RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
CUL3-203ENST00000409096 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
CUL3-203ENST00000409096 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
CUL3-203ENST00000409096 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
CUL3-203ENST00000409096 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
CUL3-203ENST00000409096 FOXD1Q16676 465 aa9.66□□□□□ -0.86
CUL3-203ENST00000409096 PPP6R1Q9UPN7 881 aa9.54□□□□□ -0.88
CUL3-203ENST00000409096 ADRA2BP18089 450 aa9.53□□□□□ -0.88
CUL3-203ENST00000409096 PIAS4Q8N2W9 510 aaPredicted RBP9.14□□□□□ -0.95
CUL3-203ENST00000409096 KCNA4P22459 653 aa9.03□□□□□ -0.96
CUL3-203ENST00000409096 PPP4R3CPQ6ZMV5 832 aa8.89□□□□□ -0.99
CUL3-203ENST00000409096 EHMT2Q96KQ7 1210 aa8.71□□□□□ -1.02
CUL3-203ENST00000409096 MSH5O43196 834 aa8.69□□□□□ -1.02
CUL3-203ENST00000409096 NPM3O75607 178 aaKnown RBP8.63□□□□□ -1.03
CUL3-203ENST00000409096 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
CUL3-203ENST00000409096 MAPK8IP2Q13387 824 aaPredicted RBP8.6□□□□□ -1.03
CUL3-203ENST00000409096 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
CUL3-203ENST00000409096 CNKSR2Q8WXI2 1034 aa8.54□□□□□ -1.04
CUL3-203ENST00000409096 SCAF1Q9H7N4 1312 aaKnown RBP8.53□□□□□ -1.04
CUL3-203ENST00000409096 CSRNP3Q8WYN3 585 aa8.46□□□□□ -1.06
CUL3-203ENST00000409096 ZBTB22O15209 634 aa8.36□□□□□ -1.07
CUL3-203ENST00000409096 RNF216Q9NWF9 866 aaPredicted RBP8.31□□□□□ -1.08
CUL3-203ENST00000409096 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
CUL3-203ENST00000409096 HOXD11P31277 338 aaPredicted RBP8.23□□□□□ -1.09
CUL3-203ENST00000409096 DNAJC5BQ9UF47 199 aa8.21□□□□□ -1.09
CUL3-203ENST00000409096 FOXD4L1Q9NU39 408 aa8.16□□□□□ -1.1
CUL3-203ENST00000409096 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
CUL3-203ENST00000409096 DCAF8L1A6NGE4 600 aa8□□□□□ -1.13
CUL3-203ENST00000409096 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.15
CUL3-203ENST00000409096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.85□□□□□ -1.152e-6■■□□□ 12.1
CUL3-203ENST00000409096 ATF5Q9Y2D1 282 aaPredicted RBP7.8□□□□□ -1.16
CUL3-203ENST00000409096 U3KPZ7 1027 aaPredicted RBP7.8□□□□□ -1.16
CUL3-203ENST00000409096 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
CUL3-203ENST00000409096 SAMD1Q6SPF0 538 aaPredicted RBP7.66□□□□□ -1.18
CUL3-203ENST00000409096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.64□□□□□ -1.19
CUL3-203ENST00000409096 HNRNPUL2Q1KMD3 747 aaKnown RBP7.64□□□□□ -1.19
CUL3-203ENST00000409096 FKBP8Q14318 412 aa7.62□□□□□ -1.19
CUL3-203ENST00000409096 POTEDQ86YR6 584 aa7.59□□□□□ -1.19
CUL3-203ENST00000409096 SPINK5Q9NQ38 1064 aaPredicted RBP7.56□□□□□ -1.2
CUL3-203ENST00000409096 ZNF219Q9P2Y4 722 aaPredicted RBP7.55□□□□□ -1.2
CUL3-203ENST00000409096 RNF39Q9H2S5 420 aa7.54□□□□□ -1.2
CUL3-203ENST00000409096 TRHP20396 242 aaPredicted RBP7.5□□□□□ -1.21
CUL3-203ENST00000409096 CAPN15O75808 1086 aa7.45□□□□□ -1.22
CUL3-203ENST00000409096 APLP2Q06481 763 aa7.45□□□□□ -1.22
CUL3-203ENST00000409096 MKRN4PQ13434 485 aaPredicted RBP7.45□□□□□ -1.22
CUL3-203ENST00000409096 POLA2Q14181 598 aa7.42□□□□□ -1.22
CUL3-203ENST00000409096 RTN4Q9NQC3 1192 aaKnown RBP7.41□□□□□ -1.22
CUL3-203ENST00000409096 C1QBPQ07021 282 aaKnown RBP7.4□□□□□ -1.22
CUL3-203ENST00000409096 ABCB7O75027 752 aa7.39□□□□□ -1.23
CUL3-203ENST00000409096 SPDYE4A6NLX3 237 aa7.33□□□□□ -1.24
CUL3-203ENST00000409096 FBLN2P98095 1184 aa7.29□□□□□ -1.24
CUL3-203ENST00000409096 AMER1Q5JTC6 1135 aaPredicted RBP7.28□□□□□ -1.24
CUL3-203ENST00000409096 DSG3P32926 999 aa7.27□□□□□ -1.25
CUL3-203ENST00000409096 PROM2Q8N271 834 aa7.24□□□□□ -1.25
CUL3-203ENST00000409096 OSCARQ8IYS5 282 aa7.19□□□□□ -1.26
CUL3-203ENST00000409096 ZBTB12Q9Y330 459 aaPredicted RBP7.18□□□□□ -1.26
CUL3-203ENST00000409096 CACNB1Q02641 598 aaPredicted RBP7.16□□□□□ -1.26
CUL3-203ENST00000409096 FBXO3Q9UK99 471 aa7.15□□□□□ -1.26
CUL3-203ENST00000409096 VASPP50552 380 aaPredicted RBP7.14□□□□□ -1.27
CUL3-203ENST00000409096 ZNF692Q9BU19 519 aaPredicted RBP7.12□□□□□ -1.27
CUL3-203ENST00000409096 IFNLR1Q8IU57 520 aaPredicted RBP7.11□□□□□ -1.27
CUL3-203ENST00000409096 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
CUL3-203ENST00000409096 SPDYE2BA6NHP3 402 aa7.07□□□□□ -1.28
CUL3-203ENST00000409096 SPDYE6P0CI01 402 aa7.07□□□□□ -1.28
CUL3-203ENST00000409096 SPDYE2Q495Y8 402 aa7.07□□□□□ -1.28
CUL3-203ENST00000409096 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
CUL3-203ENST00000409096 SLC24A1O60721 1099 aa7.02□□□□□ -1.29
CUL3-203ENST00000409096 PKD2Q13563 968 aa6.96□□□□□ -1.29
CUL3-203ENST00000409096 KLHL34Q8N239 644 aa6.94□□□□□ -1.3
CUL3-203ENST00000409096 PLCD3Q8N3E9 789 aa6.94□□□□□ -1.3
CUL3-203ENST00000409096 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
CUL3-203ENST00000409096 MIER1Q8N108 512 aa6.92□□□□□ -1.3
CUL3-203ENST00000409096 DCAF8L2P0C7V8 631 aa6.89□□□□□ -1.31
CUL3-203ENST00000409096 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
CUL3-203ENST00000409096 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
CUL3-203ENST00000409096 ECM2O94769 699 aaPredicted RBP6.83□□□□□ -1.32
CUL3-203ENST00000409096 AKT1S1Q96B36 256 aa6.82□□□□□ -1.32
CUL3-203ENST00000409096 RBM42Q9BTD8 480 aaKnown RBP6.82□□□□□ -1.32
CUL3-203ENST00000409096 RGL2O15211 777 aa6.81□□□□□ -1.32
CUL3-203ENST00000409096 REM2Q8IYK8 340 aaPredicted RBP6.81□□□□□ -1.32
CUL3-203ENST00000409096 SPDYE1Q8NFV5 336 aaPredicted RBP6.79□□□□□ -1.32
CUL3-203ENST00000409096 CIZ1Q9ULV3 898 aaPredicted RBP6.79□□□□□ -1.32
CUL3-203ENST00000409096 PLCB2Q00722 1185 aa6.78□□□□□ -1.32
CUL3-203ENST00000409096 NPM1P06748 294 aaKnown RBP eCLIP6.78□□□□□ -1.32
CUL3-203ENST00000409096 PLEKHG5O94827 1062 aa6.77□□□□□ -1.33
CUL3-203ENST00000409096 CREBZFQ9NS37 354 aa6.76□□□□□ -1.33
CUL3-203ENST00000409096 PITPNM1O00562 1244 aa6.76□□□□□ -1.33
CUL3-203ENST00000409096 PRR29P0C7W0 189 aa6.76□□□□□ -1.33
CUL3-203ENST00000409096 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
CUL3-203ENST00000409096 ZBTB47Q9UFB7 747 aaPredicted RBP6.75□□□□□ -1.33
CUL3-203ENST00000409096 NUBP1P53384 320 aa6.74□□□□□ -1.33
CUL3-203ENST00000409096 RNF25Q96BH1 459 aaPredicted RBP6.72□□□□□ -1.33
CUL3-203ENST00000409096 HAP1P54257 671 aaPredicted RBP6.7□□□□□ -1.34
CUL3-203ENST00000409096 CHADLQ6NUI6 762 aa6.69□□□□□ -1.34
CUL3-203ENST00000409096 RASEFQ8IZ41 740 aa6.69□□□□□ -1.34
CUL3-203ENST00000409096 CHGAP10645 457 aaKnown RBP6.68□□□□□ -1.34
CUL3-203ENST00000409096 DCAF8Q5TAQ9 597 aa6.68□□□□□ -1.34
CUL3-203ENST00000409096 PAXIP1Q6ZW49 1069 aaPredicted RBP6.65□□□□□ -1.34
CUL3-203ENST00000409096 BBXQ8WY36 941 aaPredicted RBP6.65□□□□□ -1.34
CUL3-203ENST00000409096 CFAP44Q96MT7 982 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms