RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 JPH4Q96JJ6 628 aa43.88■■■■■ 4.61
CGREF1-204ENST00000402550 EHMT2Q96KQ7 1210 aa43.84■■■■■ 4.61
CGREF1-204ENST00000402550 SHROOM2Q13796 1616 aa43.79■■■■■ 4.6
CGREF1-204ENST00000402550 GOLGA3Q08378 1498 aa43.77■■■■■ 4.6
CGREF1-204ENST00000402550 IQGAP2Q13576 1575 aa43.77■■■■■ 4.6
CGREF1-204ENST00000402550 CTTNBP2Q8WZ74 1663 aa43.76■■■■■ 4.6
CGREF1-204ENST00000402550 ARHGEF11O15085 1522 aa43.74■■■■■ 4.59
CGREF1-204ENST00000402550 UBTFP17480 764 aaKnown RBP43.71■■■■■ 4.59
CGREF1-204ENST00000402550 PRG4Q92954 1404 aaPredicted RBP43.68■■■■■ 4.58
CGREF1-204ENST00000402550 RIMBP3CA6NJZ7 1639 aa43.67■■■■■ 4.58
CGREF1-204ENST00000402550 RIMBP3BA6NNM3 1639 aa43.67■■■■■ 4.58
CGREF1-204ENST00000402550 RIMBP3Q9UFD9 1639 aa43.67■■■■■ 4.58
CGREF1-204ENST00000402550 ERCC6L2Q5T890 1561 aa43.61■■■■■ 4.57
CGREF1-204ENST00000402550 UGGT2Q9NYU1 1516 aa43.57■■■■■ 4.56
CGREF1-204ENST00000402550 LOC105371045A0A1W2PR82 267 aa43.5■■■■■ 4.55
CGREF1-204ENST00000402550 CARMIL2Q6F5E8 1435 aa43.47■■■■■ 4.55
CGREF1-204ENST00000402550 DISP1Q96F81 1524 aa43.46■■■■■ 4.55
CGREF1-204ENST00000402550 ARAP1Q96P48 1450 aa43.43■■■■■ 4.54
CGREF1-204ENST00000402550 RANGAP1P46060 587 aaPredicted RBP43.41■■■■■ 4.54
CGREF1-204ENST00000402550 CYB5RLQ6IPT4 315 aa43.41■■■■■ 4.54
CGREF1-204ENST00000402550 TNIKQ9UKE5 1360 aa43.37■■■■■ 4.53
CGREF1-204ENST00000402550 KIAA0556O60303 1618 aa43.34■■■■■ 4.53
CGREF1-204ENST00000402550 P3H3Q8IVL6 736 aa43.27■■■■■ 4.52
CGREF1-204ENST00000402550 SAMD9Q5K651 1589 aa43.25■■■■■ 4.51
CGREF1-204ENST00000402550 PTPRGP23470 1445 aa43.24■■■■■ 4.51
CGREF1-204ENST00000402550 TTBK1Q5TCY1 1321 aaPredicted RBP43.23■■■■■ 4.51
CGREF1-204ENST00000402550 EFCAB5A4FU69 1503 aa43.16■■■■■ 4.5
CGREF1-204ENST00000402550 ARHGAP35Q9NRY4 1499 aa43.1■■■■■ 4.49
CGREF1-204ENST00000402550 FHOD3Q2V2M9 1422 aa43.06■■■■■ 4.48
CGREF1-204ENST00000402550 CLIP1P30622 1438 aa43.03■■■■■ 4.48
CGREF1-204ENST00000402550 CEP162Q5TB80 1403 aa43.02■■■■■ 4.48
CGREF1-204ENST00000402550 UACAQ9BZF9 1416 aa42.95■■■■■ 4.47
CGREF1-204ENST00000402550 PLB1Q6P1J6 1458 aa42.91■■■■■ 4.46
CGREF1-204ENST00000402550 ADCY10Q96PN6 1610 aa42.89■■■■■ 4.46
CGREF1-204ENST00000402550 UHRF1BP1LA0JNW5 1464 aa42.85■■■■■ 4.45
CGREF1-204ENST00000402550 ABCA8O94911 1581 aa42.85■■■■■ 4.45
CGREF1-204ENST00000402550 ABCC2Q92887 1545 aa42.83■■■■■ 4.45
CGREF1-204ENST00000402550 FMN1Q68DA7 1419 aa42.8■■■■■ 4.44
CGREF1-204ENST00000402550 NPM1P06748 294 aaKnown RBP eCLIP42.77■■■■■ 4.44
CGREF1-204ENST00000402550 RAPGEF6Q8TEU7 1601 aa42.72■■■■■ 4.43
CGREF1-204ENST00000402550 KDM5BQ9UGL1 1544 aa42.67■■■■■ 4.42
CGREF1-204ENST00000402550 NUP153P49790 1475 aaKnown RBP42.61■■■■■ 4.41
CGREF1-204ENST00000402550 ARID3CA6NKF2 412 aa42.59■■■■■ 4.41
CGREF1-204ENST00000402550 ATP1B4Q9UN42 357 aaPredicted RBP42.58■■■■■ 4.41
CGREF1-204ENST00000402550 ATP10BO94823 1461 aa42.55■■■■■ 4.4
CGREF1-204ENST00000402550 ZCCHC11Q5TAX3 1644 aaKnown RBP42.55■■■■■ 4.4
CGREF1-204ENST00000402550 CASKIN1Q8WXD9 1431 aa42.54■■■■■ 4.4
CGREF1-204ENST00000402550 MAPKBP1O60336 1514 aa42.49■■■■■ 4.39
CGREF1-204ENST00000402550 PCF11O94913 1555 aaKnown RBP42.49■■■■■ 4.39
CGREF1-204ENST00000402550 HECW1Q76N89 1606 aa42.47■■■■■ 4.39
CGREF1-204ENST00000402550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.46■■■■■ 4.39
CGREF1-204ENST00000402550 HNRNPUL2Q1KMD3 747 aaKnown RBP42.46■■■■■ 4.39
CGREF1-204ENST00000402550 FYCO1Q9BQS8 1478 aa42.43■■■■■ 4.38
CGREF1-204ENST00000402550 ASXL2Q76L83 1435 aa42.43■■■■■ 4.38
CGREF1-204ENST00000402550 VPS8Q8N3P4 1428 aa42.43■■■■■ 4.38
CGREF1-204ENST00000402550 EPRSP07814 1512 aaKnown RBP42.41■■■■■ 4.38
CGREF1-204ENST00000402550 CDK13Q14004 1512 aaKnown RBP42.36■■■■■ 4.37
CGREF1-204ENST00000402550 LRRIQ1Q96JM4 1722 aa42.34■■■■■ 4.37
CGREF1-204ENST00000402550 TRHP20396 242 aaPredicted RBP42.31■■■■■ 4.36
CGREF1-204ENST00000402550 WDR7Q9Y4E6 1490 aa42.28■■■■■ 4.36
CGREF1-204ENST00000402550 PLEKHD1A6NEE1 506 aa42.27■■■■■ 4.36
CGREF1-204ENST00000402550 CCDC18Q5T9S5 1454 aa42.27■■■■■ 4.36
CGREF1-204ENST00000402550 ABCC10Q5T3U5 1492 aa42.26■■■■■ 4.36
CGREF1-204ENST00000402550 CDK11AQ9UQ88 783 aaPredicted RBP42.22■■■■■ 4.35
CGREF1-204ENST00000402550 KCNH8Q96L42 1107 aa42.22■■■■■ 4.35
CGREF1-204ENST00000402550 FAM69CQ0P6D2 419 aa42.21■■■■■ 4.35
CGREF1-204ENST00000402550 DIP2BQ9P265 1576 aa42.16■■■■■ 4.34
CGREF1-204ENST00000402550 KIF13AQ9H1H9 1805 aa42.14■■■■■ 4.34
CGREF1-204ENST00000402550 APLP2Q06481 763 aa42.08■■■■■ 4.33
CGREF1-204ENST00000402550 GLI2P10070 1586 aa42.07■■■■■ 4.32
CGREF1-204ENST00000402550 TROQ12816 1431 aaPredicted RBP42.04■■■■■ 4.32
CGREF1-204ENST00000402550 MAGI3Q5TCQ9 1506 aa42.02■■■■■ 4.32
CGREF1-204ENST00000402550 TIAM1Q13009 1591 aa41.99■■■■■ 4.31
CGREF1-204ENST00000402550 MAP3K1Q13233 1512 aa41.97■■■■■ 4.31
CGREF1-204ENST00000402550 CFAP43Q8NDM7 1665 aa41.95■■■■■ 4.31
CGREF1-204ENST00000402550 MTUS2Q5JR59 1369 aa41.94■■■■■ 4.3
CGREF1-204ENST00000402550 ABCA9Q8IUA7 1624 aa41.9■■■■■ 4.3
CGREF1-204ENST00000402550 MAP3K4Q9Y6R4 1608 aa41.9■■■■■ 4.3
CGREF1-204ENST00000402550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.87■■■■■ 4.29
CGREF1-204ENST00000402550 CD109Q6YHK3 1445 aa41.87■■■■■ 4.29
CGREF1-204ENST00000402550 KANK4Q5T7N3 995 aaPredicted RBP41.87■■■■■ 4.29
CGREF1-204ENST00000402550 KIF14Q15058 1648 aa41.86■■■■■ 4.29
CGREF1-204ENST00000402550 LRRC9Q6ZRR7 1453 aa41.83■■■■■ 4.29
CGREF1-204ENST00000402550 TSPOAP1O95153 1857 aa41.83■■■■■ 4.29
CGREF1-204ENST00000402550 EHBP1L1Q8N3D4 1523 aa41.81■■■■■ 4.28
CGREF1-204ENST00000402550 TTC37Q6PGP7 1564 aa41.79■■■■■ 4.28
CGREF1-204ENST00000402550 PPRC1Q5VV67 1664 aaKnown RBP41.74■■■■■ 4.27
CGREF1-204ENST00000402550 PLCH2O75038 1416 aa41.67■■■■■ 4.26
CGREF1-204ENST00000402550 TEX14Q8IWB6 1497 aa41.65■■■■■ 4.26
CGREF1-204ENST00000402550 SUPT6HQ7KZ85 1726 aaKnown RBP41.64■■■■■ 4.26
CGREF1-204ENST00000402550 NCOA2Q15596 1464 aa41.62■■■■■ 4.25
CGREF1-204ENST00000402550 MYO5CQ9NQX4 1742 aa41.61■■■■■ 4.25
CGREF1-204ENST00000402550 CCNB3Q8WWL7 1395 aa41.59■■■■■ 4.25
CGREF1-204ENST00000402550 GPATCH8Q9UKJ3 1502 aaKnown RBP41.57■■■■■ 4.25
CGREF1-204ENST00000402550 PPARGC1BQ86YN6 1023 aaKnown RBP41.55■■■■■ 4.24
CGREF1-204ENST00000402550 ARAP3Q8WWN8 1544 aa41.55■■■■■ 4.24
CGREF1-204ENST00000402550 CDC42BPAQ5VT25 1732 aa41.55■■■■■ 4.24
CGREF1-204ENST00000402550 FANCAO15360 1455 aa41.54■■■■■ 4.24
CGREF1-204ENST00000402550 EFCAB2Q5VUJ9 269 aa41.53■■■■■ 4.24
CGREF1-204ENST00000402550 CDC42BPBQ9Y5S2 1711 aa41.53■■■■■ 4.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms