RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
DNMT3A-205ENST00000402667 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
DNMT3A-205ENST00000402667 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
DNMT3A-205ENST00000402667 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.46
DNMT3A-205ENST00000402667 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
DNMT3A-205ENST00000402667 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
DNMT3A-205ENST00000402667 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
DNMT3A-205ENST00000402667 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
DNMT3A-205ENST00000402667 ABCC9O60706 1549 aa28.95■■■□□ 2.22
DNMT3A-205ENST00000402667 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
DNMT3A-205ENST00000402667 NACADO15069 1562 aa28.82■■■□□ 2.2
DNMT3A-205ENST00000402667 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
DNMT3A-205ENST00000402667 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
DNMT3A-205ENST00000402667 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
DNMT3A-205ENST00000402667 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
DNMT3A-205ENST00000402667 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.09
DNMT3A-205ENST00000402667 WIZO95785 1651 aa27.95■■■□□ 2.07
DNMT3A-205ENST00000402667 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
DNMT3A-205ENST00000402667 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
DNMT3A-205ENST00000402667 LOC105371045A0A1W2PR82 267 aa27.85■■■□□ 2.05
DNMT3A-205ENST00000402667 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
DNMT3A-205ENST00000402667 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
DNMT3A-205ENST00000402667 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
DNMT3A-205ENST00000402667 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
DNMT3A-205ENST00000402667 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
DNMT3A-205ENST00000402667 EIF4G1Q04637 1599 aaKnown RBP27.46■■□□□ 1.99
DNMT3A-205ENST00000402667 FAM9AQ8IZU1 332 aaPredicted RBP27.43■■□□□ 1.98
DNMT3A-205ENST00000402667 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
DNMT3A-205ENST00000402667 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
DNMT3A-205ENST00000402667 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
DNMT3A-205ENST00000402667 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
DNMT3A-205ENST00000402667 HRCP23327 699 aa27.23■■□□□ 1.95
DNMT3A-205ENST00000402667 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
DNMT3A-205ENST00000402667 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
DNMT3A-205ENST00000402667 TRIM26Q12899 539 aaPredicted RBP27.1■■□□□ 1.93
DNMT3A-205ENST00000402667 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
DNMT3A-205ENST00000402667 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
DNMT3A-205ENST00000402667 SOGA1O94964 1423 aa26.84■■□□□ 1.89
DNMT3A-205ENST00000402667 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
DNMT3A-205ENST00000402667 EEA1Q15075 1411 aa26.76■■□□□ 1.87
DNMT3A-205ENST00000402667 RUSC2Q8N2Y8 1516 aa26.72■■□□□ 1.87
DNMT3A-205ENST00000402667 CSRNP3Q8WYN3 585 aa26.7■■□□□ 1.86
DNMT3A-205ENST00000402667 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
DNMT3A-205ENST00000402667 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
DNMT3A-205ENST00000402667 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
DNMT3A-205ENST00000402667 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
DNMT3A-205ENST00000402667 TNIKQ9UKE5 1360 aa26.6■■□□□ 1.85
DNMT3A-205ENST00000402667 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
DNMT3A-205ENST00000402667 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
DNMT3A-205ENST00000402667 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
DNMT3A-205ENST00000402667 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
DNMT3A-205ENST00000402667 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
DNMT3A-205ENST00000402667 KIF21BO75037 1637 aa26.38■■□□□ 1.81
DNMT3A-205ENST00000402667 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
DNMT3A-205ENST00000402667 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
DNMT3A-205ENST00000402667 CFTRP13569 1480 aa26.32■■□□□ 1.8
DNMT3A-205ENST00000402667 CUX1P39880 1505 aa26.23■■□□□ 1.79
DNMT3A-205ENST00000402667 RAPGEF2Q9Y4G8 1499 aa26.22■■□□□ 1.79
DNMT3A-205ENST00000402667 CLIP1P30622 1438 aa26.16■■□□□ 1.78
DNMT3A-205ENST00000402667 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
DNMT3A-205ENST00000402667 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
DNMT3A-205ENST00000402667 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
DNMT3A-205ENST00000402667 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
DNMT3A-205ENST00000402667 PRXQ9BXM0 1461 aa26.07■■□□□ 1.76
DNMT3A-205ENST00000402667 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
DNMT3A-205ENST00000402667 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
DNMT3A-205ENST00000402667 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.76
DNMT3A-205ENST00000402667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
DNMT3A-205ENST00000402667 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
DNMT3A-205ENST00000402667 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
DNMT3A-205ENST00000402667 APLP2Q06481 763 aa25.85■■□□□ 1.73
DNMT3A-205ENST00000402667 CUX2O14529 1486 aa25.83■■□□□ 1.73
DNMT3A-205ENST00000402667 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
DNMT3A-205ENST00000402667 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
DNMT3A-205ENST00000402667 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
DNMT3A-205ENST00000402667 IGF1RP08069 1367 aa25.79■■□□□ 1.72
DNMT3A-205ENST00000402667 NESP48681 1621 aa25.69■■□□□ 1.7
DNMT3A-205ENST00000402667 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
DNMT3A-205ENST00000402667 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
DNMT3A-205ENST00000402667 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.7
DNMT3A-205ENST00000402667 HNRNPUL2Q1KMD3 747 aaKnown RBP25.64■■□□□ 1.69
DNMT3A-205ENST00000402667 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
DNMT3A-205ENST00000402667 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
DNMT3A-205ENST00000402667 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
DNMT3A-205ENST00000402667 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
DNMT3A-205ENST00000402667 KANK4Q5T7N3 995 aaPredicted RBP25.55■■□□□ 1.68
DNMT3A-205ENST00000402667 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
DNMT3A-205ENST00000402667 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
DNMT3A-205ENST00000402667 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
DNMT3A-205ENST00000402667 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
DNMT3A-205ENST00000402667 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
DNMT3A-205ENST00000402667 CUL7Q14999 1698 aa25.35■■□□□ 1.65
DNMT3A-205ENST00000402667 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
DNMT3A-205ENST00000402667 MAP3K1Q13233 1512 aa25.32■■□□□ 1.64
DNMT3A-205ENST00000402667 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
DNMT3A-205ENST00000402667 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
DNMT3A-205ENST00000402667 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
DNMT3A-205ENST00000402667 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
DNMT3A-205ENST00000402667 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
DNMT3A-205ENST00000402667 CCNB3Q8WWL7 1395 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms