RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NUP160Q12769 1436 aa26.23■■□□□ 1.79
TNRC18-202ENST00000399434 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
TNRC18-202ENST00000399434 IQGAP2Q13576 1575 aa26.18■■□□□ 1.78
TNRC18-202ENST00000399434 FBLN2P98095 1184 aa26.17■■□□□ 1.78
TNRC18-202ENST00000399434 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.78
TNRC18-202ENST00000399434 CLIP1P30622 1438 aa26.13■■□□□ 1.77
TNRC18-202ENST00000399434 SAMD9Q5K651 1589 aa26.09■■□□□ 1.77
TNRC18-202ENST00000399434 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
TNRC18-202ENST00000399434 CLASP1Q7Z460 1538 aa26.08■■□□□ 1.76
TNRC18-202ENST00000399434 UGGT2Q9NYU1 1516 aa26.06■■□□□ 1.76
TNRC18-202ENST00000399434 EFCAB5A4FU69 1503 aa26.05■■□□□ 1.76
TNRC18-202ENST00000399434 ARAP1Q96P48 1450 aa26.03■■□□□ 1.76
TNRC18-202ENST00000399434 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
TNRC18-202ENST00000399434 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
TNRC18-202ENST00000399434 DISP1Q96F81 1524 aa25.96■■□□□ 1.75
TNRC18-202ENST00000399434 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
TNRC18-202ENST00000399434 FHOD3Q2V2M9 1422 aa25.91■■□□□ 1.74
TNRC18-202ENST00000399434 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
TNRC18-202ENST00000399434 ERCC6L2Q5T890 1561 aa25.84■■□□□ 1.73
TNRC18-202ENST00000399434 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
TNRC18-202ENST00000399434 P3H3Q8IVL6 736 aa25.83■■□□□ 1.73
TNRC18-202ENST00000399434 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
TNRC18-202ENST00000399434 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
TNRC18-202ENST00000399434 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
TNRC18-202ENST00000399434 CARMIL2Q6F5E8 1435 aa25.75■■□□□ 1.71
TNRC18-202ENST00000399434 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
TNRC18-202ENST00000399434 LRRIQ1Q96JM4 1722 aa25.7■■□□□ 1.7
TNRC18-202ENST00000399434 FYCO1Q9BQS8 1478 aa25.67■■□□□ 1.7
TNRC18-202ENST00000399434 CASKIN1Q8WXD9 1431 aa25.65■■□□□ 1.7
TNRC18-202ENST00000399434 RAPGEF6Q8TEU7 1601 aa25.63■■□□□ 1.69
TNRC18-202ENST00000399434 CFAP43Q8NDM7 1665 aa25.62■■□□□ 1.69
TNRC18-202ENST00000399434 ABCA8O94911 1581 aa25.61■■□□□ 1.69
TNRC18-202ENST00000399434 HECW1Q76N89 1606 aa25.6■■□□□ 1.69
TNRC18-202ENST00000399434 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
TNRC18-202ENST00000399434 PLB1Q6P1J6 1458 aa25.58■■□□□ 1.69
TNRC18-202ENST00000399434 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
TNRC18-202ENST00000399434 PTPRGP23470 1445 aa25.55■■□□□ 1.68
TNRC18-202ENST00000399434 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
TNRC18-202ENST00000399434 NUP153P49790 1475 aaKnown RBP25.54■■□□□ 1.68
TNRC18-202ENST00000399434 TTBK1Q5TCY1 1321 aaPredicted RBP25.54■■□□□ 1.68
TNRC18-202ENST00000399434 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
TNRC18-202ENST00000399434 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
TNRC18-202ENST00000399434 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
TNRC18-202ENST00000399434 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
TNRC18-202ENST00000399434 EPRSP07814 1512 aaKnown RBP25.48■■□□□ 1.67
TNRC18-202ENST00000399434 CDK13Q14004 1512 aaKnown RBP25.48■■□□□ 1.67
TNRC18-202ENST00000399434 ABCC2Q92887 1545 aa25.46■■□□□ 1.67
TNRC18-202ENST00000399434 CCDC18Q5T9S5 1454 aa25.45■■□□□ 1.66
TNRC18-202ENST00000399434 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
TNRC18-202ENST00000399434 ADCY10Q96PN6 1610 aa25.43■■□□□ 1.66
TNRC18-202ENST00000399434 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
TNRC18-202ENST00000399434 MAGI3Q5TCQ9 1506 aa25.4■■□□□ 1.66
TNRC18-202ENST00000399434 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
TNRC18-202ENST00000399434 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.65
TNRC18-202ENST00000399434 LRRC9Q6ZRR7 1453 aa25.37■■□□□ 1.65
TNRC18-202ENST00000399434 KANK4Q5T7N3 995 aaPredicted RBP25.37■■□□□ 1.65
TNRC18-202ENST00000399434 ATP10BO94823 1461 aa25.35■■□□□ 1.65
TNRC18-202ENST00000399434 APLP2Q06481 763 aa25.34■■□□□ 1.65
TNRC18-202ENST00000399434 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
TNRC18-202ENST00000399434 ARID3CA6NKF2 412 aa25.33■■□□□ 1.65
TNRC18-202ENST00000399434 EHBP1L1Q8N3D4 1523 aa25.32■■□□□ 1.64
TNRC18-202ENST00000399434 KDM5BQ9UGL1 1544 aa25.3■■□□□ 1.64
TNRC18-202ENST00000399434 SUPT6HQ7KZ85 1726 aaKnown RBP25.22■■□□□ 1.63
TNRC18-202ENST00000399434 MTUS2Q5JR59 1369 aa25.21■■□□□ 1.63
TNRC18-202ENST00000399434 KIF14Q15058 1648 aa25.2■■□□□ 1.63
TNRC18-202ENST00000399434 TROQ12816 1431 aaPredicted RBP25.19■■□□□ 1.62
TNRC18-202ENST00000399434 NCOA2Q15596 1464 aa25.16■■□□□ 1.62
TNRC18-202ENST00000399434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.14■■□□□ 1.61
TNRC18-202ENST00000399434 HNRNPUL2Q1KMD3 747 aaKnown RBP25.14■■□□□ 1.61
TNRC18-202ENST00000399434 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
TNRC18-202ENST00000399434 PHLDB1Q86UU1 1377 aa25.11■■□□□ 1.61
TNRC18-202ENST00000399434 CDK11AQ9UQ88 783 aaPredicted RBP25.08■■□□□ 1.6
TNRC18-202ENST00000399434 ABCC10Q5T3U5 1492 aa25.07■■□□□ 1.6
TNRC18-202ENST00000399434 WDR7Q9Y4E6 1490 aa25.05■■□□□ 1.6
TNRC18-202ENST00000399434 TTC37Q6PGP7 1564 aa25.04■■□□□ 1.6
TNRC18-202ENST00000399434 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
TNRC18-202ENST00000399434 CDC42BPAQ5VT25 1732 aa25.04■■□□□ 1.6
TNRC18-202ENST00000399434 ASXL2Q76L83 1435 aa25.04■■□□□ 1.6
TNRC18-202ENST00000399434 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
TNRC18-202ENST00000399434 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
TNRC18-202ENST00000399434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.01■■□□□ 1.595e-7■■■□□ 15.2
TNRC18-202ENST00000399434 ITSN2Q9NZM3 1697 aa25.01■■□□□ 1.59
TNRC18-202ENST00000399434 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
TNRC18-202ENST00000399434 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
TNRC18-202ENST00000399434 FGD6Q6ZV73 1430 aa24.97■■□□□ 1.59
TNRC18-202ENST00000399434 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
TNRC18-202ENST00000399434 GPATCH8Q9UKJ3 1502 aaKnown RBP24.95■■□□□ 1.58
TNRC18-202ENST00000399434 ABCA9Q8IUA7 1624 aa24.95■■□□□ 1.58
TNRC18-202ENST00000399434 MYO5CQ9NQX4 1742 aa24.94■■□□□ 1.58
TNRC18-202ENST00000399434 CDC42BPBQ9Y5S2 1711 aa24.94■■□□□ 1.58
TNRC18-202ENST00000399434 PTPN23Q9H3S7 1636 aa24.93■■□□□ 1.58
TNRC18-202ENST00000399434 NPM1P06748 294 aaKnown RBP eCLIP24.92■■□□□ 1.58
TNRC18-202ENST00000399434 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
TNRC18-202ENST00000399434 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.57
TNRC18-202ENST00000399434 MIA2Q96PC5 1412 aa24.87■■□□□ 1.57
TNRC18-202ENST00000399434 KCNH8Q96L42 1107 aa24.87■■□□□ 1.57
TNRC18-202ENST00000399434 DIP2BQ9P265 1576 aa24.85■■□□□ 1.57
TNRC18-202ENST00000399434 PCGF6Q9BYE7 350 aa24.83■■□□□ 1.57
TNRC18-202ENST00000399434 GLI2P10070 1586 aa24.81■■□□□ 1.56
TNRC18-202ENST00000399434 SAMD9LQ8IVG5 1584 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms