RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 NISCHQ9Y2I1 1504 aa46.16■■■■■ 4.98
MAP1LC3A-203ENST00000397709 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
MAP1LC3A-203ENST00000397709 ABCC9O60706 1549 aa39.14■■■■□ 3.86
MAP1LC3A-203ENST00000397709 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
MAP1LC3A-203ENST00000397709 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
MAP1LC3A-203ENST00000397709 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
MAP1LC3A-203ENST00000397709 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
MAP1LC3A-203ENST00000397709 NACADO15069 1562 aa38.12■■■■□ 3.69
MAP1LC3A-203ENST00000397709 RB1CC1Q8TDY2 1594 aa37.98■■■■□ 3.67
MAP1LC3A-203ENST00000397709 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
MAP1LC3A-203ENST00000397709 UNC13AQ9UPW8 1703 aa37.17■■■■□ 3.54
MAP1LC3A-203ENST00000397709 BICRAQ9NZM4 1560 aa36.85■■■■□ 3.49
MAP1LC3A-203ENST00000397709 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
MAP1LC3A-203ENST00000397709 PABPN1Q86U42 306 aaKnown RBP eCLIP36.68■■■■□ 3.46
MAP1LC3A-203ENST00000397709 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
MAP1LC3A-203ENST00000397709 EIF4G1Q04637 1599 aaKnown RBP35.8■■■■□ 3.32
MAP1LC3A-203ENST00000397709 BAZ1AQ9NRL2 1556 aaPredicted RBP35.72■■■■□ 3.31
MAP1LC3A-203ENST00000397709 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
MAP1LC3A-203ENST00000397709 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
MAP1LC3A-203ENST00000397709 CC2D2AQ9P2K1 1620 aa35.47■■■■□ 3.27
MAP1LC3A-203ENST00000397709 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
MAP1LC3A-203ENST00000397709 PEG3Q9GZU2 1588 aa35.34■■■■□ 3.25
MAP1LC3A-203ENST00000397709 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
MAP1LC3A-203ENST00000397709 DNAJC5BQ9UF47 199 aa35.29■■■■□ 3.24
MAP1LC3A-203ENST00000397709 SMARCA2P51531 1590 aa35.28■■■■□ 3.24
MAP1LC3A-203ENST00000397709 WIZO95785 1651 aa35.24■■■■□ 3.23
MAP1LC3A-203ENST00000397709 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
MAP1LC3A-203ENST00000397709 HMGXB3Q12766 1538 aa35.08■■■■□ 3.21
MAP1LC3A-203ENST00000397709 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
MAP1LC3A-203ENST00000397709 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
MAP1LC3A-203ENST00000397709 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
MAP1LC3A-203ENST00000397709 CCDC88BA6NC98 1476 aa34.48■■■■□ 3.11
MAP1LC3A-203ENST00000397709 CADPSQ9ULU8 1353 aa34.16■■■■□ 3.06
MAP1LC3A-203ENST00000397709 LAMC3Q9Y6N6 1575 aa34.13■■■■□ 3.05
MAP1LC3A-203ENST00000397709 CFTRP13569 1480 aa34.13■■■■□ 3.05
MAP1LC3A-203ENST00000397709 NESP48681 1621 aa34.1■■■■□ 3.05
MAP1LC3A-203ENST00000397709 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
MAP1LC3A-203ENST00000397709 PDS5BQ9NTI5 1447 aa33.85■■■■□ 3.01
MAP1LC3A-203ENST00000397709 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
MAP1LC3A-203ENST00000397709 KIF21AQ7Z4S6 1674 aa33.74■■■□□ 2.99
MAP1LC3A-203ENST00000397709 ERCC6Q03468 1493 aa33.67■■■□□ 2.98
MAP1LC3A-203ENST00000397709 CEP164Q9UPV0 1460 aa33.67■■■□□ 2.98
MAP1LC3A-203ENST00000397709 MRC2Q9UBG0 1479 aa33.49■■■□□ 2.95
MAP1LC3A-203ENST00000397709 THOC2Q8NI27 1593 aaKnown RBP33.47■■■□□ 2.95
MAP1LC3A-203ENST00000397709 ABCC8Q09428 1581 aa33.44■■■□□ 2.94
MAP1LC3A-203ENST00000397709 URB2Q14146 1524 aaKnown RBP33.41■■■□□ 2.94
MAP1LC3A-203ENST00000397709 WDR62O43379 1518 aa33.38■■■□□ 2.93
MAP1LC3A-203ENST00000397709 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.93
MAP1LC3A-203ENST00000397709 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
MAP1LC3A-203ENST00000397709 CUX1P39880 1505 aa33.35■■■□□ 2.93
MAP1LC3A-203ENST00000397709 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
MAP1LC3A-203ENST00000397709 SYNJ1O43426 1573 aa33.28■■■□□ 2.92
MAP1LC3A-203ENST00000397709 TOP2BQ02880 1626 aa33.25■■■□□ 2.91
MAP1LC3A-203ENST00000397709 BIVM-ERCC5R4GMW8 1640 aa33.25■■■□□ 2.91
MAP1LC3A-203ENST00000397709 CUX2O14529 1486 aa33.11■■■□□ 2.89
MAP1LC3A-203ENST00000397709 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
MAP1LC3A-203ENST00000397709 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
MAP1LC3A-203ENST00000397709 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
MAP1LC3A-203ENST00000397709 TRIM41Q8WV44 630 aa33.01■■■□□ 2.87
MAP1LC3A-203ENST00000397709 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
MAP1LC3A-203ENST00000397709 SOGA1O94964 1423 aa32.94■■■□□ 2.86
MAP1LC3A-203ENST00000397709 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
MAP1LC3A-203ENST00000397709 TARBP1Q13395 1621 aaKnown RBP32.93■■■□□ 2.86
MAP1LC3A-203ENST00000397709 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
MAP1LC3A-203ENST00000397709 ABCA10Q8WWZ4 1543 aa32.83■■■□□ 2.85
MAP1LC3A-203ENST00000397709 ZNF608Q9ULD9 1512 aaPredicted RBP32.73■■■□□ 2.83
MAP1LC3A-203ENST00000397709 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
MAP1LC3A-203ENST00000397709 TDRD9Q8NDG6 1382 aaKnown RBP32.66■■■□□ 2.82
MAP1LC3A-203ENST00000397709 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
MAP1LC3A-203ENST00000397709 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.81
MAP1LC3A-203ENST00000397709 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
MAP1LC3A-203ENST00000397709 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
MAP1LC3A-203ENST00000397709 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
MAP1LC3A-203ENST00000397709 PBRM1Q86U86 1689 aa32.5■■■□□ 2.79
MAP1LC3A-203ENST00000397709 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
MAP1LC3A-203ENST00000397709 EEA1Q15075 1411 aa32.46■■■□□ 2.79
MAP1LC3A-203ENST00000397709 ERICH3Q5RHP9 1530 aa32.45■■■□□ 2.78
MAP1LC3A-203ENST00000397709 IGF1RP08069 1367 aa32.39■■■□□ 2.78
MAP1LC3A-203ENST00000397709 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
MAP1LC3A-203ENST00000397709 MAGI1Q96QZ7 1491 aaPredicted RBP32.34■■■□□ 2.77
MAP1LC3A-203ENST00000397709 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
MAP1LC3A-203ENST00000397709 FAM9AQ8IZU1 332 aaPredicted RBP32.3■■■□□ 2.76
MAP1LC3A-203ENST00000397709 CUL7Q14999 1698 aa32.3■■■□□ 2.76
MAP1LC3A-203ENST00000397709 CSRNP3Q8WYN3 585 aa32.28■■■□□ 2.76
MAP1LC3A-203ENST00000397709 FHAD1B1AJZ9 1412 aa32.24■■■□□ 2.75
MAP1LC3A-203ENST00000397709 CARMIL1Q5VZK9 1371 aa32.2■■■□□ 2.75
MAP1LC3A-203ENST00000397709 SYNJ2O15056 1496 aa32.2■■■□□ 2.75
MAP1LC3A-203ENST00000397709 PRXQ9BXM0 1461 aa32.19■■■□□ 2.74
MAP1LC3A-203ENST00000397709 CHD1O14646 1710 aa32.11■■■□□ 2.73
MAP1LC3A-203ENST00000397709 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
MAP1LC3A-203ENST00000397709 KIF21BO75037 1637 aa32.1■■■□□ 2.73
MAP1LC3A-203ENST00000397709 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
MAP1LC3A-203ENST00000397709 CHMP7Q8WUX9 453 aaPredicted RBP32.07■■■□□ 2.72
MAP1LC3A-203ENST00000397709 FBLN2P98095 1184 aa32.02■■■□□ 2.72
MAP1LC3A-203ENST00000397709 GOLGA3Q08378 1498 aa31.94■■■□□ 2.7
MAP1LC3A-203ENST00000397709 NUP160Q12769 1436 aa31.92■■■□□ 2.7
MAP1LC3A-203ENST00000397709 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
MAP1LC3A-203ENST00000397709 OSCARQ8IYS5 282 aa31.8■■■□□ 2.68
MAP1LC3A-203ENST00000397709 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
MAP1LC3A-203ENST00000397709 CTTNBP2Q8WZ74 1663 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms