RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 CARMIL1Q5VZK9 1371 aa41.34■■■■■ 4.21
RSPO4-202ENST00000400634 PRG4Q92954 1404 aaPredicted RBP41.3■■■■■ 4.2
RSPO4-202ENST00000400634 KIAA0586Q9BVV6 1533 aa41.28■■■■■ 4.2
RSPO4-202ENST00000400634 TRHP20396 242 aaPredicted RBP41.2■■■■■ 4.19
RSPO4-202ENST00000400634 RAPGEF2Q9Y4G8 1499 aa41.06■■■■■ 4.16
RSPO4-202ENST00000400634 IQGAP2Q13576 1575 aa40.99■■■■■ 4.15
RSPO4-202ENST00000400634 CARMIL2Q6F5E8 1435 aa40.88■■■■■ 4.13
RSPO4-202ENST00000400634 PRXQ9BXM0 1461 aa40.77■■■■■ 4.12
RSPO4-202ENST00000400634 CTTNBP2Q8WZ74 1663 aa40.77■■■■■ 4.12
RSPO4-202ENST00000400634 ADCY10Q96PN6 1610 aa40.76■■■■■ 4.12
RSPO4-202ENST00000400634 PTPRGP23470 1445 aa40.76■■■■■ 4.11
RSPO4-202ENST00000400634 NPM1P06748 294 aaKnown RBP eCLIP40.75■■■■■ 4.11
RSPO4-202ENST00000400634 TNIKQ9UKE5 1360 aa40.74■■■■■ 4.11
RSPO4-202ENST00000400634 UGGT2Q9NYU1 1516 aa40.74■■■■■ 4.11
RSPO4-202ENST00000400634 DISP1Q96F81 1524 aa40.68■■■■■ 4.1
RSPO4-202ENST00000400634 MAPKBP1O60336 1514 aa40.64■■■■■ 4.1
RSPO4-202ENST00000400634 EEA1Q15075 1411 aa40.64■■■■■ 4.1
RSPO4-202ENST00000400634 KIF13AQ9H1H9 1805 aa40.6■■■■■ 4.09
RSPO4-202ENST00000400634 CSRNP3Q8WYN3 585 aa40.6■■■■■ 4.09
RSPO4-202ENST00000400634 KIAA0556O60303 1618 aa40.6■■■■■ 4.09
RSPO4-202ENST00000400634 TTBK1Q5TCY1 1321 aaPredicted RBP40.58■■■■■ 4.09
RSPO4-202ENST00000400634 GOLGA3Q08378 1498 aa40.51■■■■■ 4.07
RSPO4-202ENST00000400634 UHRF1BP1LA0JNW5 1464 aa40.49■■■■■ 4.07
RSPO4-202ENST00000400634 ABCC10Q5T3U5 1492 aa40.49■■■■■ 4.07
RSPO4-202ENST00000400634 UACAQ9BZF9 1416 aa40.48■■■■■ 4.07
RSPO4-202ENST00000400634 ABCC2Q92887 1545 aa40.47■■■■■ 4.07
RSPO4-202ENST00000400634 DIP2BQ9P265 1576 aa40.42■■■■■ 4.06
RSPO4-202ENST00000400634 FAM69CQ0P6D2 419 aa40.39■■■■■ 4.06
RSPO4-202ENST00000400634 CHIC1Q5VXU3 224 aa40.35■■■■■ 4.05
RSPO4-202ENST00000400634 FAM9AQ8IZU1 332 aaPredicted RBP40.29■■■■■ 4.04
RSPO4-202ENST00000400634 KDM5BQ9UGL1 1544 aa40.28■■■■■ 4.04
RSPO4-202ENST00000400634 PLB1Q6P1J6 1458 aa40.27■■■■■ 4.04
RSPO4-202ENST00000400634 ASXL2Q76L83 1435 aa40.25■■■■■ 4.03
RSPO4-202ENST00000400634 KIF21BO75037 1637 aa40.24■■■■■ 4.03
RSPO4-202ENST00000400634 ZCCHC11Q5TAX3 1644 aaKnown RBP40.22■■■■■ 4.03
RSPO4-202ENST00000400634 ABCA8O94911 1581 aa40.18■■■■■ 4.02
RSPO4-202ENST00000400634 SAMD9Q5K651 1589 aa40.16■■■■■ 4.02
RSPO4-202ENST00000400634 TSPOAP1O95153 1857 aa40.15■■■■■ 4.02
RSPO4-202ENST00000400634 GLI2P10070 1586 aa40.12■■■■■ 4.01
RSPO4-202ENST00000400634 P3H3Q8IVL6 736 aa40.05■■■■■ 4
RSPO4-202ENST00000400634 EPRSP07814 1512 aaKnown RBP40.01■■■■■ 4
RSPO4-202ENST00000400634 WDR7Q9Y4E6 1490 aa39.99■■■■□ 3.99
RSPO4-202ENST00000400634 KDM6BO15054 1643 aa39.93■■■■□ 3.98
RSPO4-202ENST00000400634 EFCAB5A4FU69 1503 aa39.92■■■■□ 3.98
RSPO4-202ENST00000400634 MAP3K4Q9Y6R4 1608 aa39.92■■■■□ 3.98
RSPO4-202ENST00000400634 RANGAP1P46060 587 aaPredicted RBP39.91■■■■□ 3.98
RSPO4-202ENST00000400634 PPRC1Q5VV67 1664 aaKnown RBP39.9■■■■□ 3.98
RSPO4-202ENST00000400634 RAPGEF6Q8TEU7 1601 aa39.9■■■■□ 3.98
RSPO4-202ENST00000400634 UBTFP17480 764 aaKnown RBP39.87■■■■□ 3.97
RSPO4-202ENST00000400634 FHOD3Q2V2M9 1422 aa39.84■■■■□ 3.97
RSPO4-202ENST00000400634 ATP10BO94823 1461 aa39.81■■■■□ 3.96
RSPO4-202ENST00000400634 TEX14Q8IWB6 1497 aa39.8■■■■□ 3.96
RSPO4-202ENST00000400634 EHMT2Q96KQ7 1210 aa39.77■■■■□ 3.96
RSPO4-202ENST00000400634 CFAP43Q8NDM7 1665 aa39.76■■■■□ 3.96
RSPO4-202ENST00000400634 KCNH8Q96L42 1107 aa39.74■■■■□ 3.95
RSPO4-202ENST00000400634 ARID3CA6NKF2 412 aa39.73■■■■□ 3.95
RSPO4-202ENST00000400634 NUP153P49790 1475 aaKnown RBP39.69■■■■□ 3.94
RSPO4-202ENST00000400634 CD109Q6YHK3 1445 aa39.66■■■■□ 3.94
RSPO4-202ENST00000400634 MAGI3Q5TCQ9 1506 aa39.64■■■■□ 3.94
RSPO4-202ENST00000400634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.63■■■■□ 3.93
RSPO4-202ENST00000400634 HNRNPUL2Q1KMD3 747 aaKnown RBP39.63■■■■□ 3.93
RSPO4-202ENST00000400634 ARHGAP35Q9NRY4 1499 aa39.56■■■■□ 3.92
RSPO4-202ENST00000400634 FMN1Q68DA7 1419 aa39.56■■■■□ 3.92
RSPO4-202ENST00000400634 ABCA9Q8IUA7 1624 aa39.54■■■■□ 3.92
RSPO4-202ENST00000400634 AEBP2Q6ZN18 517 aaPredicted RBP39.54■■■■□ 3.92
RSPO4-202ENST00000400634 COL17A1Q9UMD9 1497 aaPredicted RBP39.5■■■■□ 3.91
RSPO4-202ENST00000400634 PLEKHD1A6NEE1 506 aa39.46■■■■□ 3.91
RSPO4-202ENST00000400634 HECW1Q76N89 1606 aa39.43■■■■□ 3.9
RSPO4-202ENST00000400634 PHLDB1Q86UU1 1377 aa39.35■■■■□ 3.89
RSPO4-202ENST00000400634 CDK13Q14004 1512 aaKnown RBP39.35■■■■□ 3.89
RSPO4-202ENST00000400634 ARAP3Q8WWN8 1544 aa39.31■■■■□ 3.88
RSPO4-202ENST00000400634 ATP1B4Q9UN42 357 aaPredicted RBP39.31■■■■□ 3.88
RSPO4-202ENST00000400634 NEO1Q92859 1461 aa39.28■■■■□ 3.88
RSPO4-202ENST00000400634 CDK11AQ9UQ88 783 aaPredicted RBP39.24■■■■□ 3.87
RSPO4-202ENST00000400634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.23■■■■□ 3.87
RSPO4-202ENST00000400634 CLIP1P30622 1438 aa39.18■■■■□ 3.86
RSPO4-202ENST00000400634 TTC37Q6PGP7 1564 aa39.17■■■■□ 3.86
RSPO4-202ENST00000400634 CFAP74Q9C0B2 1584 aa39.16■■■■□ 3.86
RSPO4-202ENST00000400634 LRRIQ1Q96JM4 1722 aa39.16■■■■□ 3.86
RSPO4-202ENST00000400634 CASKIN1Q8WXD9 1431 aa39.15■■■■□ 3.86
RSPO4-202ENST00000400634 KDM4FA0A1W2PPD8 638 aa39.14■■■■□ 3.86
RSPO4-202ENST00000400634 PCF11O94913 1555 aaKnown RBP39.13■■■■□ 3.85
RSPO4-202ENST00000400634 CCDC18Q5T9S5 1454 aa39.1■■■■□ 3.85
RSPO4-202ENST00000400634 FANCAO15360 1455 aa39.09■■■■□ 3.85
RSPO4-202ENST00000400634 TROQ12816 1431 aaPredicted RBP39.06■■■■□ 3.84
RSPO4-202ENST00000400634 KIF14Q15058 1648 aa39.06■■■■□ 3.84
RSPO4-202ENST00000400634 FYCO1Q9BQS8 1478 aa39.05■■■■□ 3.84
RSPO4-202ENST00000400634 ADGRL1O94910 1474 aa39.05■■■■□ 3.84
RSPO4-202ENST00000400634 AKNAQ7Z591 1439 aa39.03■■■■□ 3.84
RSPO4-202ENST00000400634 MYO5CQ9NQX4 1742 aa39.03■■■■□ 3.84
RSPO4-202ENST00000400634 PLCH2O75038 1416 aa39■■■■□ 3.83
RSPO4-202ENST00000400634 RAPGEF3O95398 923 aa39■■■■□ 3.83
RSPO4-202ENST00000400634 FRMPD1Q5SYB0 1578 aa38.98■■■■□ 3.83
RSPO4-202ENST00000400634 DENND4BO75064 1496 aaPredicted RBP38.98■■■■□ 3.83
RSPO4-202ENST00000400634 RICTORQ6R327 1708 aa38.95■■■■□ 3.83
RSPO4-202ENST00000400634 CEP162Q5TB80 1403 aa38.88■■■■□ 3.81
RSPO4-202ENST00000400634 EFCAB2Q5VUJ9 269 aa38.86■■■■□ 3.81
RSPO4-202ENST00000400634 ZMYM4Q5VZL5 1548 aa38.81■■■■□ 3.8
RSPO4-202ENST00000400634 ARHGAP5Q13017 1502 aa38.8■■■■□ 3.8
RSPO4-202ENST00000400634 ARHGEF40Q8TER5 1519 aa38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms