL3-203ENST00000409096 PPP1R15BQ5SWA1 713 aa6.06□□□□□ -1.44
CUL3-203ENST00000409096 GPHNQ9NQX3 736 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms