RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CLASP1Q7Z460 1538 aa35.9■■■■□ 3.34
EPCAM-202ENST00000405271 GRIN2AQ12879 1464 aa35.87■■■■□ 3.33
EPCAM-202ENST00000405271 CTTNBP2Q8WZ74 1663 aa35.83■■■■□ 3.33
EPCAM-202ENST00000405271 CYB5RLQ6IPT4 315 aa35.81■■■■□ 3.32
EPCAM-202ENST00000405271 NUP160Q12769 1436 aa35.74■■■■□ 3.31
EPCAM-202ENST00000405271 ARAP1Q96P48 1450 aa35.69■■■■□ 3.3
EPCAM-202ENST00000405271 LOC105371045A0A1W2PR82 267 aa35.69■■■■□ 3.3
EPCAM-202ENST00000405271 CEP170Q5SW79 1584 aa35.67■■■■□ 3.3
EPCAM-202ENST00000405271 EHMT2Q96KQ7 1210 aa35.64■■■■□ 3.3
EPCAM-202ENST00000405271 TNIKQ9UKE5 1360 aa35.62■■■■□ 3.29
EPCAM-202ENST00000405271 UBTFP17480 764 aaKnown RBP35.59■■■■□ 3.29
EPCAM-202ENST00000405271 IQGAP2Q13576 1575 aa35.49■■■■□ 3.27
EPCAM-202ENST00000405271 JPH4Q96JJ6 628 aa35.48■■■■□ 3.27
EPCAM-202ENST00000405271 ERCC6L2Q5T890 1561 aa35.43■■■■□ 3.26
EPCAM-202ENST00000405271 KIAA0586Q9BVV6 1533 aa35.43■■■■□ 3.26
EPCAM-202ENST00000405271 SHROOM2Q13796 1616 aa35.42■■■■□ 3.26
EPCAM-202ENST00000405271 CEP162Q5TB80 1403 aa35.38■■■■□ 3.25
EPCAM-202ENST00000405271 PRG4Q92954 1404 aaPredicted RBP35.36■■■■□ 3.25
EPCAM-202ENST00000405271 EFCAB5A4FU69 1503 aa35.3■■■■□ 3.24
EPCAM-202ENST00000405271 UGGT2Q9NYU1 1516 aa35.29■■■■□ 3.24
EPCAM-202ENST00000405271 SAMD9Q5K651 1589 aa35.28■■■■□ 3.24
EPCAM-202ENST00000405271 CLIP1P30622 1438 aa35.26■■■■□ 3.24
EPCAM-202ENST00000405271 ARHGAP35Q9NRY4 1499 aa35.17■■■■□ 3.22
EPCAM-202ENST00000405271 KIAA0556O60303 1618 aa35.15■■■■□ 3.22
EPCAM-202ENST00000405271 TRHP20396 242 aaPredicted RBP35.13■■■■□ 3.21
EPCAM-202ENST00000405271 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
EPCAM-202ENST00000405271 DISP1Q96F81 1524 aa35.06■■■■□ 3.2
EPCAM-202ENST00000405271 CARMIL2Q6F5E8 1435 aa35■■■■□ 3.19
EPCAM-202ENST00000405271 FHOD3Q2V2M9 1422 aa34.95■■■■□ 3.19
EPCAM-202ENST00000405271 PTPRGP23470 1445 aa34.93■■■■□ 3.18
EPCAM-202ENST00000405271 VPS8Q8N3P4 1428 aa34.9■■■■□ 3.18
EPCAM-202ENST00000405271 TTBK1Q5TCY1 1321 aaPredicted RBP34.89■■■■□ 3.18
EPCAM-202ENST00000405271 FMN1Q68DA7 1419 aa34.86■■■■□ 3.17
EPCAM-202ENST00000405271 P3H3Q8IVL6 736 aa34.84■■■■□ 3.17
EPCAM-202ENST00000405271 NPM1P06748 294 aaKnown RBP eCLIP34.83■■■■□ 3.17
EPCAM-202ENST00000405271 PCF11O94913 1555 aaKnown RBP34.82■■■■□ 3.16
EPCAM-202ENST00000405271 ADCY10Q96PN6 1610 aa34.78■■■■□ 3.16
EPCAM-202ENST00000405271 RAPGEF6Q8TEU7 1601 aa34.73■■■■□ 3.15
EPCAM-202ENST00000405271 FYCO1Q9BQS8 1478 aa34.73■■■■□ 3.15
EPCAM-202ENST00000405271 HECW1Q76N89 1606 aa34.71■■■■□ 3.15
EPCAM-202ENST00000405271 CASKIN1Q8WXD9 1431 aa34.69■■■■□ 3.14
EPCAM-202ENST00000405271 LRRIQ1Q96JM4 1722 aa34.69■■■■□ 3.14
EPCAM-202ENST00000405271 ABCA8O94911 1581 aa34.66■■■■□ 3.14
EPCAM-202ENST00000405271 UACAQ9BZF9 1416 aa34.66■■■■□ 3.14
EPCAM-202ENST00000405271 CFAP43Q8NDM7 1665 aa34.65■■■■□ 3.14
EPCAM-202ENST00000405271 MAPKBP1O60336 1514 aa34.61■■■■□ 3.13
EPCAM-202ENST00000405271 UHRF1BP1LA0JNW5 1464 aa34.61■■■■□ 3.13
EPCAM-202ENST00000405271 ABCC2Q92887 1545 aa34.59■■■■□ 3.13
EPCAM-202ENST00000405271 PLB1Q6P1J6 1458 aa34.56■■■■□ 3.12
EPCAM-202ENST00000405271 FAM69CQ0P6D2 419 aa34.55■■■■□ 3.12
EPCAM-202ENST00000405271 ABCC10Q5T3U5 1492 aa34.55■■■■□ 3.12
EPCAM-202ENST00000405271 MAP3K1Q13233 1512 aa34.53■■■■□ 3.12
EPCAM-202ENST00000405271 TIAM1Q13009 1591 aa34.52■■■■□ 3.12
EPCAM-202ENST00000405271 CCDC18Q5T9S5 1454 aa34.52■■■■□ 3.12
EPCAM-202ENST00000405271 NUP153P49790 1475 aaKnown RBP34.49■■■■□ 3.11
EPCAM-202ENST00000405271 KDM5BQ9UGL1 1544 aa34.45■■■■□ 3.11
EPCAM-202ENST00000405271 KIF13AQ9H1H9 1805 aa34.45■■■■□ 3.11
EPCAM-202ENST00000405271 EPRSP07814 1512 aaKnown RBP34.45■■■■□ 3.1
EPCAM-202ENST00000405271 ASXL2Q76L83 1435 aa34.43■■■■□ 3.1
EPCAM-202ENST00000405271 APLP2Q06481 763 aa34.4■■■■□ 3.1
EPCAM-202ENST00000405271 DIP2BQ9P265 1576 aa34.4■■■■□ 3.1
EPCAM-202ENST00000405271 ATP1B4Q9UN42 357 aaPredicted RBP34.38■■■■□ 3.09
EPCAM-202ENST00000405271 CDK13Q14004 1512 aaKnown RBP34.37■■■■□ 3.09
EPCAM-202ENST00000405271 ZCCHC11Q5TAX3 1644 aaKnown RBP34.35■■■■□ 3.09
EPCAM-202ENST00000405271 EHBP1L1Q8N3D4 1523 aa34.27■■■■□ 3.08
EPCAM-202ENST00000405271 ATP10BO94823 1461 aa34.26■■■■□ 3.08
EPCAM-202ENST00000405271 LRRC9Q6ZRR7 1453 aa34.26■■■■□ 3.08
EPCAM-202ENST00000405271 ARID3CA6NKF2 412 aa34.22■■■■□ 3.07
EPCAM-202ENST00000405271 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
EPCAM-202ENST00000405271 SUPT6HQ7KZ85 1726 aaKnown RBP34.2■■■■□ 3.07
EPCAM-202ENST00000405271 GLI2P10070 1586 aa34.19■■■■□ 3.06
EPCAM-202ENST00000405271 WDR7Q9Y4E6 1490 aa34.18■■■■□ 3.06
EPCAM-202ENST00000405271 MTUS2Q5JR59 1369 aa34.14■■■■□ 3.06
EPCAM-202ENST00000405271 KCNH8Q96L42 1107 aa34.13■■■■□ 3.05
EPCAM-202ENST00000405271 CDK11AQ9UQ88 783 aaPredicted RBP34.12■■■■□ 3.05
EPCAM-202ENST00000405271 KANK4Q5T7N3 995 aaPredicted RBP34.11■■■■□ 3.05
EPCAM-202ENST00000405271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.1■■■■□ 3.05
EPCAM-202ENST00000405271 HNRNPUL2Q1KMD3 747 aaKnown RBP34.1■■■■□ 3.05
EPCAM-202ENST00000405271 TROQ12816 1431 aaPredicted RBP34.09■■■■□ 3.05
EPCAM-202ENST00000405271 TSPOAP1O95153 1857 aa34.08■■■■□ 3.05
EPCAM-202ENST00000405271 KIF14Q15058 1648 aa34.08■■■■□ 3.05
EPCAM-202ENST00000405271 PPARGC1BQ86YN6 1023 aaKnown RBP34.04■■■■□ 3.04
EPCAM-202ENST00000405271 PLEKHD1A6NEE1 506 aa33.99■■■■□ 3.03
EPCAM-202ENST00000405271 MAP3K4Q9Y6R4 1608 aa33.99■■■■□ 3.03
EPCAM-202ENST00000405271 NCOA2Q15596 1464 aa33.97■■■■□ 3.03
EPCAM-202ENST00000405271 ITSN2Q9NZM3 1697 aa33.97■■■■□ 3.03
EPCAM-202ENST00000405271 PPRC1Q5VV67 1664 aaKnown RBP33.96■■■■□ 3.03
EPCAM-202ENST00000405271 CD109Q6YHK3 1445 aa33.94■■■■□ 3.02
EPCAM-202ENST00000405271 KDM6BO15054 1643 aa33.91■■■■□ 3.02
EPCAM-202ENST00000405271 CDC42BPAQ5VT25 1732 aa33.91■■■■□ 3.02
EPCAM-202ENST00000405271 TEX14Q8IWB6 1497 aa33.89■■■■□ 3.02
EPCAM-202ENST00000405271 MYO5CQ9NQX4 1742 aa33.89■■■■□ 3.02
EPCAM-202ENST00000405271 TTC37Q6PGP7 1564 aa33.85■■■■□ 3.01
EPCAM-202ENST00000405271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.84■■■■□ 3.015e-7■□□□□ 8.9
EPCAM-202ENST00000405271 ABCA9Q8IUA7 1624 aa33.84■■■■□ 3.01
EPCAM-202ENST00000405271 COL17A1Q9UMD9 1497 aaPredicted RBP33.83■■■■□ 3.01
EPCAM-202ENST00000405271 PREX2Q70Z35 1606 aa33.82■■■■□ 3.01
EPCAM-202ENST00000405271 PHLDB1Q86UU1 1377 aa33.82■■■■□ 3
EPCAM-202ENST00000405271 MYOM3Q5VTT5 1437 aa33.8■■■■□ 3
EPCAM-202ENST00000405271 CDC42BPBQ9Y5S2 1711 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms