RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
DNMT3A-205ENST00000402667 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
DNMT3A-205ENST00000402667 DIEXFQ68CQ4 756 aaKnown RBP25.22■■□□□ 1.63
DNMT3A-205ENST00000402667 CTTNBP2Q8WZ74 1663 aa25.21■■□□□ 1.63
DNMT3A-205ENST00000402667 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
DNMT3A-205ENST00000402667 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
DNMT3A-205ENST00000402667 FHOD3Q2V2M9 1422 aa25.21■■□□□ 1.63
DNMT3A-205ENST00000402667 PCF11O94913 1555 aaKnown RBP25.19■■□□□ 1.62
DNMT3A-205ENST00000402667 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
DNMT3A-205ENST00000402667 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
DNMT3A-205ENST00000402667 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
DNMT3A-205ENST00000402667 CFAP43Q8NDM7 1665 aa25.13■■□□□ 1.61
DNMT3A-205ENST00000402667 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
DNMT3A-205ENST00000402667 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
DNMT3A-205ENST00000402667 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
DNMT3A-205ENST00000402667 CASKIN1Q8WXD9 1431 aa25.11■■□□□ 1.61
DNMT3A-205ENST00000402667 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.611e-7■■■■■ 30
DNMT3A-205ENST00000402667 PHLDB1Q86UU1 1377 aa25.09■■□□□ 1.61
DNMT3A-205ENST00000402667 ITGAEP38570 1179 aa25.09■■□□□ 1.61
DNMT3A-205ENST00000402667 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
DNMT3A-205ENST00000402667 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
DNMT3A-205ENST00000402667 SAMD9Q5K651 1589 aa25.02■■□□□ 1.6
DNMT3A-205ENST00000402667 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
DNMT3A-205ENST00000402667 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
DNMT3A-205ENST00000402667 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.58
DNMT3A-205ENST00000402667 FAM50AQ14320 339 aaKnown RBP24.95■■□□□ 1.58
DNMT3A-205ENST00000402667 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
DNMT3A-205ENST00000402667 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
DNMT3A-205ENST00000402667 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
DNMT3A-205ENST00000402667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.86■■□□□ 1.57
DNMT3A-205ENST00000402667 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
DNMT3A-205ENST00000402667 IFT140Q96RY7 1462 aa24.84■■□□□ 1.57
DNMT3A-205ENST00000402667 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
DNMT3A-205ENST00000402667 WDR62O43379 1518 aa24.84■■□□□ 1.57
DNMT3A-205ENST00000402667 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-205ENST00000402667 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
DNMT3A-205ENST00000402667 IQGAP2Q13576 1575 aa24.8■■□□□ 1.56
DNMT3A-205ENST00000402667 FGD6Q6ZV73 1430 aa24.79■■□□□ 1.56
DNMT3A-205ENST00000402667 MAPKBP1O60336 1514 aa24.79■■□□□ 1.56
DNMT3A-205ENST00000402667 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
DNMT3A-205ENST00000402667 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
DNMT3A-205ENST00000402667 NCOA2Q15596 1464 aa24.73■■□□□ 1.55
DNMT3A-205ENST00000402667 MIER1Q8N108 512 aa24.72■■□□□ 1.55
DNMT3A-205ENST00000402667 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
DNMT3A-205ENST00000402667 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
DNMT3A-205ENST00000402667 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
DNMT3A-205ENST00000402667 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
DNMT3A-205ENST00000402667 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
DNMT3A-205ENST00000402667 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
DNMT3A-205ENST00000402667 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
DNMT3A-205ENST00000402667 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
DNMT3A-205ENST00000402667 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
DNMT3A-205ENST00000402667 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
DNMT3A-205ENST00000402667 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
DNMT3A-205ENST00000402667 PTPRKQ15262 1439 aa24.63■■□□□ 1.53
DNMT3A-205ENST00000402667 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
DNMT3A-205ENST00000402667 KIAA0586Q9BVV6 1533 aa24.63■■□□□ 1.53
DNMT3A-205ENST00000402667 EPRSP07814 1512 aaKnown RBP24.62■■□□□ 1.53
DNMT3A-205ENST00000402667 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
DNMT3A-205ENST00000402667 SIN3AQ96ST3 1273 aa24.59■■□□□ 1.53
DNMT3A-205ENST00000402667 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
DNMT3A-205ENST00000402667 PTPN23Q9H3S7 1636 aa24.56■■□□□ 1.52
DNMT3A-205ENST00000402667 CDK13Q14004 1512 aaKnown RBP24.55■■□□□ 1.52
DNMT3A-205ENST00000402667 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
DNMT3A-205ENST00000402667 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
DNMT3A-205ENST00000402667 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
DNMT3A-205ENST00000402667 TIMELESSQ9UNS1 1208 aa24.51■■□□□ 1.51
DNMT3A-205ENST00000402667 NAIPQ13075 1403 aa24.5■■□□□ 1.51
DNMT3A-205ENST00000402667 TCOF1Q13428 1488 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-205ENST00000402667 ARID3CA6NKF2 412 aa24.5■■□□□ 1.51
DNMT3A-205ENST00000402667 YTHDC1Q96MU7 727 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-205ENST00000402667 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
DNMT3A-205ENST00000402667 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
DNMT3A-205ENST00000402667 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
DNMT3A-205ENST00000402667 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
DNMT3A-205ENST00000402667 NUP153P49790 1475 aaKnown RBP24.42■■□□□ 1.5
DNMT3A-205ENST00000402667 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
DNMT3A-205ENST00000402667 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
DNMT3A-205ENST00000402667 GTF3C3Q9Y5Q9 886 aa24.4■■□□□ 1.5
DNMT3A-205ENST00000402667 FBLN2P98095 1184 aa24.39■■□□□ 1.5
DNMT3A-205ENST00000402667 PPP1R15AO75807 674 aaPredicted RBP24.38■■□□□ 1.49
DNMT3A-205ENST00000402667 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
DNMT3A-205ENST00000402667 CHIC2Q9UKJ5 165 aa24.38■■□□□ 1.49
DNMT3A-205ENST00000402667 NUP160Q12769 1436 aa24.34■■□□□ 1.49
DNMT3A-205ENST00000402667 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
DNMT3A-205ENST00000402667 CDK11AQ9UQ88 783 aaPredicted RBP24.33■■□□□ 1.49
DNMT3A-205ENST00000402667 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
DNMT3A-205ENST00000402667 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
DNMT3A-205ENST00000402667 TONSLQ96HA7 1378 aa24.3■■□□□ 1.48
DNMT3A-205ENST00000402667 PLB1Q6P1J6 1458 aa24.28■■□□□ 1.48
DNMT3A-205ENST00000402667 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
DNMT3A-205ENST00000402667 KDM6BO15054 1643 aa24.25■■□□□ 1.47
DNMT3A-205ENST00000402667 TROQ12816 1431 aaPredicted RBP24.24■■□□□ 1.47
DNMT3A-205ENST00000402667 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
DNMT3A-205ENST00000402667 DAPK1P53355 1430 aa24.23■■□□□ 1.47
DNMT3A-205ENST00000402667 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
DNMT3A-205ENST00000402667 ZNF644Q9H582 1327 aaPredicted RBP24.23■■□□□ 1.47
DNMT3A-205ENST00000402667 ABCC5O15440 1437 aa24.21■■□□□ 1.47
DNMT3A-205ENST00000402667 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
DNMT3A-205ENST00000402667 ROCK1Q13464 1354 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms