RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 PHLDB1Q86UU1 1377 aa19.6■□□□□ 0.73
COL6A2-203ENST00000397763 MAPKBP1O60336 1514 aa19.58■□□□□ 0.73
COL6A2-203ENST00000397763 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
COL6A2-203ENST00000397763 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
COL6A2-203ENST00000397763 IGF1RP08069 1367 aa19.56■□□□□ 0.72
COL6A2-203ENST00000397763 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
COL6A2-203ENST00000397763 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
COL6A2-203ENST00000397763 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
COL6A2-203ENST00000397763 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
COL6A2-203ENST00000397763 CFTRP13569 1480 aa19.45■□□□□ 0.7
COL6A2-203ENST00000397763 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
COL6A2-203ENST00000397763 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
COL6A2-203ENST00000397763 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
COL6A2-203ENST00000397763 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
COL6A2-203ENST00000397763 ANP32CO43423 234 aa19.44■□□□□ 0.7
COL6A2-203ENST00000397763 NEFLP07196 543 aa19.44■□□□□ 0.7
COL6A2-203ENST00000397763 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
COL6A2-203ENST00000397763 RBM19Q9Y4C8 960 aaKnown RBP19.35■□□□□ 0.69
COL6A2-203ENST00000397763 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
COL6A2-203ENST00000397763 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
COL6A2-203ENST00000397763 CHIC2Q9UKJ5 165 aa19.34■□□□□ 0.69
COL6A2-203ENST00000397763 HMGXB3Q12766 1538 aa19.33■□□□□ 0.69
COL6A2-203ENST00000397763 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
COL6A2-203ENST00000397763 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
COL6A2-203ENST00000397763 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
COL6A2-203ENST00000397763 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL6A2-203ENST00000397763 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
COL6A2-203ENST00000397763 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
COL6A2-203ENST00000397763 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
COL6A2-203ENST00000397763 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
COL6A2-203ENST00000397763 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
COL6A2-203ENST00000397763 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
COL6A2-203ENST00000397763 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
COL6A2-203ENST00000397763 FOXD1Q16676 465 aa19.23■□□□□ 0.67
COL6A2-203ENST00000397763 CCDC184Q52MB2 194 aa19.21■□□□□ 0.67
COL6A2-203ENST00000397763 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
COL6A2-203ENST00000397763 MAP3K1Q13233 1512 aa19.18■□□□□ 0.66
COL6A2-203ENST00000397763 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL6A2-203ENST00000397763 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
COL6A2-203ENST00000397763 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
COL6A2-203ENST00000397763 MSH5O43196 834 aa19.16■□□□□ 0.66
COL6A2-203ENST00000397763 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
COL6A2-203ENST00000397763 HSPA5P11021 654 aaKnown RBP19.16■□□□□ 0.66
COL6A2-203ENST00000397763 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
COL6A2-203ENST00000397763 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.66
COL6A2-203ENST00000397763 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
COL6A2-203ENST00000397763 NESP48681 1621 aa19.13■□□□□ 0.65
COL6A2-203ENST00000397763 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
COL6A2-203ENST00000397763 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
COL6A2-203ENST00000397763 CFAP43Q8NDM7 1665 aa19.1■□□□□ 0.65
COL6A2-203ENST00000397763 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.65
COL6A2-203ENST00000397763 POLR3GLQ9BT43 218 aa19.08■□□□□ 0.65
COL6A2-203ENST00000397763 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
COL6A2-203ENST00000397763 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
COL6A2-203ENST00000397763 NAIPQ13075 1403 aa19.06■□□□□ 0.64
COL6A2-203ENST00000397763 UACAQ9BZF9 1416 aa19.06■□□□□ 0.64
COL6A2-203ENST00000397763 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
COL6A2-203ENST00000397763 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-203ENST00000397763 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
COL6A2-203ENST00000397763 HFM1A2PYH4 1435 aa19.03■□□□□ 0.64
COL6A2-203ENST00000397763 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
COL6A2-203ENST00000397763 FMN1Q68DA7 1419 aa19.01■□□□□ 0.63
COL6A2-203ENST00000397763 EIF4G2P78344 907 aaKnown RBP eCLIP19.01■□□□□ 0.63
COL6A2-203ENST00000397763 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
COL6A2-203ENST00000397763 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
COL6A2-203ENST00000397763 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
COL6A2-203ENST00000397763 TOPBP1Q92547 1522 aa19■□□□□ 0.63
COL6A2-203ENST00000397763 ZNF326Q5BKZ1 582 aaKnown RBP18.98■□□□□ 0.63
COL6A2-203ENST00000397763 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
COL6A2-203ENST00000397763 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
COL6A2-203ENST00000397763 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
COL6A2-203ENST00000397763 PRDM2Q13029 1718 aa18.96■□□□□ 0.63
COL6A2-203ENST00000397763 ABCA10Q8WWZ4 1543 aa18.96■□□□□ 0.63
COL6A2-203ENST00000397763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
COL6A2-203ENST00000397763 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
COL6A2-203ENST00000397763 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
COL6A2-203ENST00000397763 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
COL6A2-203ENST00000397763 KDM5BQ9UGL1 1544 aa18.93■□□□□ 0.62
COL6A2-203ENST00000397763 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
COL6A2-203ENST00000397763 ZNF644Q9H582 1327 aaPredicted RBP18.91■□□□□ 0.62
COL6A2-203ENST00000397763 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
COL6A2-203ENST00000397763 KDM6BO15054 1643 aa18.9■□□□□ 0.62
COL6A2-203ENST00000397763 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
COL6A2-203ENST00000397763 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
COL6A2-203ENST00000397763 DENND4BO75064 1496 aaPredicted RBP18.89■□□□□ 0.61
COL6A2-203ENST00000397763 PPP4R2Q9NY27 417 aa18.87■□□□□ 0.61
COL6A2-203ENST00000397763 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
COL6A2-203ENST00000397763 PRKCSHP14314 528 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-203ENST00000397763 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
COL6A2-203ENST00000397763 NBR1Q14596 966 aa18.85■□□□□ 0.61
COL6A2-203ENST00000397763 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
COL6A2-203ENST00000397763 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
COL6A2-203ENST00000397763 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
COL6A2-203ENST00000397763 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
COL6A2-203ENST00000397763 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
COL6A2-203ENST00000397763 KIF7Q2M1P5 1343 aa18.82■□□□□ 0.6
COL6A2-203ENST00000397763 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
COL6A2-203ENST00000397763 ZNF777Q9ULD5 760 aaPredicted RBP18.81■□□□□ 0.6
COL6A2-203ENST00000397763 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
COL6A2-203ENST00000397763 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms