RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CEP170Q5SW79 1584 aa33■■■□□ 2.87
CHKB-201ENST00000406938 NUP160Q12769 1436 aa32.98■■■□□ 2.87
CHKB-201ENST00000406938 CEP162Q5TB80 1403 aa32.96■■■□□ 2.87
CHKB-201ENST00000406938 KIAA0586Q9BVV6 1533 aa32.9■■■□□ 2.86
CHKB-201ENST00000406938 IQGAP2Q13576 1575 aa32.89■■■□□ 2.86
CHKB-201ENST00000406938 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
CHKB-201ENST00000406938 CLIP1P30622 1438 aa32.85■■■□□ 2.85
CHKB-201ENST00000406938 CLASP1Q7Z460 1538 aa32.73■■■□□ 2.83
CHKB-201ENST00000406938 ARHGAP35Q9NRY4 1499 aa32.72■■■□□ 2.83
CHKB-201ENST00000406938 UGGT2Q9NYU1 1516 aa32.72■■■□□ 2.83
CHKB-201ENST00000406938 EFCAB5A4FU69 1503 aa32.7■■■□□ 2.83
CHKB-201ENST00000406938 SAMD9Q5K651 1589 aa32.68■■■□□ 2.82
CHKB-201ENST00000406938 OSCARQ8IYS5 282 aa32.63■■■□□ 2.81
CHKB-201ENST00000406938 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
CHKB-201ENST00000406938 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
CHKB-201ENST00000406938 SHROOM2Q13796 1616 aa32.61■■■□□ 2.81
CHKB-201ENST00000406938 DISP1Q96F81 1524 aa32.59■■■□□ 2.81
CHKB-201ENST00000406938 KIAA0556O60303 1618 aa32.57■■■□□ 2.8
CHKB-201ENST00000406938 FHOD3Q2V2M9 1422 aa32.57■■■□□ 2.8
CHKB-201ENST00000406938 P3H3Q8IVL6 736 aa32.56■■■□□ 2.8
CHKB-201ENST00000406938 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
CHKB-201ENST00000406938 CARMIL2Q6F5E8 1435 aa32.5■■■□□ 2.79
CHKB-201ENST00000406938 VPS8Q8N3P4 1428 aa32.48■■■□□ 2.79
CHKB-201ENST00000406938 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
CHKB-201ENST00000406938 FMN1Q68DA7 1419 aa32.38■■■□□ 2.77
CHKB-201ENST00000406938 PCF11O94913 1555 aaKnown RBP32.3■■■□□ 2.76
CHKB-201ENST00000406938 TTBK1Q5TCY1 1321 aaPredicted RBP32.29■■■□□ 2.76
CHKB-201ENST00000406938 CASKIN1Q8WXD9 1431 aa32.24■■■□□ 2.75
CHKB-201ENST00000406938 PTPRGP23470 1445 aa32.24■■■□□ 2.75
CHKB-201ENST00000406938 FYCO1Q9BQS8 1478 aa32.24■■■□□ 2.75
CHKB-201ENST00000406938 PLB1Q6P1J6 1458 aa32.18■■■□□ 2.74
CHKB-201ENST00000406938 ARHGEF11O15085 1522 aa32.17■■■□□ 2.74
CHKB-201ENST00000406938 RAPGEF6Q8TEU7 1601 aa32.16■■■□□ 2.74
CHKB-201ENST00000406938 HECW1Q76N89 1606 aa32.14■■■□□ 2.74
CHKB-201ENST00000406938 ABCA8O94911 1581 aa32.13■■■□□ 2.73
CHKB-201ENST00000406938 ATP1B4Q9UN42 357 aaPredicted RBP32.12■■■□□ 2.73
CHKB-201ENST00000406938 NUP153P49790 1475 aaKnown RBP32.07■■■□□ 2.72
CHKB-201ENST00000406938 RIMBP3CA6NJZ7 1639 aa32.06■■■□□ 2.72
CHKB-201ENST00000406938 RIMBP3BA6NNM3 1639 aa32.06■■■□□ 2.72
CHKB-201ENST00000406938 RIMBP3Q9UFD9 1639 aa32.06■■■□□ 2.72
CHKB-201ENST00000406938 UACAQ9BZF9 1416 aa32.05■■■□□ 2.72
CHKB-201ENST00000406938 LRRIQ1Q96JM4 1722 aa32.05■■■□□ 2.72
CHKB-201ENST00000406938 APLP2Q06481 763 aa32.05■■■□□ 2.72
CHKB-201ENST00000406938 TIAM1Q13009 1591 aa32.03■■■□□ 2.72
CHKB-201ENST00000406938 CFAP43Q8NDM7 1665 aa32.02■■■□□ 2.72
CHKB-201ENST00000406938 EPRSP07814 1512 aaKnown RBP32.01■■■□□ 2.72
CHKB-201ENST00000406938 MAP3K1Q13233 1512 aa32.01■■■□□ 2.72
CHKB-201ENST00000406938 ABCC2Q92887 1545 aa32.01■■■□□ 2.71
CHKB-201ENST00000406938 CCDC18Q5T9S5 1454 aa32.01■■■□□ 2.71
CHKB-201ENST00000406938 CDK13Q14004 1512 aaKnown RBP31.97■■■□□ 2.71
CHKB-201ENST00000406938 ARID3CA6NKF2 412 aa31.97■■■□□ 2.71
CHKB-201ENST00000406938 UHRF1BP1LA0JNW5 1464 aa31.95■■■□□ 2.71
CHKB-201ENST00000406938 PPARGC1BQ86YN6 1023 aaKnown RBP31.93■■■□□ 2.7
CHKB-201ENST00000406938 ADCY10Q96PN6 1610 aa31.91■■■□□ 2.7
CHKB-201ENST00000406938 KANK4Q5T7N3 995 aaPredicted RBP31.88■■■□□ 2.69
CHKB-201ENST00000406938 ATP10BO94823 1461 aa31.87■■■□□ 2.69
CHKB-201ENST00000406938 LRRC9Q6ZRR7 1453 aa31.86■■■□□ 2.69
CHKB-201ENST00000406938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.82■■■□□ 2.69
CHKB-201ENST00000406938 HNRNPUL2Q1KMD3 747 aaKnown RBP31.82■■■□□ 2.69
CHKB-201ENST00000406938 MAGI3Q5TCQ9 1506 aa31.82■■■□□ 2.68
CHKB-201ENST00000406938 KDM5BQ9UGL1 1544 aa31.82■■■□□ 2.68
CHKB-201ENST00000406938 CYB5RLQ6IPT4 315 aa31.79■■■□□ 2.68
CHKB-201ENST00000406938 MTUS2Q5JR59 1369 aa31.79■■■□□ 2.68
CHKB-201ENST00000406938 ZCCHC11Q5TAX3 1644 aaKnown RBP31.78■■■□□ 2.68
CHKB-201ENST00000406938 EHBP1L1Q8N3D4 1523 aa31.78■■■□□ 2.68
CHKB-201ENST00000406938 CDK11AQ9UQ88 783 aaPredicted RBP31.74■■■□□ 2.67
CHKB-201ENST00000406938 TROQ12816 1431 aaPredicted RBP31.68■■■□□ 2.66
CHKB-201ENST00000406938 PLEKHD1A6NEE1 506 aa31.65■■■□□ 2.66
CHKB-201ENST00000406938 DNAJC5Q9H3Z4 198 aa31.64■■■□□ 2.65
CHKB-201ENST00000406938 SUPT6HQ7KZ85 1726 aaKnown RBP31.64■■■□□ 2.65
CHKB-201ENST00000406938 NPM1P06748 294 aaKnown RBP eCLIP31.6■■■□□ 2.65
CHKB-201ENST00000406938 NCOA2Q15596 1464 aa31.6■■■□□ 2.65
CHKB-201ENST00000406938 KIF14Q15058 1648 aa31.57■■■□□ 2.64
CHKB-201ENST00000406938 ASXL2Q76L83 1435 aa31.55■■■□□ 2.64
CHKB-201ENST00000406938 WDR7Q9Y4E6 1490 aa31.54■■■□□ 2.64
CHKB-201ENST00000406938 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
CHKB-201ENST00000406938 MAPKBP1O60336 1514 aa31.49■■■□□ 2.63
CHKB-201ENST00000406938 ABCC10Q5T3U5 1492 aa31.45■■■□□ 2.63
CHKB-201ENST00000406938 MYOM3Q5VTT5 1437 aa31.44■■■□□ 2.62
CHKB-201ENST00000406938 KCNH8Q96L42 1107 aa31.43■■■□□ 2.62
CHKB-201ENST00000406938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.42■■■□□ 2.624e-7■■■□□ 18.4
CHKB-201ENST00000406938 TTC37Q6PGP7 1564 aa31.41■■■□□ 2.62
CHKB-201ENST00000406938 CCNB3Q8WWL7 1395 aa31.41■■■□□ 2.62
CHKB-201ENST00000406938 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
CHKB-201ENST00000406938 RRBP1Q9P2E9 1410 aaKnown RBP31.39■■■□□ 2.62
CHKB-201ENST00000406938 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
CHKB-201ENST00000406938 GPATCH8Q9UKJ3 1502 aaKnown RBP31.35■■■□□ 2.61
CHKB-201ENST00000406938 ITSN2Q9NZM3 1697 aa31.35■■■□□ 2.61
CHKB-201ENST00000406938 CDC42BPAQ5VT25 1732 aa31.32■■■□□ 2.6
CHKB-201ENST00000406938 ABCA9Q8IUA7 1624 aa31.3■■■□□ 2.6
CHKB-201ENST00000406938 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
CHKB-201ENST00000406938 PREX2Q70Z35 1606 aa31.29■■■□□ 2.6
CHKB-201ENST00000406938 MYO5CQ9NQX4 1742 aa31.26■■■□□ 2.6
CHKB-201ENST00000406938 PTPN23Q9H3S7 1636 aa31.26■■■□□ 2.59
CHKB-201ENST00000406938 CFDP1Q9UEE9 299 aaPredicted RBP31.24■■■□□ 2.59
CHKB-201ENST00000406938 PCGF6Q9BYE7 350 aa31.22■■■□□ 2.59
CHKB-201ENST00000406938 TCOF1Q13428 1488 aaKnown RBP31.22■■■□□ 2.59
CHKB-201ENST00000406938 DIP2BQ9P265 1576 aa31.22■■■□□ 2.59
CHKB-201ENST00000406938 CDC42BPBQ9Y5S2 1711 aa31.22■■■□□ 2.59
CHKB-201ENST00000406938 PLCH2O75038 1416 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms