RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CLASP1Q7Z460 1538 aa31.78■■■□□ 2.68
MAP1LC3A-203ENST00000397709 KIAA0586Q9BVV6 1533 aa31.77■■■□□ 2.68
MAP1LC3A-203ENST00000397709 UBTFP17480 764 aaKnown RBP31.72■■■□□ 2.67
MAP1LC3A-203ENST00000397709 LOC105371045A0A1W2PR82 267 aa31.71■■■□□ 2.67
MAP1LC3A-203ENST00000397709 IQGAP2Q13576 1575 aa31.7■■■□□ 2.67
MAP1LC3A-203ENST00000397709 TNIKQ9UKE5 1360 aa31.66■■■□□ 2.66
MAP1LC3A-203ENST00000397709 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
MAP1LC3A-203ENST00000397709 UGGT2Q9NYU1 1516 aa31.57■■■□□ 2.64
MAP1LC3A-203ENST00000397709 JPH4Q96JJ6 628 aa31.54■■■□□ 2.64
MAP1LC3A-203ENST00000397709 PRG4Q92954 1404 aaPredicted RBP31.45■■■□□ 2.63
MAP1LC3A-203ENST00000397709 SAMD9Q5K651 1589 aa31.44■■■□□ 2.62
MAP1LC3A-203ENST00000397709 DISP1Q96F81 1524 aa31.44■■■□□ 2.62
MAP1LC3A-203ENST00000397709 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
MAP1LC3A-203ENST00000397709 KIAA0556O60303 1618 aa31.41■■■□□ 2.62
MAP1LC3A-203ENST00000397709 ERCC6L2Q5T890 1561 aa31.4■■■□□ 2.62
MAP1LC3A-203ENST00000397709 CEP162Q5TB80 1403 aa31.4■■■□□ 2.62
MAP1LC3A-203ENST00000397709 RANGAP1P46060 587 aaPredicted RBP31.39■■■□□ 2.62
MAP1LC3A-203ENST00000397709 CLIP1P30622 1438 aa31.37■■■□□ 2.61
MAP1LC3A-203ENST00000397709 CARMIL2Q6F5E8 1435 aa31.37■■■□□ 2.61
MAP1LC3A-203ENST00000397709 ARHGAP35Q9NRY4 1499 aa31.36■■■□□ 2.61
MAP1LC3A-203ENST00000397709 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
MAP1LC3A-203ENST00000397709 RIMBP3CA6NJZ7 1639 aa31.27■■■□□ 2.6
MAP1LC3A-203ENST00000397709 RIMBP3BA6NNM3 1639 aa31.27■■■□□ 2.6
MAP1LC3A-203ENST00000397709 RIMBP3Q9UFD9 1639 aa31.27■■■□□ 2.6
MAP1LC3A-203ENST00000397709 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
MAP1LC3A-203ENST00000397709 P3H3Q8IVL6 736 aa31.24■■■□□ 2.59
MAP1LC3A-203ENST00000397709 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
MAP1LC3A-203ENST00000397709 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
MAP1LC3A-203ENST00000397709 PTPRGP23470 1445 aa31.15■■■□□ 2.58
MAP1LC3A-203ENST00000397709 FMN1Q68DA7 1419 aa31.08■■■□□ 2.57
MAP1LC3A-203ENST00000397709 TTBK1Q5TCY1 1321 aaPredicted RBP31.06■■■□□ 2.56
MAP1LC3A-203ENST00000397709 ABCA8O94911 1581 aa31.02■■■□□ 2.56
MAP1LC3A-203ENST00000397709 PLB1Q6P1J6 1458 aa31■■■□□ 2.55
MAP1LC3A-203ENST00000397709 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
MAP1LC3A-203ENST00000397709 UACAQ9BZF9 1416 aa30.98■■■□□ 2.55
MAP1LC3A-203ENST00000397709 RAPGEF6Q8TEU7 1601 aa30.98■■■□□ 2.55
MAP1LC3A-203ENST00000397709 PCF11O94913 1555 aaKnown RBP30.95■■■□□ 2.54
MAP1LC3A-203ENST00000397709 UHRF1BP1LA0JNW5 1464 aa30.95■■■□□ 2.54
MAP1LC3A-203ENST00000397709 ABCC2Q92887 1545 aa30.94■■■□□ 2.54
MAP1LC3A-203ENST00000397709 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
MAP1LC3A-203ENST00000397709 CASKIN1Q8WXD9 1431 aa30.93■■■□□ 2.54
MAP1LC3A-203ENST00000397709 ADCY10Q96PN6 1610 aa30.91■■■□□ 2.54
MAP1LC3A-203ENST00000397709 FYCO1Q9BQS8 1478 aa30.9■■■□□ 2.54
MAP1LC3A-203ENST00000397709 HECW1Q76N89 1606 aa30.88■■■□□ 2.53
MAP1LC3A-203ENST00000397709 NUP153P49790 1475 aaKnown RBP30.87■■■□□ 2.53
MAP1LC3A-203ENST00000397709 KDM5BQ9UGL1 1544 aa30.79■■■□□ 2.52
MAP1LC3A-203ENST00000397709 LRRIQ1Q96JM4 1722 aa30.79■■■□□ 2.52
MAP1LC3A-203ENST00000397709 EPRSP07814 1512 aaKnown RBP30.77■■■□□ 2.52
MAP1LC3A-203ENST00000397709 ATP1B4Q9UN42 357 aaPredicted RBP30.75■■■□□ 2.51
MAP1LC3A-203ENST00000397709 ATP10BO94823 1461 aa30.74■■■□□ 2.51
MAP1LC3A-203ENST00000397709 CCDC18Q5T9S5 1454 aa30.74■■■□□ 2.51
MAP1LC3A-203ENST00000397709 ZCCHC11Q5TAX3 1644 aaKnown RBP30.73■■■□□ 2.51
MAP1LC3A-203ENST00000397709 CDK13Q14004 1512 aaKnown RBP30.72■■■□□ 2.51
MAP1LC3A-203ENST00000397709 ARID3CA6NKF2 412 aa30.69■■■□□ 2.5
MAP1LC3A-203ENST00000397709 CFAP43Q8NDM7 1665 aa30.66■■■□□ 2.5
MAP1LC3A-203ENST00000397709 MAP3K1Q13233 1512 aa30.65■■■□□ 2.5
MAP1LC3A-203ENST00000397709 NPM1P06748 294 aaKnown RBP eCLIP30.64■■■□□ 2.5
MAP1LC3A-203ENST00000397709 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
MAP1LC3A-203ENST00000397709 MAPKBP1O60336 1514 aa30.59■■■□□ 2.49
MAP1LC3A-203ENST00000397709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.59■■■□□ 2.49
MAP1LC3A-203ENST00000397709 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
MAP1LC3A-203ENST00000397709 APLP2Q06481 763 aa30.54■■■□□ 2.48
MAP1LC3A-203ENST00000397709 ASXL2Q76L83 1435 aa30.54■■■□□ 2.48
MAP1LC3A-203ENST00000397709 MAGI3Q5TCQ9 1506 aa30.53■■■□□ 2.48
MAP1LC3A-203ENST00000397709 CDK11AQ9UQ88 783 aaPredicted RBP30.52■■■□□ 2.48
MAP1LC3A-203ENST00000397709 WDR7Q9Y4E6 1490 aa30.5■■■□□ 2.47
MAP1LC3A-203ENST00000397709 PLEKHD1A6NEE1 506 aa30.49■■■□□ 2.47
MAP1LC3A-203ENST00000397709 TROQ12816 1431 aaPredicted RBP30.48■■■□□ 2.47
MAP1LC3A-203ENST00000397709 LRRC9Q6ZRR7 1453 aa30.48■■■□□ 2.47
MAP1LC3A-203ENST00000397709 EHBP1L1Q8N3D4 1523 aa30.47■■■□□ 2.47
MAP1LC3A-203ENST00000397709 MTUS2Q5JR59 1369 aa30.44■■■□□ 2.46
MAP1LC3A-203ENST00000397709 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
MAP1LC3A-203ENST00000397709 KIF14Q15058 1648 aa30.37■■■□□ 2.45
MAP1LC3A-203ENST00000397709 ABCC10Q5T3U5 1492 aa30.34■■■□□ 2.45
MAP1LC3A-203ENST00000397709 DIP2BQ9P265 1576 aa30.33■■■□□ 2.45
MAP1LC3A-203ENST00000397709 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
MAP1LC3A-203ENST00000397709 KCNH8Q96L42 1107 aa30.32■■■□□ 2.44
MAP1LC3A-203ENST00000397709 GLI2P10070 1586 aa30.31■■■□□ 2.44
MAP1LC3A-203ENST00000397709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.29■■■□□ 2.44
MAP1LC3A-203ENST00000397709 NCOA2Q15596 1464 aa30.28■■■□□ 2.44
MAP1LC3A-203ENST00000397709 ABCA9Q8IUA7 1624 aa30.28■■■□□ 2.44
MAP1LC3A-203ENST00000397709 TTC37Q6PGP7 1564 aa30.27■■■□□ 2.44
MAP1LC3A-203ENST00000397709 KIF13AQ9H1H9 1805 aa30.25■■■□□ 2.43
MAP1LC3A-203ENST00000397709 PPARGC1BQ86YN6 1023 aaKnown RBP30.25■■■□□ 2.43
MAP1LC3A-203ENST00000397709 FAM69CQ0P6D2 419 aa30.2■■■□□ 2.43
MAP1LC3A-203ENST00000397709 MAP3K4Q9Y6R4 1608 aa30.19■■■□□ 2.42
MAP1LC3A-203ENST00000397709 CDC42BPAQ5VT25 1732 aa30.16■■■□□ 2.42
MAP1LC3A-203ENST00000397709 MYO5CQ9NQX4 1742 aa30.15■■■□□ 2.42
MAP1LC3A-203ENST00000397709 CCNB3Q8WWL7 1395 aa30.15■■■□□ 2.42
MAP1LC3A-203ENST00000397709 GPATCH8Q9UKJ3 1502 aaKnown RBP30.14■■■□□ 2.42
MAP1LC3A-203ENST00000397709 PHLDB1Q86UU1 1377 aa30.14■■■□□ 2.41
MAP1LC3A-203ENST00000397709 PREX2Q70Z35 1606 aa30.13■■■□□ 2.41
MAP1LC3A-203ENST00000397709 CD109Q6YHK3 1445 aa30.13■■■□□ 2.41
MAP1LC3A-203ENST00000397709 ITSN2Q9NZM3 1697 aa30.12■■■□□ 2.41
MAP1LC3A-203ENST00000397709 PLCH2O75038 1416 aa30.11■■■□□ 2.41
MAP1LC3A-203ENST00000397709 ARAP3Q8WWN8 1544 aa30.11■■■□□ 2.41
MAP1LC3A-203ENST00000397709 MYOM3Q5VTT5 1437 aa30.09■■■□□ 2.41
MAP1LC3A-203ENST00000397709 CDC42BPBQ9Y5S2 1711 aa30.09■■■□□ 2.41
MAP1LC3A-203ENST00000397709 PPRC1Q5VV67 1664 aaKnown RBP30.05■■■□□ 2.4
MAP1LC3A-203ENST00000397709 TRHP20396 242 aaPredicted RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms