RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
HDAC11-202ENST00000402259 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
HDAC11-202ENST00000402259 CTTNBP2Q8WZ74 1663 aa28.74■■■□□ 2.19
HDAC11-202ENST00000402259 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
HDAC11-202ENST00000402259 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
HDAC11-202ENST00000402259 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
HDAC11-202ENST00000402259 IQGAP2Q13576 1575 aa28.73■■■□□ 2.19
HDAC11-202ENST00000402259 JPH4Q96JJ6 628 aa28.69■■■□□ 2.18
HDAC11-202ENST00000402259 GOLGA3Q08378 1498 aa28.65■■■□□ 2.18
HDAC11-202ENST00000402259 PRG4Q92954 1404 aaPredicted RBP28.61■■■□□ 2.17
HDAC11-202ENST00000402259 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
HDAC11-202ENST00000402259 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
HDAC11-202ENST00000402259 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
HDAC11-202ENST00000402259 CARMIL2Q6F5E8 1435 aa28.52■■■□□ 2.16
HDAC11-202ENST00000402259 DISP1Q96F81 1524 aa28.48■■■□□ 2.15
HDAC11-202ENST00000402259 KIAA0556O60303 1618 aa28.45■■■□□ 2.14
HDAC11-202ENST00000402259 UBTFP17480 764 aaKnown RBP28.45■■■□□ 2.14
HDAC11-202ENST00000402259 TNIKQ9UKE5 1360 aa28.39■■■□□ 2.14
HDAC11-202ENST00000402259 SAMD9Q5K651 1589 aa28.39■■■□□ 2.14
HDAC11-202ENST00000402259 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
HDAC11-202ENST00000402259 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
HDAC11-202ENST00000402259 EFCAB5A4FU69 1503 aa28.34■■■□□ 2.13
HDAC11-202ENST00000402259 PTPRGP23470 1445 aa28.32■■■□□ 2.12
HDAC11-202ENST00000402259 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
HDAC11-202ENST00000402259 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
HDAC11-202ENST00000402259 UHRF1BP1LA0JNW5 1464 aa28.17■■■□□ 2.1
HDAC11-202ENST00000402259 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
HDAC11-202ENST00000402259 UACAQ9BZF9 1416 aa28.17■■■□□ 2.1
HDAC11-202ENST00000402259 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
HDAC11-202ENST00000402259 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
HDAC11-202ENST00000402259 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
HDAC11-202ENST00000402259 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
HDAC11-202ENST00000402259 ABCA8O94911 1581 aa28.13■■■□□ 2.09
HDAC11-202ENST00000402259 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
HDAC11-202ENST00000402259 CLIP1P30622 1438 aa28.11■■■□□ 2.09
HDAC11-202ENST00000402259 PLB1Q6P1J6 1458 aa28.08■■■□□ 2.09
HDAC11-202ENST00000402259 CEP162Q5TB80 1403 aa28.06■■■□□ 2.08
HDAC11-202ENST00000402259 FMN1Q68DA7 1419 aa28.05■■■□□ 2.08
HDAC11-202ENST00000402259 RAPGEF6Q8TEU7 1601 aa28.03■■■□□ 2.08
HDAC11-202ENST00000402259 KDM5BQ9UGL1 1544 aa28.02■■■□□ 2.08
HDAC11-202ENST00000402259 NPM1P06748 294 aaKnown RBP eCLIP28.01■■■□□ 2.07
HDAC11-202ENST00000402259 MAPKBP1O60336 1514 aa27.97■■■□□ 2.07
HDAC11-202ENST00000402259 ZCCHC11Q5TAX3 1644 aaKnown RBP27.94■■■□□ 2.06
HDAC11-202ENST00000402259 NUP153P49790 1475 aaKnown RBP27.91■■■□□ 2.06
HDAC11-202ENST00000402259 HECW1Q76N89 1606 aa27.89■■■□□ 2.05
HDAC11-202ENST00000402259 ATP10BO94823 1461 aa27.86■■■□□ 2.05
HDAC11-202ENST00000402259 CASKIN1Q8WXD9 1431 aa27.85■■■□□ 2.05
HDAC11-202ENST00000402259 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.05
HDAC11-202ENST00000402259 ASXL2Q76L83 1435 aa27.83■■■□□ 2.05
HDAC11-202ENST00000402259 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
HDAC11-202ENST00000402259 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
HDAC11-202ENST00000402259 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
HDAC11-202ENST00000402259 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
HDAC11-202ENST00000402259 DIP2BQ9P265 1576 aa27.74■■■□□ 2.03
HDAC11-202ENST00000402259 CCDC18Q5T9S5 1454 aa27.73■■■□□ 2.03
HDAC11-202ENST00000402259 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
HDAC11-202ENST00000402259 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
HDAC11-202ENST00000402259 KIF13AQ9H1H9 1805 aa27.72■■■□□ 2.03
HDAC11-202ENST00000402259 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
HDAC11-202ENST00000402259 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
HDAC11-202ENST00000402259 GLI2P10070 1586 aa27.69■■■□□ 2.02
HDAC11-202ENST00000402259 ATP1B4Q9UN42 357 aaPredicted RBP27.69■■■□□ 2.02
HDAC11-202ENST00000402259 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
HDAC11-202ENST00000402259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
HDAC11-202ENST00000402259 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
HDAC11-202ENST00000402259 PLEKHD1A6NEE1 506 aa27.63■■■□□ 2.01
HDAC11-202ENST00000402259 CDK11AQ9UQ88 783 aaPredicted RBP27.63■■■□□ 2.01
HDAC11-202ENST00000402259 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
HDAC11-202ENST00000402259 MAP3K4Q9Y6R4 1608 aa27.56■■■□□ 2
HDAC11-202ENST00000402259 TROQ12816 1431 aaPredicted RBP27.55■■■□□ 2
HDAC11-202ENST00000402259 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
HDAC11-202ENST00000402259 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
HDAC11-202ENST00000402259 KCNH8Q96L42 1107 aa27.53■■■□□ 2
HDAC11-202ENST00000402259 MAP3K1Q13233 1512 aa27.52■■■□□ 2
HDAC11-202ENST00000402259 TIAM1Q13009 1591 aa27.49■■□□□ 1.99
HDAC11-202ENST00000402259 MAGI3Q5TCQ9 1506 aa27.49■■□□□ 1.99
HDAC11-202ENST00000402259 KIF14Q15058 1648 aa27.48■■□□□ 1.99
HDAC11-202ENST00000402259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.45■■□□□ 1.98
HDAC11-202ENST00000402259 CD109Q6YHK3 1445 aa27.44■■□□□ 1.98
HDAC11-202ENST00000402259 PPRC1Q5VV67 1664 aaKnown RBP27.44■■□□□ 1.98
HDAC11-202ENST00000402259 TSPOAP1O95153 1857 aa27.44■■□□□ 1.98
HDAC11-202ENST00000402259 EHBP1L1Q8N3D4 1523 aa27.43■■□□□ 1.98
HDAC11-202ENST00000402259 TTC37Q6PGP7 1564 aa27.41■■□□□ 1.98
HDAC11-202ENST00000402259 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
HDAC11-202ENST00000402259 TEX14Q8IWB6 1497 aa27.4■■□□□ 1.98
HDAC11-202ENST00000402259 LRRC9Q6ZRR7 1453 aa27.36■■□□□ 1.97
HDAC11-202ENST00000402259 APLP2Q06481 763 aa27.35■■□□□ 1.97
HDAC11-202ENST00000402259 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
HDAC11-202ENST00000402259 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.97
HDAC11-202ENST00000402259 PLCH2O75038 1416 aa27.31■■□□□ 1.96
HDAC11-202ENST00000402259 SUPT6HQ7KZ85 1726 aaKnown RBP27.3■■□□□ 1.96
HDAC11-202ENST00000402259 CFAP74Q9C0B2 1584 aa27.28■■□□□ 1.96
HDAC11-202ENST00000402259 NEO1Q92859 1461 aa27.27■■□□□ 1.96
HDAC11-202ENST00000402259 PHLDB1Q86UU1 1377 aa27.27■■□□□ 1.96
HDAC11-202ENST00000402259 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
HDAC11-202ENST00000402259 CDC42BPAQ5VT25 1732 aa27.24■■□□□ 1.95
HDAC11-202ENST00000402259 KANK4Q5T7N3 995 aaPredicted RBP27.23■■□□□ 1.95
HDAC11-202ENST00000402259 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
HDAC11-202ENST00000402259 CDC42BPBQ9Y5S2 1711 aa27.22■■□□□ 1.95
HDAC11-202ENST00000402259 FANCAO15360 1455 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms