RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
SNRPD3-203ENST00000404603 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
SNRPD3-203ENST00000404603 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
SNRPD3-203ENST00000404603 ADAMTS12P58397 1594 aa13.83□□□□□ -0.19
SNRPD3-203ENST00000404603 IGF1RP08069 1367 aa13.82□□□□□ -0.2
SNRPD3-203ENST00000404603 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
SNRPD3-203ENST00000404603 FBLN2P98095 1184 aa13.78□□□□□ -0.2
SNRPD3-203ENST00000404603 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
SNRPD3-203ENST00000404603 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
SNRPD3-203ENST00000404603 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
SNRPD3-203ENST00000404603 CHD1O14646 1710 aa13.77□□□□□ -0.21
SNRPD3-203ENST00000404603 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.21
SNRPD3-203ENST00000404603 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
SNRPD3-203ENST00000404603 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
SNRPD3-203ENST00000404603 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
SNRPD3-203ENST00000404603 KIF21BO75037 1637 aa13.71□□□□□ -0.22
SNRPD3-203ENST00000404603 NUP160Q12769 1436 aa13.7□□□□□ -0.22
SNRPD3-203ENST00000404603 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
SNRPD3-203ENST00000404603 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
SNRPD3-203ENST00000404603 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
SNRPD3-203ENST00000404603 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
SNRPD3-203ENST00000404603 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
SNRPD3-203ENST00000404603 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
SNRPD3-203ENST00000404603 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
SNRPD3-203ENST00000404603 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
SNRPD3-203ENST00000404603 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
SNRPD3-203ENST00000404603 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
SNRPD3-203ENST00000404603 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
SNRPD3-203ENST00000404603 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
SNRPD3-203ENST00000404603 CARMIL2Q6F5E8 1435 aa13.57□□□□□ -0.24
SNRPD3-203ENST00000404603 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
SNRPD3-203ENST00000404603 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
SNRPD3-203ENST00000404603 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
SNRPD3-203ENST00000404603 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
SNRPD3-203ENST00000404603 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
SNRPD3-203ENST00000404603 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
SNRPD3-203ENST00000404603 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
SNRPD3-203ENST00000404603 TNIKQ9UKE5 1360 aa13.5□□□□□ -0.25
SNRPD3-203ENST00000404603 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
SNRPD3-203ENST00000404603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.251e-8■■■□□ 17.8
SNRPD3-203ENST00000404603 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SNRPD3-203ENST00000404603 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
SNRPD3-203ENST00000404603 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
SNRPD3-203ENST00000404603 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
SNRPD3-203ENST00000404603 DISP1Q96F81 1524 aa13.42□□□□□ -0.26
SNRPD3-203ENST00000404603 PTPRGP23470 1445 aa13.4□□□□□ -0.26
SNRPD3-203ENST00000404603 CLIP1P30622 1438 aa13.39□□□□□ -0.27
SNRPD3-203ENST00000404603 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
SNRPD3-203ENST00000404603 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
SNRPD3-203ENST00000404603 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
SNRPD3-203ENST00000404603 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
SNRPD3-203ENST00000404603 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
SNRPD3-203ENST00000404603 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
SNRPD3-203ENST00000404603 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
SNRPD3-203ENST00000404603 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNRPD3-203ENST00000404603 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
SNRPD3-203ENST00000404603 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
SNRPD3-203ENST00000404603 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
SNRPD3-203ENST00000404603 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
SNRPD3-203ENST00000404603 ABCA8O94911 1581 aa13.27□□□□□ -0.29
SNRPD3-203ENST00000404603 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
SNRPD3-203ENST00000404603 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
SNRPD3-203ENST00000404603 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
SNRPD3-203ENST00000404603 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
SNRPD3-203ENST00000404603 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
SNRPD3-203ENST00000404603 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
SNRPD3-203ENST00000404603 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
SNRPD3-203ENST00000404603 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
SNRPD3-203ENST00000404603 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
SNRPD3-203ENST00000404603 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
SNRPD3-203ENST00000404603 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
SNRPD3-203ENST00000404603 KCNA4P22459 653 aa13.21□□□□□ -0.29
SNRPD3-203ENST00000404603 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
SNRPD3-203ENST00000404603 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
SNRPD3-203ENST00000404603 APLP2Q06481 763 aa13.18□□□□□ -0.3
SNRPD3-203ENST00000404603 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
SNRPD3-203ENST00000404603 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
SNRPD3-203ENST00000404603 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SNRPD3-203ENST00000404603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
SNRPD3-203ENST00000404603 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
SNRPD3-203ENST00000404603 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
SNRPD3-203ENST00000404603 EPRSP07814 1512 aaKnown RBP13.16□□□□□ -0.3
SNRPD3-203ENST00000404603 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
SNRPD3-203ENST00000404603 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SNRPD3-203ENST00000404603 ATP10BO94823 1461 aa13.14□□□□□ -0.31
SNRPD3-203ENST00000404603 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
SNRPD3-203ENST00000404603 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
SNRPD3-203ENST00000404603 ASXL2Q76L83 1435 aa13.13□□□□□ -0.31
SNRPD3-203ENST00000404603 ABCC10Q5T3U5 1492 aa13.09□□□□□ -0.31
SNRPD3-203ENST00000404603 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
SNRPD3-203ENST00000404603 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 GLI2P10070 1586 aa13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
SNRPD3-203ENST00000404603 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
SNRPD3-203ENST00000404603 KIF14Q15058 1648 aa13.06□□□□□ -0.32
SNRPD3-203ENST00000404603 DIP2BQ9P265 1576 aa13.05□□□□□ -0.32
SNRPD3-203ENST00000404603 ARID3CA6NKF2 412 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms