RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.88
RBM39-205ENST00000397370 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.88
RBM39-205ENST00000397370 KIAA0586Q9BVV6 1533 aa26.8■■□□□ 1.88
RBM39-205ENST00000397370 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
RBM39-205ENST00000397370 JPH4Q96JJ6 628 aa26.73■■□□□ 1.87
RBM39-205ENST00000397370 KIF21BO75037 1637 aa26.7■■□□□ 1.86
RBM39-205ENST00000397370 IQGAP2Q13576 1575 aa26.69■■□□□ 1.86
RBM39-205ENST00000397370 CTTNBP2Q8WZ74 1663 aa26.69■■□□□ 1.86
RBM39-205ENST00000397370 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
RBM39-205ENST00000397370 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
RBM39-205ENST00000397370 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
RBM39-205ENST00000397370 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
RBM39-205ENST00000397370 UGGT2Q9NYU1 1516 aa26.55■■□□□ 1.84
RBM39-205ENST00000397370 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
RBM39-205ENST00000397370 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
RBM39-205ENST00000397370 EHMT2Q96KQ7 1210 aa26.5■■□□□ 1.83
RBM39-205ENST00000397370 CARMIL2Q6F5E8 1435 aa26.49■■□□□ 1.83
RBM39-205ENST00000397370 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
RBM39-205ENST00000397370 UBTFP17480 764 aaKnown RBP26.45■■□□□ 1.82
RBM39-205ENST00000397370 KIAA0556O60303 1618 aa26.43■■□□□ 1.82
RBM39-205ENST00000397370 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
RBM39-205ENST00000397370 PTPRGP23470 1445 aa26.36■■□□□ 1.81
RBM39-205ENST00000397370 SAMD9Q5K651 1589 aa26.33■■□□□ 1.81
RBM39-205ENST00000397370 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
RBM39-205ENST00000397370 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
RBM39-205ENST00000397370 P3H3Q8IVL6 736 aa26.27■■□□□ 1.8
RBM39-205ENST00000397370 EFCAB5A4FU69 1503 aa26.25■■□□□ 1.79
RBM39-205ENST00000397370 ADCY10Q96PN6 1610 aa26.24■■□□□ 1.79
RBM39-205ENST00000397370 UACAQ9BZF9 1416 aa26.19■■□□□ 1.78
RBM39-205ENST00000397370 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
RBM39-205ENST00000397370 UHRF1BP1LA0JNW5 1464 aa26.17■■□□□ 1.78
RBM39-205ENST00000397370 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
RBM39-205ENST00000397370 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
RBM39-205ENST00000397370 ABCC2Q92887 1545 aa26.15■■□□□ 1.78
RBM39-205ENST00000397370 PLB1Q6P1J6 1458 aa26.14■■□□□ 1.78
RBM39-205ENST00000397370 ABCA8O94911 1581 aa26.13■■□□□ 1.77
RBM39-205ENST00000397370 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
RBM39-205ENST00000397370 CLIP1P30622 1438 aa26.05■■□□□ 1.76
RBM39-205ENST00000397370 RAPGEF6Q8TEU7 1601 aa26.04■■□□□ 1.76
RBM39-205ENST00000397370 KDM5BQ9UGL1 1544 aa26.04■■□□□ 1.76
RBM39-205ENST00000397370 MAPKBP1O60336 1514 aa26.02■■□□□ 1.76
RBM39-205ENST00000397370 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
RBM39-205ENST00000397370 CEP162Q5TB80 1403 aa26■■□□□ 1.75
RBM39-205ENST00000397370 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
RBM39-205ENST00000397370 TRHP20396 242 aaPredicted RBP25.94■■□□□ 1.74
RBM39-205ENST00000397370 NUP153P49790 1475 aaKnown RBP25.93■■□□□ 1.74
RBM39-205ENST00000397370 ATP10BO94823 1461 aa25.91■■□□□ 1.74
RBM39-205ENST00000397370 ASXL2Q76L83 1435 aa25.91■■□□□ 1.74
RBM39-205ENST00000397370 ARID3CA6NKF2 412 aa25.9■■□□□ 1.74
RBM39-205ENST00000397370 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
RBM39-205ENST00000397370 ABCC10Q5T3U5 1492 aa25.86■■□□□ 1.73
RBM39-205ENST00000397370 HECW1Q76N89 1606 aa25.86■■□□□ 1.73
RBM39-205ENST00000397370 DIP2BQ9P265 1576 aa25.84■■□□□ 1.73
RBM39-205ENST00000397370 PCF11O94913 1555 aaKnown RBP25.83■■□□□ 1.73
RBM39-205ENST00000397370 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
RBM39-205ENST00000397370 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
RBM39-205ENST00000397370 WDR7Q9Y4E6 1490 aa25.82■■□□□ 1.72
RBM39-205ENST00000397370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
RBM39-205ENST00000397370 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
RBM39-205ENST00000397370 FAM69CQ0P6D2 419 aa25.79■■□□□ 1.72
RBM39-205ENST00000397370 EPRSP07814 1512 aaKnown RBP25.78■■□□□ 1.72
RBM39-205ENST00000397370 CDK13Q14004 1512 aaKnown RBP25.78■■□□□ 1.72
RBM39-205ENST00000397370 LRRIQ1Q96JM4 1722 aa25.78■■□□□ 1.72
RBM39-205ENST00000397370 FYCO1Q9BQS8 1478 aa25.77■■□□□ 1.72
RBM39-205ENST00000397370 GLI2P10070 1586 aa25.74■■□□□ 1.71
RBM39-205ENST00000397370 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
RBM39-205ENST00000397370 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.7
RBM39-205ENST00000397370 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
RBM39-205ENST00000397370 VPS8Q8N3P4 1428 aa25.68■■□□□ 1.7
RBM39-205ENST00000397370 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
RBM39-205ENST00000397370 MAP3K4Q9Y6R4 1608 aa25.64■■□□□ 1.7
RBM39-205ENST00000397370 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
RBM39-205ENST00000397370 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
RBM39-205ENST00000397370 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
RBM39-205ENST00000397370 PPRC1Q5VV67 1664 aaKnown RBP25.58■■□□□ 1.69
RBM39-205ENST00000397370 TROQ12816 1431 aaPredicted RBP25.57■■□□□ 1.68
RBM39-205ENST00000397370 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
RBM39-205ENST00000397370 MAGI3Q5TCQ9 1506 aa25.55■■□□□ 1.68
RBM39-205ENST00000397370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.53■■□□□ 1.68
RBM39-205ENST00000397370 KIF14Q15058 1648 aa25.51■■□□□ 1.67
RBM39-205ENST00000397370 TTC37Q6PGP7 1564 aa25.49■■□□□ 1.67
RBM39-205ENST00000397370 TEX14Q8IWB6 1497 aa25.48■■□□□ 1.67
RBM39-205ENST00000397370 TIAM1Q13009 1591 aa25.48■■□□□ 1.67
RBM39-205ENST00000397370 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
RBM39-205ENST00000397370 MAP3K1Q13233 1512 aa25.43■■□□□ 1.66
RBM39-205ENST00000397370 EHBP1L1Q8N3D4 1523 aa25.42■■□□□ 1.66
RBM39-205ENST00000397370 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
RBM39-205ENST00000397370 PLCH2O75038 1416 aa25.37■■□□□ 1.65
RBM39-205ENST00000397370 KDM6BO15054 1643 aa25.37■■□□□ 1.65
RBM39-205ENST00000397370 LRRC9Q6ZRR7 1453 aa25.36■■□□□ 1.65
RBM39-205ENST00000397370 APLP2Q06481 763 aa25.36■■□□□ 1.65
RBM39-205ENST00000397370 NEO1Q92859 1461 aa25.34■■□□□ 1.65
RBM39-205ENST00000397370 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
RBM39-205ENST00000397370 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
RBM39-205ENST00000397370 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
RBM39-205ENST00000397370 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
RBM39-205ENST00000397370 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
RBM39-205ENST00000397370 FANCAO15360 1455 aa25.32■■□□□ 1.64
RBM39-205ENST00000397370 SUPT6HQ7KZ85 1726 aaKnown RBP25.32■■□□□ 1.64
RBM39-205ENST00000397370 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms