RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 KDM2AQ9Y2K7 1162 aa6.61□□□□□ -1.35
UBE3A-202ENST00000397954 GRIN2BQ13224 1484 aa6.6□□□□□ -1.35
UBE3A-202ENST00000397954 MYCNP04198 464 aaPredicted RBP6.6□□□□□ -1.35
UBE3A-202ENST00000397954 FBLN2P98095 1184 aa6.59□□□□□ -1.35
UBE3A-202ENST00000397954 WRNQ14191 1432 aaPredicted RBP eCLIP6.59□□□□□ -1.355e-6■■■■■ 29.2
UBE3A-202ENST00000397954 FGD5Q6ZNL6 1462 aa6.59□□□□□ -1.36
UBE3A-202ENST00000397954 CHD1O14646 1710 aa6.59□□□□□ -1.36
UBE3A-202ENST00000397954 TULP1O00294 542 aaPredicted RBP6.58□□□□□ -1.36
UBE3A-202ENST00000397954 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
UBE3A-202ENST00000397954 VSIG10Q8N0Z9 540 aa6.58□□□□□ -1.36
UBE3A-202ENST00000397954 ATF5Q9Y2D1 282 aaPredicted RBP6.58□□□□□ -1.36
UBE3A-202ENST00000397954 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
UBE3A-202ENST00000397954 CLASP1Q7Z460 1538 aa6.57□□□□□ -1.36
UBE3A-202ENST00000397954 SYNJ2O15056 1496 aa6.57□□□□□ -1.36
UBE3A-202ENST00000397954 SHROOM2Q13796 1616 aa6.57□□□□□ -1.36
UBE3A-202ENST00000397954 SOGA1O94964 1423 aa6.55□□□□□ -1.36
UBE3A-202ENST00000397954 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
UBE3A-202ENST00000397954 EEA1Q15075 1411 aa6.53□□□□□ -1.36
UBE3A-202ENST00000397954 DNAJC5Q9H3Z4 198 aa6.52□□□□□ -1.37
UBE3A-202ENST00000397954 FHAD1B1AJZ9 1412 aa6.52□□□□□ -1.37
UBE3A-202ENST00000397954 NUP160Q12769 1436 aa6.5□□□□□ -1.37
UBE3A-202ENST00000397954 CTTNBP2Q8WZ74 1663 aa6.49□□□□□ -1.37
UBE3A-202ENST00000397954 PKD2Q13563 968 aa6.49□□□□□ -1.37
UBE3A-202ENST00000397954 SNAPC4Q5SXM2 1469 aa6.49□□□□□ -1.37
UBE3A-202ENST00000397954 KIF27Q86VH2 1401 aa6.48□□□□□ -1.37
UBE3A-202ENST00000397954 GRIN2AQ12879 1464 aa6.48□□□□□ -1.37
UBE3A-202ENST00000397954 RUSC2Q8N2Y8 1516 aa6.48□□□□□ -1.37
UBE3A-202ENST00000397954 ZNF608Q9ULD9 1512 aaPredicted RBP6.47□□□□□ -1.37
UBE3A-202ENST00000397954 RIMBP3CA6NJZ7 1639 aa6.47□□□□□ -1.37
UBE3A-202ENST00000397954 RIMBP3BA6NNM3 1639 aa6.47□□□□□ -1.37
UBE3A-202ENST00000397954 RIMBP3Q9UFD9 1639 aa6.47□□□□□ -1.37
UBE3A-202ENST00000397954 IFNLR1Q8IU57 520 aaPredicted RBP6.47□□□□□ -1.37
UBE3A-202ENST00000397954 HOXD11P31277 338 aaPredicted RBP6.47□□□□□ -1.37
UBE3A-202ENST00000397954 OSCARQ8IYS5 282 aa6.45□□□□□ -1.38
UBE3A-202ENST00000397954 VASPP50552 380 aaPredicted RBP6.44□□□□□ -1.38
UBE3A-202ENST00000397954 ARXQ96QS3 562 aa6.44□□□□□ -1.38
UBE3A-202ENST00000397954 PAXIP1Q6ZW49 1069 aaPredicted RBP6.44□□□□□ -1.38
UBE3A-202ENST00000397954 RAD54L2Q9Y4B4 1467 aa6.44□□□□□ -1.38
UBE3A-202ENST00000397954 ARHGEF11O15085 1522 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 NPM1P06748 294 aaKnown RBP eCLIP6.43□□□□□ -1.38
UBE3A-202ENST00000397954 CFAP44Q96MT7 982 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 KIF21BO75037 1637 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 CEP170Q5SW79 1584 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 FBXO3Q9UK99 471 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 GTF3C3Q9Y5Q9 886 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 KIAA0586Q9BVV6 1533 aa6.43□□□□□ -1.38
UBE3A-202ENST00000397954 UGGT2Q9NYU1 1516 aa6.42□□□□□ -1.38
UBE3A-202ENST00000397954 AQRO60306 1485 aaKnown RBP eCLIP6.41□□□□□ -1.382e-7■■■■□ 21.4
UBE3A-202ENST00000397954 GOLGA3Q08378 1498 aa6.41□□□□□ -1.38
UBE3A-202ENST00000397954 IQGAP2Q13576 1575 aa6.4□□□□□ -1.38
UBE3A-202ENST00000397954 UHRF1BP1LA0JNW5 1464 aa6.4□□□□□ -1.39
UBE3A-202ENST00000397954 TSHZ2Q9NRE2 1034 aa6.39□□□□□ -1.39
UBE3A-202ENST00000397954 EFCAB5A4FU69 1503 aa6.39□□□□□ -1.39
UBE3A-202ENST00000397954 MAPKBP1O60336 1514 aa6.39□□□□□ -1.39
UBE3A-202ENST00000397954 RAPGEF2Q9Y4G8 1499 aa6.38□□□□□ -1.39
UBE3A-202ENST00000397954 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.37□□□□□ -1.39
UBE3A-202ENST00000397954 PRXQ9BXM0 1461 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 DMRT2Q9Y5R5 561 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 GLI2P10070 1586 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 SAMD9Q5K651 1589 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 CARMIL2Q6F5E8 1435 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 SPDYE4A6NLX3 237 aa6.36□□□□□ -1.39
UBE3A-202ENST00000397954 BBXQ8WY36 941 aaPredicted RBP6.36□□□□□ -1.39
UBE3A-202ENST00000397954 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
UBE3A-202ENST00000397954 KIAA0556O60303 1618 aa6.35□□□□□ -1.39
UBE3A-202ENST00000397954 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
UBE3A-202ENST00000397954 IGF1RP08069 1367 aa6.35□□□□□ -1.39
UBE3A-202ENST00000397954 ARAP1Q96P48 1450 aa6.34□□□□□ -1.39
UBE3A-202ENST00000397954 CHMP7Q8WUX9 453 aaPredicted RBP6.34□□□□□ -1.39
UBE3A-202ENST00000397954 CARMIL1Q5VZK9 1371 aa6.32□□□□□ -1.4
UBE3A-202ENST00000397954 MSH5O43196 834 aa6.32□□□□□ -1.4
UBE3A-202ENST00000397954 CFAP74Q9C0B2 1584 aa6.31□□□□□ -1.4
UBE3A-202ENST00000397954 CFAP43Q8NDM7 1665 aa6.31□□□□□ -1.4
UBE3A-202ENST00000397954 ABCC2Q92887 1545 aa6.3□□□□□ -1.4
UBE3A-202ENST00000397954 PROM2Q8N271 834 aa6.3□□□□□ -1.4
UBE3A-202ENST00000397954 TMEM132AQ24JP5 1023 aa6.3□□□□□ -1.4
UBE3A-202ENST00000397954 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
UBE3A-202ENST00000397954 TNIKQ9UKE5 1360 aa6.29□□□□□ -1.4
UBE3A-202ENST00000397954 ABCA8O94911 1581 aa6.29□□□□□ -1.4
UBE3A-202ENST00000397954 NBR1Q14596 966 aa6.28□□□□□ -1.4
UBE3A-202ENST00000397954 KIF13AQ9H1H9 1805 aa6.28□□□□□ -1.4
UBE3A-202ENST00000397954 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
UBE3A-202ENST00000397954 PLB1Q6P1J6 1458 aa6.28□□□□□ -1.4
UBE3A-202ENST00000397954 KDM5BQ9UGL1 1544 aa6.28□□□□□ -1.4
UBE3A-202ENST00000397954 ADCY10Q96PN6 1610 aa6.28□□□□□ -1.4
UBE3A-202ENST00000397954 ECM2O94769 699 aaPredicted RBP6.28□□□□□ -1.4
UBE3A-202ENST00000397954 RGL2O15211 777 aa6.27□□□□□ -1.41
UBE3A-202ENST00000397954 MKRN4PQ13434 485 aaPredicted RBP6.27□□□□□ -1.41
UBE3A-202ENST00000397954 SPRYD3Q8NCJ5 442 aa6.27□□□□□ -1.41
UBE3A-202ENST00000397954 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
UBE3A-202ENST00000397954 ARAP3Q8WWN8 1544 aa6.27□□□□□ -1.41
UBE3A-202ENST00000397954 DISP1Q96F81 1524 aa6.27□□□□□ -1.41
UBE3A-202ENST00000397954 PRG4Q92954 1404 aaPredicted RBP6.27□□□□□ -1.41
UBE3A-202ENST00000397954 MAP3K4Q9Y6R4 1608 aa6.26□□□□□ -1.41
UBE3A-202ENST00000397954 DIP2BQ9P265 1576 aa6.26□□□□□ -1.41
UBE3A-202ENST00000397954 RAPGEF6Q8TEU7 1601 aa6.25□□□□□ -1.41
UBE3A-202ENST00000397954 ZCCHC11Q5TAX3 1644 aaKnown RBP6.25□□□□□ -1.41
UBE3A-202ENST00000397954 HECW1Q76N89 1606 aa6.25□□□□□ -1.41
UBE3A-202ENST00000397954 ZNF219Q9P2Y4 722 aaPredicted RBP6.24□□□□□ -1.41
UBE3A-202ENST00000397954 TEX14Q8IWB6 1497 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms