RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
CAPN11-201ENST00000398776 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
CAPN11-201ENST00000398776 CLSPNQ9HAW4 1339 aa14.61□□□□□ -0.07
CAPN11-201ENST00000398776 MAP3K1Q13233 1512 aa14.6□□□□□ -0.07
CAPN11-201ENST00000398776 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
CAPN11-201ENST00000398776 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
CAPN11-201ENST00000398776 ABCA5Q8WWZ7 1642 aa14.54□□□□□ -0.08
CAPN11-201ENST00000398776 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
CAPN11-201ENST00000398776 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
CAPN11-201ENST00000398776 EFCAB5A4FU69 1503 aa14.53□□□□□ -0.08
CAPN11-201ENST00000398776 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
CAPN11-201ENST00000398776 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
CAPN11-201ENST00000398776 KANK4Q5T7N3 995 aaPredicted RBP14.52□□□□□ -0.09
CAPN11-201ENST00000398776 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
CAPN11-201ENST00000398776 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
CAPN11-201ENST00000398776 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
CAPN11-201ENST00000398776 GAPVD1Q14C86 1478 aa14.47□□□□□ -0.09
CAPN11-201ENST00000398776 CFAP43Q8NDM7 1665 aa14.47□□□□□ -0.09
CAPN11-201ENST00000398776 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
CAPN11-201ENST00000398776 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
CAPN11-201ENST00000398776 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.09
CAPN11-201ENST00000398776 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
CAPN11-201ENST00000398776 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
CAPN11-201ENST00000398776 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
CAPN11-201ENST00000398776 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
CAPN11-201ENST00000398776 SUPT16HQ9Y5B9 1047 aaKnown RBP14.43□□□□□ -0.1
CAPN11-201ENST00000398776 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
CAPN11-201ENST00000398776 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
CAPN11-201ENST00000398776 MRC2Q9UBG0 1479 aa14.4□□□□□ -0.1
CAPN11-201ENST00000398776 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
CAPN11-201ENST00000398776 FMN1Q68DA7 1419 aa14.39□□□□□ -0.11
CAPN11-201ENST00000398776 FHOD3Q2V2M9 1422 aa14.38□□□□□ -0.11
CAPN11-201ENST00000398776 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
CAPN11-201ENST00000398776 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
CAPN11-201ENST00000398776 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
CAPN11-201ENST00000398776 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
CAPN11-201ENST00000398776 WDR62O43379 1518 aa14.32□□□□□ -0.12
CAPN11-201ENST00000398776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAPN11-201ENST00000398776 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
CAPN11-201ENST00000398776 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
CAPN11-201ENST00000398776 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
CAPN11-201ENST00000398776 PHLDB1Q86UU1 1377 aa14.3□□□□□ -0.12
CAPN11-201ENST00000398776 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
CAPN11-201ENST00000398776 ERICH6Q7L0X2 663 aa14.28□□□□□ -0.12
CAPN11-201ENST00000398776 IQGAP2Q13576 1575 aa14.25□□□□□ -0.13
CAPN11-201ENST00000398776 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
CAPN11-201ENST00000398776 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
CAPN11-201ENST00000398776 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
CAPN11-201ENST00000398776 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
CAPN11-201ENST00000398776 CCDC18Q5T9S5 1454 aa14.22□□□□□ -0.13
CAPN11-201ENST00000398776 EHBP1L1Q8N3D4 1523 aa14.2□□□□□ -0.14
CAPN11-201ENST00000398776 UGGT2Q9NYU1 1516 aa14.2□□□□□ -0.14
CAPN11-201ENST00000398776 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
CAPN11-201ENST00000398776 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
CAPN11-201ENST00000398776 FGD6Q6ZV73 1430 aa14.19□□□□□ -0.14
CAPN11-201ENST00000398776 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
CAPN11-201ENST00000398776 ITGAEP38570 1179 aa14.18□□□□□ -0.14
CAPN11-201ENST00000398776 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
CAPN11-201ENST00000398776 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
CAPN11-201ENST00000398776 BCANQ96GW7 911 aa14.17□□□□□ -0.14
CAPN11-201ENST00000398776 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
CAPN11-201ENST00000398776 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
CAPN11-201ENST00000398776 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
CAPN11-201ENST00000398776 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
CAPN11-201ENST00000398776 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
CAPN11-201ENST00000398776 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
CAPN11-201ENST00000398776 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
CAPN11-201ENST00000398776 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
CAPN11-201ENST00000398776 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
CAPN11-201ENST00000398776 EPRSP07814 1512 aaKnown RBP14.11□□□□□ -0.15
CAPN11-201ENST00000398776 KIAA0556O60303 1618 aa14.1□□□□□ -0.15
CAPN11-201ENST00000398776 MAGI3Q5TCQ9 1506 aa14.09□□□□□ -0.15
CAPN11-201ENST00000398776 PTPN23Q9H3S7 1636 aa14.09□□□□□ -0.15
CAPN11-201ENST00000398776 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.15
CAPN11-201ENST00000398776 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.15
CAPN11-201ENST00000398776 HFM1A2PYH4 1435 aa14.08□□□□□ -0.15
CAPN11-201ENST00000398776 TCOF1Q13428 1488 aaKnown RBP14.08□□□□□ -0.16
CAPN11-201ENST00000398776 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
CAPN11-201ENST00000398776 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
CAPN11-201ENST00000398776 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
CAPN11-201ENST00000398776 FKBP8Q14318 412 aa14.06□□□□□ -0.16
CAPN11-201ENST00000398776 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
CAPN11-201ENST00000398776 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
CAPN11-201ENST00000398776 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
CAPN11-201ENST00000398776 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
CAPN11-201ENST00000398776 AKNAQ7Z591 1439 aa14.02□□□□□ -0.17
CAPN11-201ENST00000398776 CDK13Q14004 1512 aaKnown RBP14.02□□□□□ -0.17
CAPN11-201ENST00000398776 UACAQ9BZF9 1416 aa14.02□□□□□ -0.17
CAPN11-201ENST00000398776 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
CAPN11-201ENST00000398776 NAIPQ13075 1403 aa14.01□□□□□ -0.17
CAPN11-201ENST00000398776 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
CAPN11-201ENST00000398776 NUP160Q12769 1436 aa14□□□□□ -0.17
CAPN11-201ENST00000398776 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
CAPN11-201ENST00000398776 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
CAPN11-201ENST00000398776 MSH5O43196 834 aa13.98□□□□□ -0.17
CAPN11-201ENST00000398776 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
CAPN11-201ENST00000398776 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.18
CAPN11-201ENST00000398776 FANCIQ9NVI1 1328 aa13.96□□□□□ -0.18
CAPN11-201ENST00000398776 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.18
CAPN11-201ENST00000398776 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms