RNA–Protein interactions for RNA: ENST00000397932.6

TRPM2-204, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM2, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-204ENST00000397932 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
TRPM2-204ENST00000397932 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
TRPM2-204ENST00000397932 PELP1Q8IZL8 1130 aaKnown RBP22.85■■□□□ 1.25
TRPM2-204ENST00000397932 MYT1Q01538 1121 aa22.79■■□□□ 1.24
TRPM2-204ENST00000397932 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
TRPM2-204ENST00000397932 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
TRPM2-204ENST00000397932 ERICH6Q7L0X2 663 aa21.84■■□□□ 1.09
TRPM2-204ENST00000397932 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.08
TRPM2-204ENST00000397932 PCGF6Q9BYE7 350 aa21.65■■□□□ 1.06
TRPM2-204ENST00000397932 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
TRPM2-204ENST00000397932 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
TRPM2-204ENST00000397932 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
TRPM2-204ENST00000397932 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
TRPM2-204ENST00000397932 APLP2Q06481 763 aa21.25■□□□□ 0.99
TRPM2-204ENST00000397932 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
TRPM2-204ENST00000397932 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
TRPM2-204ENST00000397932 HRCP23327 699 aa21.13■□□□□ 0.97
TRPM2-204ENST00000397932 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
TRPM2-204ENST00000397932 NEFLP07196 543 aa20.99■□□□□ 0.95
TRPM2-204ENST00000397932 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
TRPM2-204ENST00000397932 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
TRPM2-204ENST00000397932 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
TRPM2-204ENST00000397932 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
TRPM2-204ENST00000397932 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
TRPM2-204ENST00000397932 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
TRPM2-204ENST00000397932 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
TRPM2-204ENST00000397932 DAXXQ9UER7 740 aaPredicted RBP20.41■□□□□ 0.86
TRPM2-204ENST00000397932 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
TRPM2-204ENST00000397932 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
TRPM2-204ENST00000397932 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
TRPM2-204ENST00000397932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
TRPM2-204ENST00000397932 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
TRPM2-204ENST00000397932 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
TRPM2-204ENST00000397932 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
TRPM2-204ENST00000397932 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
TRPM2-204ENST00000397932 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
TRPM2-204ENST00000397932 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
TRPM2-204ENST00000397932 GLIPR1L2Q4G1C9 344 aa19.92■□□□□ 0.78
TRPM2-204ENST00000397932 BCANQ96GW7 911 aa19.87■□□□□ 0.77
TRPM2-204ENST00000397932 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
TRPM2-204ENST00000397932 ITGAEP38570 1179 aa19.82■□□□□ 0.76
TRPM2-204ENST00000397932 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
TRPM2-204ENST00000397932 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
TRPM2-204ENST00000397932 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
TRPM2-204ENST00000397932 ABCC9O60706 1549 aa19.7■□□□□ 0.74
TRPM2-204ENST00000397932 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
TRPM2-204ENST00000397932 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
TRPM2-204ENST00000397932 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
TRPM2-204ENST00000397932 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
TRPM2-204ENST00000397932 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
TRPM2-204ENST00000397932 ANP32AP39687 249 aaKnown RBP19.5■□□□□ 0.71
TRPM2-204ENST00000397932 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
TRPM2-204ENST00000397932 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
TRPM2-204ENST00000397932 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRPM2-204ENST00000397932 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
TRPM2-204ENST00000397932 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
TRPM2-204ENST00000397932 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
TRPM2-204ENST00000397932 ANP32CO43423 234 aa19.33■□□□□ 0.69
TRPM2-204ENST00000397932 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
TRPM2-204ENST00000397932 NBR1Q14596 966 aa19.3■□□□□ 0.68
TRPM2-204ENST00000397932 FKBP8Q14318 412 aa19.24■□□□□ 0.67
TRPM2-204ENST00000397932 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
TRPM2-204ENST00000397932 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
TRPM2-204ENST00000397932 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
TRPM2-204ENST00000397932 EEA1Q15075 1411 aa19.12■□□□□ 0.65
TRPM2-204ENST00000397932 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
TRPM2-204ENST00000397932 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
TRPM2-204ENST00000397932 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
TRPM2-204ENST00000397932 SLC4A1APQ9BWU0 796 aaKnown RBP19.08■□□□□ 0.64
TRPM2-204ENST00000397932 MIER1Q8N108 512 aa19.05■□□□□ 0.64
TRPM2-204ENST00000397932 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
TRPM2-204ENST00000397932 CLIP1P30622 1438 aa19.04■□□□□ 0.64
TRPM2-204ENST00000397932 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
TRPM2-204ENST00000397932 P3H3Q8IVL6 736 aa18.97■□□□□ 0.63
TRPM2-204ENST00000397932 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
TRPM2-204ENST00000397932 NACADO15069 1562 aa18.96■□□□□ 0.63
TRPM2-204ENST00000397932 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
TRPM2-204ENST00000397932 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
TRPM2-204ENST00000397932 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
TRPM2-204ENST00000397932 ARXQ96QS3 562 aa18.89■□□□□ 0.61
TRPM2-204ENST00000397932 ZNF326Q5BKZ1 582 aaKnown RBP18.87■□□□□ 0.61
TRPM2-204ENST00000397932 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
TRPM2-204ENST00000397932 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
TRPM2-204ENST00000397932 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
TRPM2-204ENST00000397932 NEFMP07197 916 aa18.81■□□□□ 0.6
TRPM2-204ENST00000397932 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
TRPM2-204ENST00000397932 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRPM2-204ENST00000397932 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
TRPM2-204ENST00000397932 NAP1L5Q96NT1 182 aaPredicted RBP18.77■□□□□ 0.6
TRPM2-204ENST00000397932 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
TRPM2-204ENST00000397932 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
TRPM2-204ENST00000397932 CCDC136Q96JN2 1154 aa18.74■□□□□ 0.59
TRPM2-204ENST00000397932 CDK11BP21127 795 aaKnown RBP18.74■□□□□ 0.59
TRPM2-204ENST00000397932 DEKP35659 375 aaKnown RBP18.74■□□□□ 0.59
TRPM2-204ENST00000397932 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
TRPM2-204ENST00000397932 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
TRPM2-204ENST00000397932 FAM9BQ8IZU0 186 aa18.65■□□□□ 0.58
TRPM2-204ENST00000397932 SOGA1O94964 1423 aa18.64■□□□□ 0.57
TRPM2-204ENST00000397932 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
TRPM2-204ENST00000397932 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms