RNA–Protein interactions for RNA: ENST00000397185.4

AP003170.5-201, humanhuman

BASIC

Gene AP003170.5, Length 335 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003170.5-201ENST00000397185 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
AP003170.5-201ENST00000397185 CUX2O14529 1486 aa9.57□□□□□ -0.88
AP003170.5-201ENST00000397185 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
AP003170.5-201ENST00000397185 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
AP003170.5-201ENST00000397185 ATAD2BQ9ULI0 1458 aa9.55□□□□□ -0.88
AP003170.5-201ENST00000397185 EHMT2Q96KQ7 1210 aa9.55□□□□□ -0.88
AP003170.5-201ENST00000397185 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
AP003170.5-201ENST00000397185 CLIP1P30622 1438 aa9.55□□□□□ -0.88
AP003170.5-201ENST00000397185 HAX1O00165 279 aa9.54□□□□□ -0.88
AP003170.5-201ENST00000397185 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
AP003170.5-201ENST00000397185 SYNJ1O43426 1573 aa9.52□□□□□ -0.89
AP003170.5-201ENST00000397185 BIVM-ERCC5R4GMW8 1640 aa9.52□□□□□ -0.89
AP003170.5-201ENST00000397185 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
AP003170.5-201ENST00000397185 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
AP003170.5-201ENST00000397185 MYCNP04198 464 aaPredicted RBP9.48□□□□□ -0.89
AP003170.5-201ENST00000397185 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
AP003170.5-201ENST00000397185 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
AP003170.5-201ENST00000397185 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
AP003170.5-201ENST00000397185 NCAPD3P42695 1498 aa9.43□□□□□ -0.9
AP003170.5-201ENST00000397185 ZBTB12Q9Y330 459 aaPredicted RBP9.43□□□□□ -0.9
AP003170.5-201ENST00000397185 RAPGEF2Q9Y4G8 1499 aa9.42□□□□□ -0.9
AP003170.5-201ENST00000397185 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
AP003170.5-201ENST00000397185 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
AP003170.5-201ENST00000397185 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
AP003170.5-201ENST00000397185 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
AP003170.5-201ENST00000397185 MAP3K1Q13233 1512 aa9.4□□□□□ -0.91
AP003170.5-201ENST00000397185 PRDM2Q13029 1718 aa9.39□□□□□ -0.91
AP003170.5-201ENST00000397185 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
AP003170.5-201ENST00000397185 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
AP003170.5-201ENST00000397185 CFTRP13569 1480 aa9.34□□□□□ -0.91
AP003170.5-201ENST00000397185 EVX2Q03828 476 aa9.34□□□□□ -0.91
AP003170.5-201ENST00000397185 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
AP003170.5-201ENST00000397185 DHX57Q6P158 1386 aaKnown RBP9.33□□□□□ -0.92
AP003170.5-201ENST00000397185 TTBK1Q5TCY1 1321 aaPredicted RBP9.32□□□□□ -0.92
AP003170.5-201ENST00000397185 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
AP003170.5-201ENST00000397185 CUX1P39880 1505 aa9.31□□□□□ -0.92
AP003170.5-201ENST00000397185 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
AP003170.5-201ENST00000397185 MIER1Q8N108 512 aa9.29□□□□□ -0.92
AP003170.5-201ENST00000397185 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
AP003170.5-201ENST00000397185 FHAD1B1AJZ9 1412 aa9.28□□□□□ -0.92
AP003170.5-201ENST00000397185 ARHGAP35Q9NRY4 1499 aa9.26□□□□□ -0.93
AP003170.5-201ENST00000397185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
AP003170.5-201ENST00000397185 TIAM1Q13009 1591 aa9.24□□□□□ -0.93
AP003170.5-201ENST00000397185 EFCAB5A4FU69 1503 aa9.21□□□□□ -0.93
AP003170.5-201ENST00000397185 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
AP003170.5-201ENST00000397185 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.94
AP003170.5-201ENST00000397185 ERCC6Q03468 1493 aa9.21□□□□□ -0.94
AP003170.5-201ENST00000397185 CFAP43Q8NDM7 1665 aa9.2□□□□□ -0.94
AP003170.5-201ENST00000397185 IGF1RP08069 1367 aa9.2□□□□□ -0.94
AP003170.5-201ENST00000397185 SETD5Q9C0A6 1442 aa9.2□□□□□ -0.94
AP003170.5-201ENST00000397185 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
AP003170.5-201ENST00000397185 LHX8Q68G74 356 aa9.19□□□□□ -0.94
AP003170.5-201ENST00000397185 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
AP003170.5-201ENST00000397185 CARMIL1Q5VZK9 1371 aa9.19□□□□□ -0.94
AP003170.5-201ENST00000397185 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
AP003170.5-201ENST00000397185 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
AP003170.5-201ENST00000397185 CUL7Q14999 1698 aa9.17□□□□□ -0.94
AP003170.5-201ENST00000397185 FYCO1Q9BQS8 1478 aa9.16□□□□□ -0.94
AP003170.5-201ENST00000397185 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
AP003170.5-201ENST00000397185 RAB3GAP2Q9H2M9 1393 aa9.15□□□□□ -0.94
AP003170.5-201ENST00000397185 FGD5Q6ZNL6 1462 aa9.15□□□□□ -0.95
AP003170.5-201ENST00000397185 DNMBPQ6XZF7 1577 aa9.13□□□□□ -0.95
AP003170.5-201ENST00000397185 ABCA10Q8WWZ4 1543 aa9.13□□□□□ -0.95
AP003170.5-201ENST00000397185 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
AP003170.5-201ENST00000397185 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
AP003170.5-201ENST00000397185 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 C19orf67A6NJJ6 358 aa9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 CCER2I3L3R5 266 aa9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 GABBR2O75899 941 aa9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 THOC2Q8NI27 1593 aaKnown RBP9.12□□□□□ -0.95
AP003170.5-201ENST00000397185 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
AP003170.5-201ENST00000397185 FOXD4L1Q9NU39 408 aa9.11□□□□□ -0.95
AP003170.5-201ENST00000397185 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
AP003170.5-201ENST00000397185 SUPT16HQ9Y5B9 1047 aaKnown RBP9.09□□□□□ -0.95
AP003170.5-201ENST00000397185 KIF21AQ7Z4S6 1674 aa9.09□□□□□ -0.95
AP003170.5-201ENST00000397185 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
AP003170.5-201ENST00000397185 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
AP003170.5-201ENST00000397185 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
AP003170.5-201ENST00000397185 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
AP003170.5-201ENST00000397185 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
AP003170.5-201ENST00000397185 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
AP003170.5-201ENST00000397185 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
AP003170.5-201ENST00000397185 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
AP003170.5-201ENST00000397185 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
AP003170.5-201ENST00000397185 UACAQ9BZF9 1416 aa9.05□□□□□ -0.96
AP003170.5-201ENST00000397185 LAMC3Q9Y6N6 1575 aa9.04□□□□□ -0.96
AP003170.5-201ENST00000397185 NEFLP07196 543 aa9.04□□□□□ -0.96
AP003170.5-201ENST00000397185 TOPBP1Q92547 1522 aa9.04□□□□□ -0.96
AP003170.5-201ENST00000397185 HFM1A2PYH4 1435 aa9.04□□□□□ -0.96
AP003170.5-201ENST00000397185 ANP32CO43423 234 aa9.03□□□□□ -0.96
AP003170.5-201ENST00000397185 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
AP003170.5-201ENST00000397185 FGD6Q6ZV73 1430 aa9.03□□□□□ -0.96
AP003170.5-201ENST00000397185 AKNAQ7Z591 1439 aa9.03□□□□□ -0.96
AP003170.5-201ENST00000397185 SAMD9Q5K651 1589 aa9.03□□□□□ -0.96
AP003170.5-201ENST00000397185 WDR97A6NE52 1622 aa9.02□□□□□ -0.96
AP003170.5-201ENST00000397185 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
AP003170.5-201ENST00000397185 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
AP003170.5-201ENST00000397185 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.97
AP003170.5-201ENST00000397185 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms