RNA–Protein interactions for RNA: ENST00000397932.6

TRPM2-204, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM2, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-204ENST00000397932 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
TRPM2-204ENST00000397932 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
TRPM2-204ENST00000397932 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
TRPM2-204ENST00000397932 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
TRPM2-204ENST00000397932 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
TRPM2-204ENST00000397932 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
TRPM2-204ENST00000397932 IRX6P78412 446 aaPredicted RBP18.58■□□□□ 0.57
TRPM2-204ENST00000397932 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.56
TRPM2-204ENST00000397932 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
TRPM2-204ENST00000397932 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
TRPM2-204ENST00000397932 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
TRPM2-204ENST00000397932 HIRIP3Q9BW71 556 aaPredicted RBP18.55■□□□□ 0.56
TRPM2-204ENST00000397932 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
TRPM2-204ENST00000397932 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
TRPM2-204ENST00000397932 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
TRPM2-204ENST00000397932 FBLN2P98095 1184 aa18.53■□□□□ 0.56
TRPM2-204ENST00000397932 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRPM2-204ENST00000397932 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
TRPM2-204ENST00000397932 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
TRPM2-204ENST00000397932 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
TRPM2-204ENST00000397932 AMER1Q5JTC6 1135 aaPredicted RBP18.48■□□□□ 0.55
TRPM2-204ENST00000397932 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
TRPM2-204ENST00000397932 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
TRPM2-204ENST00000397932 WIZO95785 1651 aa18.43■□□□□ 0.54
TRPM2-204ENST00000397932 BECN1Q14457 450 aa18.43■□□□□ 0.54
TRPM2-204ENST00000397932 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
TRPM2-204ENST00000397932 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
TRPM2-204ENST00000397932 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
TRPM2-204ENST00000397932 DNTTIP2Q5QJE6 756 aaKnown RBP18.41■□□□□ 0.54
TRPM2-204ENST00000397932 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
TRPM2-204ENST00000397932 SIN3AQ96ST3 1273 aa18.39■□□□□ 0.53
TRPM2-204ENST00000397932 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
TRPM2-204ENST00000397932 PRKCSHP14314 528 aaPredicted RBP18.37■□□□□ 0.53
TRPM2-204ENST00000397932 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
TRPM2-204ENST00000397932 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
TRPM2-204ENST00000397932 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
TRPM2-204ENST00000397932 PTMAP06454 111 aaKnown RBP18.34■□□□□ 0.53
TRPM2-204ENST00000397932 SETD5Q9C0A6 1442 aa18.33■□□□□ 0.53
TRPM2-204ENST00000397932 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
TRPM2-204ENST00000397932 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
TRPM2-204ENST00000397932 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
TRPM2-204ENST00000397932 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
TRPM2-204ENST00000397932 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
TRPM2-204ENST00000397932 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
TRPM2-204ENST00000397932 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
TRPM2-204ENST00000397932 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
TRPM2-204ENST00000397932 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
TRPM2-204ENST00000397932 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
TRPM2-204ENST00000397932 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
TRPM2-204ENST00000397932 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
TRPM2-204ENST00000397932 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
TRPM2-204ENST00000397932 WDR43Q15061 677 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRPM2-204ENST00000397932 CUX2O14529 1486 aa18.22■□□□□ 0.51
TRPM2-204ENST00000397932 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
TRPM2-204ENST00000397932 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
TRPM2-204ENST00000397932 HSP90AA2PQ14568 343 aaPredicted RBP18.21■□□□□ 0.51
TRPM2-204ENST00000397932 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
TRPM2-204ENST00000397932 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
TRPM2-204ENST00000397932 MSNP26038 577 aaKnown RBP18.16■□□□□ 0.5
TRPM2-204ENST00000397932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRPM2-204ENST00000397932 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
TRPM2-204ENST00000397932 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.5
TRPM2-204ENST00000397932 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
TRPM2-204ENST00000397932 PKNOX2Q96KN3 472 aa18.12■□□□□ 0.49
TRPM2-204ENST00000397932 RUSC2Q8N2Y8 1516 aa18.11■□□□□ 0.49
TRPM2-204ENST00000397932 TNNT3P45378 269 aaPredicted RBP18.11■□□□□ 0.49
TRPM2-204ENST00000397932 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
TRPM2-204ENST00000397932 ARID3AQ99856 593 aa18.1■□□□□ 0.49
TRPM2-204ENST00000397932 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
TRPM2-204ENST00000397932 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
TRPM2-204ENST00000397932 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
TRPM2-204ENST00000397932 PPP1R15AO75807 674 aaPredicted RBP18.08■□□□□ 0.48
TRPM2-204ENST00000397932 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
TRPM2-204ENST00000397932 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
TRPM2-204ENST00000397932 CHAF1AQ13111 956 aaPredicted RBP18.07■□□□□ 0.48
TRPM2-204ENST00000397932 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
TRPM2-204ENST00000397932 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
TRPM2-204ENST00000397932 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
TRPM2-204ENST00000397932 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
TRPM2-204ENST00000397932 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.47
TRPM2-204ENST00000397932 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
TRPM2-204ENST00000397932 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
TRPM2-204ENST00000397932 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
TRPM2-204ENST00000397932 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
TRPM2-204ENST00000397932 PLCB2Q00722 1185 aa17.98■□□□□ 0.47
TRPM2-204ENST00000397932 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
TRPM2-204ENST00000397932 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
TRPM2-204ENST00000397932 KNSTRNQ9Y448 316 aa17.96■□□□□ 0.47
TRPM2-204ENST00000397932 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
TRPM2-204ENST00000397932 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
TRPM2-204ENST00000397932 IPO9Q96P70 1041 aaKnown RBP17.91■□□□□ 0.46
TRPM2-204ENST00000397932 RGS3P49796 1198 aa17.91■□□□□ 0.46
TRPM2-204ENST00000397932 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
TRPM2-204ENST00000397932 KIF21BO75037 1637 aa17.87■□□□□ 0.45
TRPM2-204ENST00000397932 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
TRPM2-204ENST00000397932 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
TRPM2-204ENST00000397932 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
TRPM2-204ENST00000397932 GOLGA6L3A6NEY3 463 aa17.86■□□□□ 0.45
TRPM2-204ENST00000397932 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
TRPM2-204ENST00000397932 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms