RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ARHGAP35Q9NRY4 1499 aa37.8■■■■□ 3.64
COL13A1-203ENST00000398969 RRBP1Q9P2E9 1410 aaKnown RBP37.79■■■■□ 3.64
COL13A1-203ENST00000398969 DHX57Q6P158 1386 aaKnown RBP37.79■■■■□ 3.64
COL13A1-203ENST00000398969 MIER1Q8N108 512 aa37.76■■■■□ 3.63
COL13A1-203ENST00000398969 MRC2Q9UBG0 1479 aa37.72■■■■□ 3.63
COL13A1-203ENST00000398969 TDRD9Q8NDG6 1382 aaKnown RBP37.67■■■■□ 3.62
COL13A1-203ENST00000398969 ABCA5Q8WWZ7 1642 aa37.67■■■■□ 3.62
COL13A1-203ENST00000398969 CUL7Q14999 1698 aa37.66■■■■□ 3.62
COL13A1-203ENST00000398969 TARBP1Q13395 1621 aaKnown RBP37.64■■■■□ 3.62
COL13A1-203ENST00000398969 YTHDC1Q96MU7 727 aaKnown RBP37.63■■■■□ 3.61
COL13A1-203ENST00000398969 GAPVD1Q14C86 1478 aa37.61■■■■□ 3.61
COL13A1-203ENST00000398969 CCNB3Q8WWL7 1395 aa37.58■■■■□ 3.61
COL13A1-203ENST00000398969 WDR62O43379 1518 aa37.49■■■■□ 3.59
COL13A1-203ENST00000398969 MAP3K1Q13233 1512 aa37.46■■■■□ 3.59
COL13A1-203ENST00000398969 TIAM1Q13009 1591 aa37.45■■■■□ 3.59
COL13A1-203ENST00000398969 ERCC6Q03468 1493 aa37.43■■■■□ 3.58
COL13A1-203ENST00000398969 IFT140Q96RY7 1462 aa37.34■■■■□ 3.57
COL13A1-203ENST00000398969 AQRO60306 1485 aaKnown RBP eCLIP37.34■■■■□ 3.57
COL13A1-203ENST00000398969 CTTNBP2Q8WZ74 1663 aa37.33■■■■□ 3.57
COL13A1-203ENST00000398969 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
COL13A1-203ENST00000398969 ITGAEP38570 1179 aa37.29■■■■□ 3.56
COL13A1-203ENST00000398969 LRRC9Q6ZRR7 1453 aa37.28■■■■□ 3.56
COL13A1-203ENST00000398969 THOC2Q8NI27 1593 aaKnown RBP37.27■■■■□ 3.56
COL13A1-203ENST00000398969 RAB3GAP2Q9H2M9 1393 aa37.24■■■■□ 3.55
COL13A1-203ENST00000398969 FHAD1B1AJZ9 1412 aa37.22■■■■□ 3.55
COL13A1-203ENST00000398969 ZNF608Q9ULD9 1512 aaPredicted RBP37.21■■■■□ 3.55
COL13A1-203ENST00000398969 GRIN2BQ13224 1484 aa37.21■■■■□ 3.55
COL13A1-203ENST00000398969 EFCAB5A4FU69 1503 aa37.19■■■■□ 3.54
COL13A1-203ENST00000398969 CFAP43Q8NDM7 1665 aa37.19■■■■□ 3.54
COL13A1-203ENST00000398969 MAPKBP1O60336 1514 aa37.16■■■■□ 3.54
COL13A1-203ENST00000398969 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
COL13A1-203ENST00000398969 PHLDB1Q86UU1 1377 aa37.16■■■■□ 3.54
COL13A1-203ENST00000398969 P3H3Q8IVL6 736 aa37.15■■■■□ 3.54
COL13A1-203ENST00000398969 ADAMTS12P58397 1594 aa37.13■■■■□ 3.54
COL13A1-203ENST00000398969 SETD5Q9C0A6 1442 aa37.11■■■■□ 3.53
COL13A1-203ENST00000398969 FHOD3Q2V2M9 1422 aa37.1■■■■□ 3.53
COL13A1-203ENST00000398969 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
COL13A1-203ENST00000398969 SAMD9Q5K651 1589 aa36.99■■■■□ 3.51
COL13A1-203ENST00000398969 FYCO1Q9BQS8 1478 aa36.99■■■■□ 3.51
COL13A1-203ENST00000398969 FAM50AQ14320 339 aaKnown RBP36.96■■■■□ 3.51
COL13A1-203ENST00000398969 CASKIN1Q8WXD9 1431 aa36.93■■■■□ 3.5
COL13A1-203ENST00000398969 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
COL13A1-203ENST00000398969 FMN1Q68DA7 1419 aa36.91■■■■□ 3.5
COL13A1-203ENST00000398969 ATP1B4Q9UN42 357 aaPredicted RBP36.89■■■■□ 3.5
COL13A1-203ENST00000398969 IQGAP2Q13576 1575 aa36.86■■■■□ 3.49
COL13A1-203ENST00000398969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.82■■■■□ 3.49
COL13A1-203ENST00000398969 MAGI1Q96QZ7 1491 aaPredicted RBP36.8■■■■□ 3.48
COL13A1-203ENST00000398969 GRIN2AQ12879 1464 aa36.78■■■■□ 3.48
COL13A1-203ENST00000398969 SIN3AQ96ST3 1273 aa36.76■■■■□ 3.48
COL13A1-203ENST00000398969 KIAA0586Q9BVV6 1533 aa36.71■■■■□ 3.47
COL13A1-203ENST00000398969 SYNJ2O15056 1496 aa36.69■■■■□ 3.46
COL13A1-203ENST00000398969 TIMELESSQ9UNS1 1208 aa36.69■■■■□ 3.46
COL13A1-203ENST00000398969 UGGT2Q9NYU1 1516 aa36.68■■■■□ 3.46
COL13A1-203ENST00000398969 FGD6Q6ZV73 1430 aa36.67■■■■□ 3.46
COL13A1-203ENST00000398969 CHMP7Q8WUX9 453 aaPredicted RBP36.65■■■■□ 3.46
COL13A1-203ENST00000398969 LRRIQ1Q96JM4 1722 aa36.57■■■■□ 3.45
COL13A1-203ENST00000398969 SUPT16HQ9Y5B9 1047 aaKnown RBP36.57■■■■□ 3.44
COL13A1-203ENST00000398969 MTUS2Q5JR59 1369 aa36.56■■■■□ 3.44
COL13A1-203ENST00000398969 FBLN2P98095 1184 aa36.54■■■■□ 3.44
COL13A1-203ENST00000398969 CEP170Q5SW79 1584 aa36.54■■■■□ 3.44
COL13A1-203ENST00000398969 KCNH8Q96L42 1107 aa36.52■■■■□ 3.44
COL13A1-203ENST00000398969 DISP1Q96F81 1524 aa36.51■■■■□ 3.43
COL13A1-203ENST00000398969 PPP1R15AO75807 674 aaPredicted RBP36.5■■■■□ 3.43
COL13A1-203ENST00000398969 CCDC18Q5T9S5 1454 aa36.49■■■■□ 3.43
COL13A1-203ENST00000398969 KIAA0556O60303 1618 aa36.48■■■■□ 3.43
COL13A1-203ENST00000398969 DDX10Q13206 875 aaKnown RBP36.48■■■■□ 3.43
COL13A1-203ENST00000398969 HFM1A2PYH4 1435 aa36.48■■■■□ 3.43
COL13A1-203ENST00000398969 PTPRKQ15262 1439 aa36.47■■■■□ 3.43
COL13A1-203ENST00000398969 NUP160Q12769 1436 aa36.47■■■■□ 3.43
COL13A1-203ENST00000398969 NCOA2Q15596 1464 aa36.45■■■■□ 3.43
COL13A1-203ENST00000398969 PTPN23Q9H3S7 1636 aa36.44■■■■□ 3.42
COL13A1-203ENST00000398969 HECW1Q76N89 1606 aa36.43■■■■□ 3.42
COL13A1-203ENST00000398969 MYOM3Q5VTT5 1437 aa36.43■■■■□ 3.42
COL13A1-203ENST00000398969 UACAQ9BZF9 1416 aa36.41■■■■□ 3.42
COL13A1-203ENST00000398969 SUPT6HQ7KZ85 1726 aaKnown RBP36.4■■■■□ 3.42
COL13A1-203ENST00000398969 EHBP1L1Q8N3D4 1523 aa36.39■■■■□ 3.42
COL13A1-203ENST00000398969 EPRSP07814 1512 aaKnown RBP36.34■■■■□ 3.41
COL13A1-203ENST00000398969 NAIPQ13075 1403 aa36.34■■■■□ 3.41
COL13A1-203ENST00000398969 TONSLQ96HA7 1378 aa36.34■■■■□ 3.41
COL13A1-203ENST00000398969 JPH4Q96JJ6 628 aa36.29■■■■□ 3.4
COL13A1-203ENST00000398969 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
COL13A1-203ENST00000398969 HIRIP3Q9BW71 556 aaPredicted RBP36.29■■■■□ 3.4
COL13A1-203ENST00000398969 MAGI3Q5TCQ9 1506 aa36.29■■■■□ 3.4
COL13A1-203ENST00000398969 CDK13Q14004 1512 aaKnown RBP36.24■■■■□ 3.39
COL13A1-203ENST00000398969 MYT1Q01538 1121 aa36.22■■■■□ 3.39
COL13A1-203ENST00000398969 CARMIL2Q6F5E8 1435 aa36.22■■■■□ 3.39
COL13A1-203ENST00000398969 RAPGEF6Q8TEU7 1601 aa36.19■■■■□ 3.38
COL13A1-203ENST00000398969 CCER2I3L3R5 266 aa36.18■■■■□ 3.38
COL13A1-203ENST00000398969 NUP153P49790 1475 aaKnown RBP36.17■■■■□ 3.38
COL13A1-203ENST00000398969 ARID3CA6NKF2 412 aa36.16■■■■□ 3.38
COL13A1-203ENST00000398969 TCOF1Q13428 1488 aaKnown RBP36.16■■■■□ 3.38
COL13A1-203ENST00000398969 ANP32CO43423 234 aa36.13■■■■□ 3.37
COL13A1-203ENST00000398969 CHD1O14646 1710 aa36.13■■■■□ 3.37
COL13A1-203ENST00000398969 KDM5BQ9UGL1 1544 aa36.12■■■■□ 3.37
COL13A1-203ENST00000398969 GCC2Q8IWJ2 1684 aa36.1■■■■□ 3.37
COL13A1-203ENST00000398969 PLB1Q6P1J6 1458 aa36.07■■■■□ 3.36
COL13A1-203ENST00000398969 AKNAQ7Z591 1439 aa36.03■■■■□ 3.36
COL13A1-203ENST00000398969 RRP7BPQ9NSQ0 103 aa36.03■■■■□ 3.36
COL13A1-203ENST00000398969 DENND4BO75064 1496 aaPredicted RBP35.98■■■■□ 3.35
COL13A1-203ENST00000398969 PRG4Q92954 1404 aaPredicted RBP35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms