RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
PPME1-202ENST00000398427 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
PPME1-202ENST00000398427 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
PPME1-202ENST00000398427 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
PPME1-202ENST00000398427 IQGAP2Q13576 1575 aa18.54■□□□□ 0.56
PPME1-202ENST00000398427 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
PPME1-202ENST00000398427 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
PPME1-202ENST00000398427 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
PPME1-202ENST00000398427 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
PPME1-202ENST00000398427 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
PPME1-202ENST00000398427 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
PPME1-202ENST00000398427 SAMD9Q5K651 1589 aa18.39■□□□□ 0.53
PPME1-202ENST00000398427 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
PPME1-202ENST00000398427 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
PPME1-202ENST00000398427 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
PPME1-202ENST00000398427 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
PPME1-202ENST00000398427 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
PPME1-202ENST00000398427 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
PPME1-202ENST00000398427 CLIP1P30622 1438 aa18.35■□□□□ 0.53
PPME1-202ENST00000398427 CARMIL2Q6F5E8 1435 aa18.33■□□□□ 0.52
PPME1-202ENST00000398427 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
PPME1-202ENST00000398427 P3H3Q8IVL6 736 aa18.3■□□□□ 0.52
PPME1-202ENST00000398427 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
PPME1-202ENST00000398427 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
PPME1-202ENST00000398427 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
PPME1-202ENST00000398427 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
PPME1-202ENST00000398427 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
PPME1-202ENST00000398427 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
PPME1-202ENST00000398427 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.5
PPME1-202ENST00000398427 PTPRGP23470 1445 aa18.2■□□□□ 0.5
PPME1-202ENST00000398427 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
PPME1-202ENST00000398427 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
PPME1-202ENST00000398427 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
PPME1-202ENST00000398427 ABCA8O94911 1581 aa18.13■□□□□ 0.49
PPME1-202ENST00000398427 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
PPME1-202ENST00000398427 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
PPME1-202ENST00000398427 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
PPME1-202ENST00000398427 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
PPME1-202ENST00000398427 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
PPME1-202ENST00000398427 ADCY10Q96PN6 1610 aa18.08■□□□□ 0.49
PPME1-202ENST00000398427 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.49
PPME1-202ENST00000398427 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
PPME1-202ENST00000398427 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
PPME1-202ENST00000398427 UHRF1BP1LA0JNW5 1464 aa18.06■□□□□ 0.48
PPME1-202ENST00000398427 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
PPME1-202ENST00000398427 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
PPME1-202ENST00000398427 LRRIQ1Q96JM4 1722 aa18.05■□□□□ 0.48
PPME1-202ENST00000398427 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.48
PPME1-202ENST00000398427 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
PPME1-202ENST00000398427 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
PPME1-202ENST00000398427 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
PPME1-202ENST00000398427 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
PPME1-202ENST00000398427 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
PPME1-202ENST00000398427 ATP10BO94823 1461 aa17.98■□□□□ 0.47
PPME1-202ENST00000398427 CCDC18Q5T9S5 1454 aa17.96■□□□□ 0.47
PPME1-202ENST00000398427 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
PPME1-202ENST00000398427 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
PPME1-202ENST00000398427 MAP3K1Q13233 1512 aa17.9■□□□□ 0.46
PPME1-202ENST00000398427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
PPME1-202ENST00000398427 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
PPME1-202ENST00000398427 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
PPME1-202ENST00000398427 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
PPME1-202ENST00000398427 HRCP23327 699 aa17.87■□□□□ 0.45
PPME1-202ENST00000398427 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
PPME1-202ENST00000398427 APLP2Q06481 763 aa17.86■□□□□ 0.45
PPME1-202ENST00000398427 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
PPME1-202ENST00000398427 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
PPME1-202ENST00000398427 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.45
PPME1-202ENST00000398427 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.44
PPME1-202ENST00000398427 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
PPME1-202ENST00000398427 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
PPME1-202ENST00000398427 TROQ12816 1431 aaPredicted RBP17.81■□□□□ 0.44
PPME1-202ENST00000398427 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
PPME1-202ENST00000398427 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
PPME1-202ENST00000398427 KIF14Q15058 1648 aa17.79■□□□□ 0.44
PPME1-202ENST00000398427 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
PPME1-202ENST00000398427 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
PPME1-202ENST00000398427 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
PPME1-202ENST00000398427 DIP2BQ9P265 1576 aa17.73■□□□□ 0.43
PPME1-202ENST00000398427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
PPME1-202ENST00000398427 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
PPME1-202ENST00000398427 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
PPME1-202ENST00000398427 ABCC10Q5T3U5 1492 aa17.71■□□□□ 0.43
PPME1-202ENST00000398427 ABCA9Q8IUA7 1624 aa17.7■□□□□ 0.42
PPME1-202ENST00000398427 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
PPME1-202ENST00000398427 GLI2P10070 1586 aa17.69■□□□□ 0.42
PPME1-202ENST00000398427 MYT1Q01538 1121 aa17.68■□□□□ 0.42
PPME1-202ENST00000398427 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
PPME1-202ENST00000398427 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
PPME1-202ENST00000398427 MAP3K4Q9Y6R4 1608 aa17.65■□□□□ 0.42
PPME1-202ENST00000398427 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
PPME1-202ENST00000398427 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.42
PPME1-202ENST00000398427 PREX2Q70Z35 1606 aa17.63■□□□□ 0.41
PPME1-202ENST00000398427 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
PPME1-202ENST00000398427 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
PPME1-202ENST00000398427 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
PPME1-202ENST00000398427 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
PPME1-202ENST00000398427 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
PPME1-202ENST00000398427 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
PPME1-202ENST00000398427 PLCH2O75038 1416 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms