RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 NISCHQ9Y2I1 1504 aa20.84■□□□□ 0.93
CAPN11-201ENST00000398776 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
CAPN11-201ENST00000398776 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
CAPN11-201ENST00000398776 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
CAPN11-201ENST00000398776 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
CAPN11-201ENST00000398776 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
CAPN11-201ENST00000398776 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
CAPN11-201ENST00000398776 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
CAPN11-201ENST00000398776 NACADO15069 1562 aa16.64■□□□□ 0.25
CAPN11-201ENST00000398776 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
CAPN11-201ENST00000398776 HRCP23327 699 aa16.6■□□□□ 0.25
CAPN11-201ENST00000398776 ABCC9O60706 1549 aa16.56■□□□□ 0.24
CAPN11-201ENST00000398776 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
CAPN11-201ENST00000398776 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
CAPN11-201ENST00000398776 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
CAPN11-201ENST00000398776 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
CAPN11-201ENST00000398776 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
CAPN11-201ENST00000398776 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
CAPN11-201ENST00000398776 MYT1Q01538 1121 aa16.14■□□□□ 0.17
CAPN11-201ENST00000398776 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
CAPN11-201ENST00000398776 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
CAPN11-201ENST00000398776 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
CAPN11-201ENST00000398776 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
CAPN11-201ENST00000398776 WIZO95785 1651 aa16■□□□□ 0.15
CAPN11-201ENST00000398776 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
CAPN11-201ENST00000398776 BICRAQ9NZM4 1560 aa15.88■□□□□ 0.13
CAPN11-201ENST00000398776 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
CAPN11-201ENST00000398776 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
CAPN11-201ENST00000398776 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
CAPN11-201ENST00000398776 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
CAPN11-201ENST00000398776 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
CAPN11-201ENST00000398776 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
CAPN11-201ENST00000398776 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
CAPN11-201ENST00000398776 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
CAPN11-201ENST00000398776 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
CAPN11-201ENST00000398776 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
CAPN11-201ENST00000398776 ZEB1P37275 1124 aaPredicted RBP15.59■□□□□ 0.09
CAPN11-201ENST00000398776 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
CAPN11-201ENST00000398776 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
CAPN11-201ENST00000398776 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
CAPN11-201ENST00000398776 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
CAPN11-201ENST00000398776 EEA1Q15075 1411 aa15.41■□□□□ 0.06
CAPN11-201ENST00000398776 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
CAPN11-201ENST00000398776 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
CAPN11-201ENST00000398776 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
CAPN11-201ENST00000398776 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
CAPN11-201ENST00000398776 SOGA1O94964 1423 aa15.29■□□□□ 0.04
CAPN11-201ENST00000398776 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
CAPN11-201ENST00000398776 SYNJ1O43426 1573 aa15.27■□□□□ 0.04
CAPN11-201ENST00000398776 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
CAPN11-201ENST00000398776 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
CAPN11-201ENST00000398776 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
CAPN11-201ENST00000398776 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
CAPN11-201ENST00000398776 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
CAPN11-201ENST00000398776 RUSC2Q8N2Y8 1516 aa15.2■□□□□ 0.02
CAPN11-201ENST00000398776 GOLGA3Q08378 1498 aa15.19■□□□□ 0.02
CAPN11-201ENST00000398776 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
CAPN11-201ENST00000398776 KIF21BO75037 1637 aa15.18■□□□□ 0.02
CAPN11-201ENST00000398776 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
CAPN11-201ENST00000398776 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
CAPN11-201ENST00000398776 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
CAPN11-201ENST00000398776 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
CAPN11-201ENST00000398776 CFTRP13569 1480 aa15.13■□□□□ 0.01
CAPN11-201ENST00000398776 PRDM2Q13029 1718 aa15.13■□□□□ 0.01
CAPN11-201ENST00000398776 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
CAPN11-201ENST00000398776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
CAPN11-201ENST00000398776 CUX1P39880 1505 aa15.03■□□□□ -0
CAPN11-201ENST00000398776 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
CAPN11-201ENST00000398776 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
CAPN11-201ENST00000398776 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
CAPN11-201ENST00000398776 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
CAPN11-201ENST00000398776 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
CAPN11-201ENST00000398776 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
CAPN11-201ENST00000398776 PRXQ9BXM0 1461 aa14.96□□□□□ -0.02
CAPN11-201ENST00000398776 CLIP1P30622 1438 aa14.95□□□□□ -0.02
CAPN11-201ENST00000398776 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
CAPN11-201ENST00000398776 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
CAPN11-201ENST00000398776 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
CAPN11-201ENST00000398776 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
CAPN11-201ENST00000398776 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
CAPN11-201ENST00000398776 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
CAPN11-201ENST00000398776 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
CAPN11-201ENST00000398776 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
CAPN11-201ENST00000398776 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
CAPN11-201ENST00000398776 CUX2O14529 1486 aa14.77□□□□□ -0.04
CAPN11-201ENST00000398776 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
CAPN11-201ENST00000398776 IGF1RP08069 1367 aa14.75□□□□□ -0.05
CAPN11-201ENST00000398776 APLP2Q06481 763 aa14.75□□□□□ -0.05
CAPN11-201ENST00000398776 ARAP1Q96P48 1450 aa14.75□□□□□ -0.05
CAPN11-201ENST00000398776 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
CAPN11-201ENST00000398776 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
CAPN11-201ENST00000398776 ZNF316A6NFI3 1004 aaPredicted RBP14.69□□□□□ -0.06
CAPN11-201ENST00000398776 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
CAPN11-201ENST00000398776 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
CAPN11-201ENST00000398776 NESP48681 1621 aa14.67□□□□□ -0.06
CAPN11-201ENST00000398776 ARHGAP35Q9NRY4 1499 aa14.67□□□□□ -0.06
CAPN11-201ENST00000398776 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
CAPN11-201ENST00000398776 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
CAPN11-201ENST00000398776 CUL7Q14999 1698 aa14.63□□□□□ -0.07
CAPN11-201ENST00000398776 MIER1Q8N108 512 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms