RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
USP16-204ENST00000399976 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
USP16-204ENST00000399976 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
USP16-204ENST00000399976 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
USP16-204ENST00000399976 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
USP16-204ENST00000399976 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
USP16-204ENST00000399976 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
USP16-204ENST00000399976 GOLGA3Q08378 1498 aa12.58□□□□□ -0.39
USP16-204ENST00000399976 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.39
USP16-204ENST00000399976 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
USP16-204ENST00000399976 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
USP16-204ENST00000399976 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
USP16-204ENST00000399976 UHRF1BP1LA0JNW5 1464 aa12.49□□□□□ -0.41
USP16-204ENST00000399976 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
USP16-204ENST00000399976 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
USP16-204ENST00000399976 FBLN2P98095 1184 aa12.45□□□□□ -0.42
USP16-204ENST00000399976 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
USP16-204ENST00000399976 JPH4Q96JJ6 628 aa12.44□□□□□ -0.42
USP16-204ENST00000399976 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
USP16-204ENST00000399976 ABCA8O94911 1581 aa12.43□□□□□ -0.42
USP16-204ENST00000399976 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
USP16-204ENST00000399976 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
USP16-204ENST00000399976 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
USP16-204ENST00000399976 RAPGEF6Q8TEU7 1601 aa12.37□□□□□ -0.43
USP16-204ENST00000399976 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
USP16-204ENST00000399976 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
USP16-204ENST00000399976 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
USP16-204ENST00000399976 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
USP16-204ENST00000399976 PTPRGP23470 1445 aa12.34□□□□□ -0.43
USP16-204ENST00000399976 FMN1Q68DA7 1419 aa12.33□□□□□ -0.44
USP16-204ENST00000399976 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
USP16-204ENST00000399976 GLI2P10070 1586 aa12.32□□□□□ -0.44
USP16-204ENST00000399976 FYCO1Q9BQS8 1478 aa12.29□□□□□ -0.44
USP16-204ENST00000399976 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
USP16-204ENST00000399976 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.45
USP16-204ENST00000399976 MAP3K1Q13233 1512 aa12.27□□□□□ -0.45
USP16-204ENST00000399976 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
USP16-204ENST00000399976 LRRIQ1Q96JM4 1722 aa12.26□□□□□ -0.45
USP16-204ENST00000399976 PLB1Q6P1J6 1458 aa12.26□□□□□ -0.45
USP16-204ENST00000399976 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
USP16-204ENST00000399976 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
USP16-204ENST00000399976 CLIP1P30622 1438 aa12.26□□□□□ -0.45
USP16-204ENST00000399976 CEP162Q5TB80 1403 aa12.24□□□□□ -0.45
USP16-204ENST00000399976 DIP2BQ9P265 1576 aa12.24□□□□□ -0.45
USP16-204ENST00000399976 NUP153P49790 1475 aaKnown RBP12.24□□□□□ -0.45
USP16-204ENST00000399976 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
USP16-204ENST00000399976 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
USP16-204ENST00000399976 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
USP16-204ENST00000399976 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.46
USP16-204ENST00000399976 ABCA9Q8IUA7 1624 aa12.21□□□□□ -0.46
USP16-204ENST00000399976 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.46
USP16-204ENST00000399976 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
USP16-204ENST00000399976 WDR7Q9Y4E6 1490 aa12.19□□□□□ -0.46
USP16-204ENST00000399976 ATP10BO94823 1461 aa12.18□□□□□ -0.46
USP16-204ENST00000399976 EPRSP07814 1512 aaKnown RBP12.18□□□□□ -0.46
USP16-204ENST00000399976 CFAP74Q9C0B2 1584 aa12.17□□□□□ -0.46
USP16-204ENST00000399976 VPS8Q8N3P4 1428 aa12.17□□□□□ -0.46
USP16-204ENST00000399976 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
USP16-204ENST00000399976 PPRC1Q5VV67 1664 aaKnown RBP12.15□□□□□ -0.46
USP16-204ENST00000399976 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
USP16-204ENST00000399976 KIF14Q15058 1648 aa12.13□□□□□ -0.47
USP16-204ENST00000399976 MAGI3Q5TCQ9 1506 aa12.13□□□□□ -0.47
USP16-204ENST00000399976 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
USP16-204ENST00000399976 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
USP16-204ENST00000399976 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP16-204ENST00000399976 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
USP16-204ENST00000399976 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
USP16-204ENST00000399976 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
USP16-204ENST00000399976 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
USP16-204ENST00000399976 TEX14Q8IWB6 1497 aa12.09□□□□□ -0.47
USP16-204ENST00000399976 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
USP16-204ENST00000399976 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
USP16-204ENST00000399976 CDK13Q14004 1512 aaKnown RBP12.07□□□□□ -0.48
USP16-204ENST00000399976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP16-204ENST00000399976 NEO1Q92859 1461 aa12.05□□□□□ -0.48
USP16-204ENST00000399976 CDC42BPAQ5VT25 1732 aa12.05□□□□□ -0.48
USP16-204ENST00000399976 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
USP16-204ENST00000399976 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
USP16-204ENST00000399976 CDC42BPBQ9Y5S2 1711 aa12.02□□□□□ -0.48
USP16-204ENST00000399976 LRRC9Q6ZRR7 1453 aa12□□□□□ -0.49
USP16-204ENST00000399976 P3H3Q8IVL6 736 aa12□□□□□ -0.49
USP16-204ENST00000399976 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
USP16-204ENST00000399976 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
USP16-204ENST00000399976 PLCH2O75038 1416 aa11.98□□□□□ -0.49
USP16-204ENST00000399976 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
USP16-204ENST00000399976 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
USP16-204ENST00000399976 CD109Q6YHK3 1445 aa11.96□□□□□ -0.49
USP16-204ENST00000399976 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.5
USP16-204ENST00000399976 TSPOAP1O95153 1857 aa11.96□□□□□ -0.5
USP16-204ENST00000399976 KDM6BO15054 1643 aa11.94□□□□□ -0.5
USP16-204ENST00000399976 ABCC1P33527 1531 aa11.94□□□□□ -0.5
USP16-204ENST00000399976 KDM5CP41229 1560 aa11.94□□□□□ -0.5
USP16-204ENST00000399976 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
USP16-204ENST00000399976 MIA2Q96PC5 1412 aa11.93□□□□□ -0.5
USP16-204ENST00000399976 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
USP16-204ENST00000399976 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
USP16-204ENST00000399976 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
USP16-204ENST00000399976 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
USP16-204ENST00000399976 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
USP16-204ENST00000399976 NCOA2Q15596 1464 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms